Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021199
         (806 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81509-1|CAB04154.1|  332|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AF125959-3|AAD14731.1|  531|Caenorhabditis elegans Udp-glucurono...    28   6.8  
AC006795-2|AAF59493.3|  421|Caenorhabditis elegans Hypothetical ...    28   9.0  

>Z81509-1|CAB04154.1|  332|Caenorhabditis elegans Hypothetical
           protein F21A3.1 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 690 RAPWLILPVVICLSQRLSQHVSVQAY*GDTANGSIYQF 803
           R PWLIL   IC+   +  ++S+     D   G  YQF
Sbjct: 136 RRPWLILNYTICVVYMIPTYLSIP----DQKTGKAYQF 169


>AF125959-3|AAD14731.1|  531|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein14 protein.
          Length = 531

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 339 VRSVVYVILYVPCAILKFYSLKRIIIFHMVFLFKHYMF 452
           V+++VY +L+       F S K I+IF+ +F F H  F
Sbjct: 3   VKTLVYFLLFTG-----FISCKNILIFNPIFAFSHVKF 35


>AC006795-2|AAF59493.3|  421|Caenorhabditis elegans Hypothetical
           protein Y50D4B.6 protein.
          Length = 421

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 490 FCIIILSLKIKFSRIWIFIYL 552
           +CI++++L + F  +W F YL
Sbjct: 11  YCIVVIALSVLFYYVWKFYYL 31


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,935,229
Number of Sequences: 27780
Number of extensions: 294013
Number of successful extensions: 665
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)