Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021198
(733 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 115 8e-27
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 42 9e-05
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 41 2e-04
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 40 3e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 40 3e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 40 5e-04
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 37 0.003
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 34 0.024
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 33 0.032
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 33 0.032
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 32 0.097
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 32 0.097
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 31 0.22
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 29 0.68
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 29 0.90
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 29 0.90
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 1.2
SPAC630.05 |gyp7||GTPase activating protein Gyp7 |Schizosaccharo... 27 2.1
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 27 2.1
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 3.6
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 26 4.8
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 26 4.8
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 26 6.4
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 115 bits (276), Expect = 8e-27
Identities = 54/74 (72%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Frame = +3
Query: 510 VYLAASASAEFIADIALSPMEAAKVRIQTM-PGFASTLREAWPKMVKNEGYGTFYKGLVP 686
+YLAASASAE +ADI L PMEA KVR+QT P FA+T REAW K+V NEG+GT Y+GL P
Sbjct: 122 IYLAASASAELLADIMLCPMEAIKVRVQTSNPRFANTTREAWSKIVTNEGFGTLYRGLAP 181
Query: 687 LWGRQIPYTMMKFA 728
LW RQIPYTMMKFA
Sbjct: 182 LWFRQIPYTMMKFA 195
Score = 91.5 bits (217), Expect = 1e-19
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +1
Query: 253 STHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 432
+TH+A+ PLDL+KCR QV+ Y + GFK + +EG+RGL G PT IGYS+QG K
Sbjct: 36 TTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQGCGK 95
Query: 433 FGFYEVFKVAYAGMLDDETAYTY 501
+GFYE+FK Y+ ++ + A+ Y
Sbjct: 96 YGFYELFKHKYSTLVGAQKAHEY 118
Score = 29.1 bits (62), Expect = 0.68
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +2
Query: 173 AVPTESCEFGSPKYFALCGVGGVLSVG 253
A P ++ + +P+Y+ LC +GG+L+ G
Sbjct: 9 APPKKTLQLYTPQYYGLCTLGGLLACG 35
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 41.9 bits (94), Expect = 9e-05
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 453
P+ +VK R+ Y N GF ++ EG+RG G+AP+ +G S QG +F YE
Sbjct: 118 PIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVS-QGALQFMAYEKL 176
Query: 454 KV 459
K+
Sbjct: 177 KL 178
Score = 31.5 bits (68), Expect = 0.13
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 447
PL +++ RLQV +++++N + R +G+ G KG+ P + Q F YE
Sbjct: 206 PLLVIRTRLQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHLLRVVPQTCITFLVYE 263
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 40.7 bits (91), Expect = 2e-04
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = +1
Query: 256 THTAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 420
T A P+ LVK RLQ+D A +Y++ ++ ++R EG RGL KG + + +G +
Sbjct: 176 TSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGVG-E 234
Query: 421 GLCKFGFYEVFKVAYA 468
++ YE FK A A
Sbjct: 235 STLQWVLYEKFKHAVA 250
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 316 KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 450
KY ++ FK+ E+G+ GL G + FG YEV
Sbjct: 311 KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSYEV 355
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 244 VSRSTHTAVV-PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 420
+S +T TA+ P D++K R+Q++ YKN ++ K+ EG RG G+ + S+
Sbjct: 219 ISGATATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGFFLRVLRKSIS 278
Query: 421 GLCKFGFYE 447
+ YE
Sbjct: 279 STITWSVYE 287
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 40.3 bits (90), Expect = 3e-04
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Frame = +1
Query: 262 TAVVPLDLVKCRLQV-------DAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 414
T P +++K R Q+ D K YK+V F + R EG+RGL +G ++
Sbjct: 39 TLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQI 98
Query: 415 MQGLCKFGFYE-VFKVAYAGMLDD 483
C+ GFYE + + LDD
Sbjct: 99 CLNGCRLGFYEPIRRTLNTWFLDD 122
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKG 387
P LVK R+Q + K YK++ N F ++E GV+GL G
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVG 193
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 39.5 bits (88), Expect = 5e-04
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +3
Query: 501 PYLVYLAASASAEFIADIALSPMEAAKVRIQTMPGFA--STLREAWPKMVKNEGYGTFYK 674
P+ V AA A A + L P++ K R+Q G + + + K+VKNEG Y+
Sbjct: 7 PFPVTFAAGAVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYR 66
Query: 675 GLVPLWGRQIPYTMMKFA 728
G++P + P +KFA
Sbjct: 67 GILPPILMEAPKRALKFA 84
Score = 32.7 bits (71), Expect = 0.056
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Frame = +3
Query: 561 SPMEAAKVRIQTMPGFASTLRE---AWPKMV---KNEGYGTFYKGLVP 686
+P + K RIQT+P A + + A+P +V + EG+ YKG VP
Sbjct: 218 TPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVP 265
Score = 29.9 bits (64), Expect = 0.39
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 447
PLD+VK R+Q+ K Y + K V+ EG L +G P + + + KF +
Sbjct: 28 PLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASND 87
Query: 448 VF 453
+
Sbjct: 88 TY 89
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 36.7 bits (81), Expect = 0.003
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Frame = +1
Query: 268 VVPLDLVKCRLQVDAE--------KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 423
V LD + RL DA+ ++ +V+ ++ + R +G+RGL +G+ P+ +G +
Sbjct: 150 VYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYR 209
Query: 424 LCKFGFYEVFK-VAYAGMLD 480
FG Y+ K V G L+
Sbjct: 210 GLYFGMYDTLKPVVLVGPLE 229
Score = 29.1 bits (62), Expect = 0.68
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Frame = +1
Query: 262 TAVVPLDLVKCRLQVDAE---------KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 414
TA P++ VK +Q E +YK + FK + EEGV L +G + Y
Sbjct: 43 TAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYF 102
Query: 415 MQGLCKFGFYEVFK 456
F F + FK
Sbjct: 103 PTQALNFAFKDKFK 116
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 33.9 bits (74), Expect = 0.024
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Frame = +1
Query: 268 VVPLDLVKCRLQVDAEKY-----KN--VVNGFKVSVR----EEGVRGLAKGWAPTFIGYS 414
V PLD+VK R Q Y KN V+ G S+R EG+ GL +G P +GY
Sbjct: 23 VAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYL 82
Query: 415 MQGLCKFGFYEVFKVAY 465
F YE KV +
Sbjct: 83 PSWSIYFVVYEKCKVLF 99
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 319 YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFK 456
Y N + F+ + EG+ +G P+ G G+ +F YE FK
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGI-QFPLYEYFK 274
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 600 PGFASTLREAWPKMVKNEGYGTFYKGLVP 686
P + +T +A+ K+ K EG FY+GL P
Sbjct: 228 PAYNNTF-DAFRKIYKYEGLAAFYRGLFP 255
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +3
Query: 510 VYLAASASAEFIADIALSPMEAAKVRIQTM--PGFAST---LREAWPKMVKNEGYGTFYK 674
+ LAA+ S + A P E + R+Q++ P S +R+ W ++EG+ +Y
Sbjct: 289 IVLAATLS-KIAASTVTYPHEVLRTRLQSLDAPTHNSATLLIRDIW----RSEGWRKYYS 343
Query: 675 GLVPLWGRQIPYTMMKF 725
G+ + R IP + + F
Sbjct: 344 GMATNFIRTIPASSVTF 360
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 33.5 bits (73), Expect = 0.032
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 510 VYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEGYGTFYKGLVPL 689
+++ +++ E A I P E K R Q G S+ + N + FY G
Sbjct: 166 IHMCSASLGEIAACIVRVPTEVIKQRAQASGGTLSSRNILQTILKSNNVWRDFYAGYGIT 225
Query: 690 WGRQIPYTMMKF 725
R+IP+T+++F
Sbjct: 226 IAREIPFTLIQF 237
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 516 LAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEGYGTFYKGL 680
L A A D++L P++ K R+Q GF VKN G+ Y+GL
Sbjct: 86 LGAGICAGLAVDLSLFPIDTLKTRLQAKGGF-----------VKNGGFHGVYRGL 129
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 543 IADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEGYGTFYKGLVP--LW 692
IA +P + K RI T S + +V +EG+ YKG+VP LW
Sbjct: 271 IAAALTTPFDVVKTRIMTSQQRLSYVFTI-KSIVAHEGFLALYKGIVPRVLW 321
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.5 bits (73), Expect = 0.032
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 453
PLD +K R Q + + + F+ +V+ EG++GL +G I ++ F Y+
Sbjct: 37 PLDSIKVRQQT--YNFPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSL 94
Query: 454 KVAYA 468
K+ +A
Sbjct: 95 KLTFA 99
Score = 32.7 bits (71), Expect = 0.056
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 501 PYLVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEGYGTFYKGL 680
P + AA S+ I+++ P+++ KVR QT F T+R + VKNEG Y+GL
Sbjct: 17 PASTFSAALVSSA-ISNVIGYPLDSIKVRQQTY-NFP-TIRSCFQNAVKNEGLKGLYRGL 73
Query: 681 -VPL 689
+PL
Sbjct: 74 TLPL 77
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 31.9 bits (69), Expect = 0.097
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 564 PMEAAKVRIQTMPGFASTLREAWP---KMVKNEGYGTFYKGLV-PLWG 695
P + KVR+Q+ + A K+ KNEG FYKG V PL G
Sbjct: 37 PFDCVKVRLQSQSNVSPIYNNALDCVKKISKNEGLAAFYKGTVLPLLG 84
Score = 31.5 bits (68), Expect = 0.13
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +1
Query: 265 AVVPLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 432
A P D+VK ++Q D YKN K + G+RG +G+ P + +
Sbjct: 229 AAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVT 288
Query: 433 FGFYE 447
F YE
Sbjct: 289 FYVYE 293
Score = 29.5 bits (63), Expect = 0.52
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +3
Query: 528 ASAEFIADIALSPMEAAKVRIQTMPGFAS--TLREAWP---KMVKNEGYGTFYKGLVPLW 692
A A + +A P + K +IQT GF S T + +W + G FY+G VP+
Sbjct: 220 AGAGYAMWLAAYPFDIVKSKIQT-DGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVL 278
Query: 693 GRQIPYTMMKF 725
R P + F
Sbjct: 279 VRAAPANAVTF 289
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 31.9 bits (69), Expect = 0.097
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +3
Query: 522 ASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEGYGTFYKGLVPLWGRQ 701
A A A I+D ++P + K R+Q + + +NEG G FY
Sbjct: 119 AGACAITISDAFMTPFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFYISYPTCIAMS 178
Query: 702 IPYTMMKFA 728
IP+T ++ A
Sbjct: 179 IPFTAIQVA 187
Score = 29.9 bits (64), Expect = 0.39
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 238 CSVSRSTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 417
C+++ S + P D++K R+Q+ + KYK+ ++ R EG+ + PT I S+
Sbjct: 122 CAITISD-AFMTPFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFYISY-PTCIAMSI 179
Score = 29.5 bits (63), Expect = 0.52
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +1
Query: 259 HTAVVPLDLVKCRLQ----VDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 426
H+ + P+D +K R+Q V N+VN EGV L +G + +G
Sbjct: 34 HSVMYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHA 93
Query: 427 CKFGFYEVFK 456
F E FK
Sbjct: 94 IYFSVLEFFK 103
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 30.7 bits (66), Expect = 0.22
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 256 THTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKF 435
T + PLD++K ++ + E Y+ VV +E G+ G KG S+
Sbjct: 181 TAAVLTPLDVIKTQINLRPESYRKVVRRI---YKENGIFGFEKGLGLRVFASSLGLSIYL 237
Query: 436 GFYEVFK 456
G YE K
Sbjct: 238 GTYEHVK 244
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 29.1 bits (62), Expect = 0.68
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 390
PL+++K R Q+ + +V+N R EG++G +G+
Sbjct: 103 PLEVIKARTQISQKG--SVINTISTLARSEGLKGFYRGY 139
Score = 25.4 bits (53), Expect = 8.4
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 13/78 (16%)
Frame = +1
Query: 262 TAVVPLDLVKCRLQV-------------DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 402
T PLD+VK R QV AEK ++ K+ + GV+G +G
Sbjct: 189 TISTPLDIVKTRYQVATSSAMRKAEYGLQAEKELGILEIAKLLFSKHGVKGFTRGLFTRM 248
Query: 403 IGYSMQGLCKFGFYEVFK 456
G+ +E FK
Sbjct: 249 CYIMPSGMISMSVFESFK 266
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 28.7 bits (61), Expect = 0.90
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Frame = +3
Query: 507 LVYLAASASAEFIADIALSPMEAAKVRIQTM-----PGFAS-----TLREAWPKMVKNEG 656
L +L A + A + P E K R+Q P F S + R A ++ K EG
Sbjct: 111 LCFLLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQIAKQEG 170
Query: 657 YGTFYKGLVPLWGRQIPYT 713
TF+ G R IP++
Sbjct: 171 MKTFFYGYRATILRDIPFS 189
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 355 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 447
+ EG+ GL +G+ P S Q F FYE
Sbjct: 293 KSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.7 bits (61), Expect = 0.90
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1
Query: 271 VPLDLVKCRLQVDAEKYK 324
+P+DLV RL++DA++YK
Sbjct: 137 LPVDLVPIRLEIDADRYK 154
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -3
Query: 425 RPCIEYPMKVGA---HPLARPRTPSSRTDTLKPFTT 327
RP E P+ G HPL RP PSS + P++T
Sbjct: 154 RPLPETPVSPGGSLVHPLPRPPLPSSVSSHSSPYST 189
>SPAC630.05 |gyp7||GTPase activating protein Gyp7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -3
Query: 374 PRTPSSRTDTLKPFTTFLYFSASTWRRHFTRSRGTTAVWVDRLTEH 237
P TP S + PF L+ + T F+R VDRL EH
Sbjct: 245 PPTPRSSSSIFNPFRRALHDLSFTVLERFSRVTNYGKSEVDRLMEH 290
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = +3
Query: 564 PMEAAKVRIQTM-----PGFASTLREAWPKMVKNEGYGTFYKGLVP 686
P+ + R+QT P + + K KNEG+ YKGL P
Sbjct: 355 PLNVIRTRLQTQGTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSP 400
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 334 NGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 441
+ F++ + V G + W P + G+CK GF
Sbjct: 1105 SNFQIPMHVRSVHGWSCQWGPREDSMLLSGICKHGF 1140
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 26.2 bits (55), Expect = 4.8
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 238 CSVSRSTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFIGYS 414
C S T V PLD+VK RLQ ++ ++ + + + L KG AP +G
Sbjct: 32 CVGSVITTLTVTPLDVVKTRLQSES------ISQYSSTQPISSAKILGKGRPAPKPLGGP 85
Query: 415 MQGLCKFGFYEVFKVAYAGMLDDET 489
+ GL + +E + + G++ T
Sbjct: 86 VSGLYQIARHEGVRSLWRGLVPSLT 110
Score = 26.2 bits (55), Expect = 4.8
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Frame = +3
Query: 522 ASASAEFIADIALSPMEAAKVRIQTMPG---------FASTLREAWPKMVKNEGYGTFYK 674
A ASA I+ +SP+E + R+Q + G A+ + + M+ +G +
Sbjct: 142 AGASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANEVFDGLKLMIHQKGILNLWS 201
Query: 675 GL-VPLWGRQIPYT 713
G+ V LW R +P++
Sbjct: 202 GVSVTLW-RDVPFS 214
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 26.2 bits (55), Expect = 4.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKG 387
P+D V LQ YK+ + F R G++GL +G
Sbjct: 212 PVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGLYRG 249
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +1
Query: 262 TAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 405
T P D+++ R QV+ YKN+ + + EG+ G +G++ +
Sbjct: 242 TLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNML 294
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,720,072
Number of Sequences: 5004
Number of extensions: 49709
Number of successful extensions: 188
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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