Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021198
(733 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 140 1e-33
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 49 4e-06
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 45 6e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 44 1e-04
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.002
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 39 0.004
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.005
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 39 0.005
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 38 0.006
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.008
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.059
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.10
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.14
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 34 0.14
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.18
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.24
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.32
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.42
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.55
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 30 1.7
SB_52314| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 30 2.2
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 30 2.2
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 29 2.9
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.9
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 29 3.9
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) 28 6.8
SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11) 28 9.0
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 140 bits (338), Expect = 1e-33
Identities = 60/82 (73%), Positives = 73/82 (89%)
Frame = +1
Query: 256 THTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKF 435
THTAVVPLDLVKCR+QVD +KY ++VNGFK++++E+GVRGLA+GWAPTFIGYSMQGL KF
Sbjct: 69 THTAVVPLDLVKCRIQVDPKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSMQGLGKF 128
Query: 436 GFYEVFKVAYAGMLDDETAYTY 501
GFYEVFK+ Y ML +E +Y Y
Sbjct: 129 GFYEVFKIMYGNMLGEEYSYLY 150
Score = 78.2 bits (184), Expect = 6e-15
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +3
Query: 510 VYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEG 656
+YLAASASAEF ADIAL+PMEA KVRIQT PG+A TLRE PK++K EG
Sbjct: 154 LYLAASASAEFFADIALAPMEAVKVRIQTQPGWAGTLREGVPKLMKEEG 202
Score = 65.7 bits (153), Expect = 4e-11
Identities = 34/69 (49%), Positives = 42/69 (60%)
Frame = +2
Query: 47 MFSSLLDAARNSPFRGPLSPAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFALC 226
MFS + A+NS PLS A+C S V + + + ASAA SCEFGS KY+ALC
Sbjct: 1 MFSRYFETAKNSTLGDPLSVAKCPSDVR--SHRNSSRLMASAAGEQHSCEFGSAKYYALC 58
Query: 227 GVGGVLSVG 253
G GG+LS G
Sbjct: 59 GFGGILSCG 67
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 274 PLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 450
PLD+V+ RL + +KY ++N F R+EG+R +G+ PT IG F YE
Sbjct: 9 PLDMVRARLAITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYET 68
Query: 451 FKVAYAGMLD 480
K A+ D
Sbjct: 69 CKKAFGEFYD 78
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 564 PMEAAKVRIQ-TMPGFASTLREAWPKMVKNEGYGTFYKGLVPLWGRQIPYTMMKF 725
P++ + R+ T + L A+ ++ ++EG TFY+G VP +PY + F
Sbjct: 9 PLDMVRARLAITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISF 63
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 45.2 bits (102), Expect = 6e-05
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +1
Query: 274 PLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 441
PLD+V+ R+Q++ KY + +GFKV VR EG GL KG P + + +F
Sbjct: 701 PLDVVRRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPTIGIQFAV 760
Query: 442 YEVFKVA-YAGM 474
YEV K A YA M
Sbjct: 761 YEVSKSAMYARM 772
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Frame = +1
Query: 262 TAVVPLDLVKCRLQ-----VDAEK-YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 423
TAV P+DLVK R+Q ++AEK YKN ++ F VR EG GL +G P +G S +
Sbjct: 929 TAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEK 988
Query: 424 LCK 432
K
Sbjct: 989 AIK 991
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 256 THTAVVPLDLVKCRLQVDAEKYK--NVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 429
+ TA PLD +K LQV A +V+GFK+ +RE G++ L +G I + +
Sbjct: 150 SRTATAPLDRLKVLLQVQASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIAPESGI 209
Query: 430 KFGFYEVFK 456
KF YE K
Sbjct: 210 KFFAYEKAK 218
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 253 STHTAVVPLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 429
++ T++ PL+++K RL + +Y+ +++ V ++EG+R +G P+ +G
Sbjct: 243 ASQTSIYPLEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGI 302
Query: 430 KFGFYEVFKVAYAGMLDDETA 492
YE K Y +++A
Sbjct: 303 DLAVYETLKNFYLNYHKNQSA 323
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Frame = +1
Query: 238 CSVSRST--HTAVVPLDLVKCRLQVDAEKY-----KNVVNGFKVSVREEGVRGLAKGWAP 396
C + ST A PL LV+ RLQ A + N+V+ + + E+G +GL +G AP
Sbjct: 333 CGTASSTCGQLASYPLSLVRTRLQAQAREKGGGQGDNMVSVLRKIITEDGFKGLYRGLAP 392
Query: 397 TFI 405
F+
Sbjct: 393 NFL 395
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +3
Query: 516 LAASASAEFIADIALSPMEAAKVRIQTMP-GFASTLREAWPKMVKNEGYGTFYKGLVPLW 692
L A + A + ++ P+E K R+ G L A + + EG +FY+GL P
Sbjct: 234 LLAGSMAGVASQTSIYPLEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSL 293
Query: 693 GRQIPYTMMKFA 728
IPY + A
Sbjct: 294 LGIIPYAGIDLA 305
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 262 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 402
T P D++K R+ + Y+ V F ++V EG+ L KGW PT+
Sbjct: 316 TISTPADVIKTRIMNNPSGYQGAVECFMLAVHREGLLSLYKGWLPTW 362
Score = 35.1 bits (77), Expect = 0.059
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 504 YLVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEGYGTFYKGLV 683
++V+ +S + +A +P + K RI P E + V EG + YKG +
Sbjct: 300 WIVHSMSSVCSGLVAATISTPADVIKTRIMNNPSGYQGAVECFMLAVHREGLLSLYKGWL 359
Query: 684 PLWGRQI 704
P W R +
Sbjct: 360 PTWTRML 366
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEKY--------KNVVNGFKVSVREEGVRGLAKGWAP 396
P DLVK ++Q++ + + + F+ V + G RGL KGW P
Sbjct: 151 PTDLVKVQMQMEGRRLSFYPISSVRGTFHAFRNIVDKYGFRGLWKGWLP 199
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 447
P +L+K RLQV + Y ++ F +R EGVRGL KG+ + G G C YE
Sbjct: 35 PANLIKIRLQVQRKTTLYNGSLDAFTKVIRTEGVRGLYKGYLVSCAGL-FAGQCYITTYE 93
Query: 448 VFK 456
+ +
Sbjct: 94 LVR 96
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +1
Query: 253 STHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGV-RGLAKGWAPTFIGYS 414
++ T PLD+V+ R+Q+ D KY +N F E+G+ RGL +G + ++
Sbjct: 119 TSQTLAYPLDVVRRRMQLAGTVADGHKYSTCINTFISVYTEDGIRRGLYRGLSINYLRVC 178
Query: 415 MQGLCKFGFYEVFK 456
Q F YEV K
Sbjct: 179 PQVAVMFAVYEVVK 192
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Frame = +3
Query: 513 YLAASASAEFIADIALSPMEAAKVRIQTM------PGFASTLREAWPKMVKNEGYGTFYK 674
+ AS + +A P++ AK RIQ M P + T+ + ++V+NEG +K
Sbjct: 96 HFGASMISGLATTVASMPVDIAKTRIQNMRIIDGKPEYKGTM-DVLARIVRNEGVFALWK 154
Query: 675 GLVPLWGRQIPYTMMKF 725
G P + R P+T++ F
Sbjct: 155 GFTPYYFRIGPHTVLTF 171
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +1
Query: 253 STHTAVVPLDLVKCRLQ----VDAE-KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 417
+T A +P+D+ K R+Q +D + +YK ++ VR EGV L KG+ P +
Sbjct: 106 ATTVASMPVDIAKTRIQNMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGP 165
Query: 418 QGLCKFGFYE 447
+ F F E
Sbjct: 166 HTVLTFIFLE 175
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Frame = +3
Query: 501 PYLVY-LAASASAEFIADIALSPMEAAKVRIQTM------PGFASTLREAWPKMVKNEGY 659
P L+Y L A A A +A++P++ K R+Q + P + + + K+ NEG
Sbjct: 203 PPLIYCLGAGCLAGMTASVAVNPLDVIKTRLQLLNRPQGEPNYNGII-DCAKKIYSNEGL 261
Query: 660 GTFYKGLVP 686
FYKG VP
Sbjct: 262 AAFYKGAVP 270
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = +1
Query: 238 CSVSRSTHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 402
C + AV PLD++K RLQ+ Y +++ K EG+ KG P
Sbjct: 213 CLAGMTASVAVNPLDVIKTRLQLLNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRM 272
Query: 403 I 405
I
Sbjct: 273 I 273
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Frame = +1
Query: 256 THTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGVR-GLAKGWAPTFIGYSM 417
+ T PLD+V+ R+Q+ D KY +N +++G+R GL +G + ++
Sbjct: 186 SQTIAYPLDVVRRRMQLAGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGLSINYLRVCP 245
Query: 418 QGLCKFGFYEVFK 456
Q FG YEV K
Sbjct: 246 QVAIMFGVYEVTK 258
Score = 35.1 bits (77), Expect = 0.059
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +1
Query: 274 PLDLVKCRL--QVDAEK-YKNVVNGFK-VSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 441
PLD+V+ RL QV ++ Y + + +SV+E G + L KG+ PT + ++ GF
Sbjct: 84 PLDMVRSRLAFQVAQDQGYTTITQTIRCISVKEGGPKALYKGFVPTLL--TIVPAMGIGF 141
Query: 442 YEVFKVAYAGMLDDETAYT 498
Y +F+ A L+ A+T
Sbjct: 142 Y-MFETMKAYFLETRIAFT 159
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +1
Query: 256 THTAVVPLDLVKCRLQVDAEK----YKNVVNGFKVSVREEGVRGLAKGWAPTFI 405
+ TA PLD+V+ R+Q+ + YK+ ++ F V+ EG RGL KG P +
Sbjct: 175 SQTATYPLDVVRRRMQMKGIRADFAYKSTLHAFSSIVKLEGFRGLYKGMWPNIL 228
Score = 34.3 bits (75), Expect = 0.10
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 256 THTAVVPLDLVKCRLQVDAE--KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 429
+ T+V PL+ VK LQ+ + K+K V+ +EEG+ G KG I
Sbjct: 48 SRTSVSPLERVKILLQIQVKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSAV 107
Query: 430 KFGFYEVFKVAYA 468
+F YE +K A
Sbjct: 108 QFAAYEEYKKGIA 120
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 35.1 bits (77), Expect = 0.059
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +1
Query: 268 VVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFIG 408
V P +++K RL V YK + + K +REEG+ L KG P+F+G
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLG 221
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 35.1 bits (77), Expect = 0.059
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 295 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 450
R + DA +K GF ++ +EEG L K T YS++GL KF FYEV
Sbjct: 909 RTKPDATDKVYGEFQGFNITYKEEGGGTLYKTADHTKRSYSIKGLKKFTFYEV 961
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 34.7 bits (76), Expect = 0.078
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 9/71 (12%)
Frame = +3
Query: 522 ASASAEFIADIALSPMEAAKVRIQT---------MPGFASTLREAWPKMVKNEGYGTFYK 674
A + A F L P E K R+Q M G S + + ++++N+G+ ++
Sbjct: 112 AGSGAAFFMSFVLCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFR 171
Query: 675 GLVPLWGRQIP 707
G+ W R++P
Sbjct: 172 GMTATWAREVP 182
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 564 PMEAAKVRIQTMPGFASTLREAWPKMVKNEGYGTFYKGLVP 686
P + KV++QT P + + K K EG+ Y G +P
Sbjct: 29 PFDTIKVKMQTFPSMSKNALDCGIKTFKQEGFKGLYAGTIP 69
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 444
P D +K ++Q KN ++ + ++EG +GL G P+ + F FY
Sbjct: 29 PFDTIKVKMQTFPSMSKNALDCGIKTFKQEGFKGLYAGTIPSLAANIAENSFLFLFY 85
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Frame = +3
Query: 510 VYLAASASAEFIADIALSPMEAAKVRIQTMPG--------FASTLREAWPKMVKNEGYGT 665
++LA++ A F+A SP++ + R T P + TL + K V++EG
Sbjct: 213 LHLASALVAGFVATCVASPVDIVRTRFMTQPKDTKGRPLVYQGTL-DCIYKTVRHEGILA 271
Query: 666 FYKGLVPLWGR 698
YKG P W R
Sbjct: 272 LYKGFFPNWTR 282
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 15/76 (19%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEK--------------YKNVVN-GFKVSVREEGVRGLAKGWAPTFIG 408
P+++VK R+Q+D E YK ++ G REEGVRGL +G P +
Sbjct: 26 PIEVVKIRMQLDNELGSKHNSKDIFRERYYKGLIRTGLSRVYREEGVRGLYRGIFPALLR 85
Query: 409 YSMQGLCKFGFYEVFK 456
++ + G YE K
Sbjct: 86 QAIYSSTRLGAYEPIK 101
Score = 31.1 bits (67), Expect = 0.96
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 274 PLDLVKCRLQV----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPT 399
P DLVK R Q + YKN+ + F ++EG GL G PT
Sbjct: 134 PTDLVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPT 179
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEK-------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 432
P+D+V+ R + Y+ ++ +VR EG+ L KG+ P + + +
Sbjct: 231 PVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTRTGLDTIII 290
Query: 433 FGFYEVFKVAYAGM 474
F YE + YAG+
Sbjct: 291 FFVYERLR-RYAGL 303
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 516 LAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEGYGTFYKGLVPLWG 695
+ A+A IA + + P+ K R ++ +++R+A + NEG Y GLV
Sbjct: 433 IVLGATARTIAGVCMMPVTVVKTRYESGNFNYTSMRQALVSIWTNEGGRGLYSGLVATVA 492
Query: 696 RQIPYT 713
R P++
Sbjct: 493 RDAPFS 498
Score = 31.5 bits (68), Expect = 0.73
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 238 CSVSRSTHTAVV--PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGY 411
C + +VV P D+VK RLQ++ Y + + G+ GL +G P +
Sbjct: 529 CGIMAGAMASVVTQPADVVKTRLQMNPYMYPSNRAAVVAIIEAGGIEGLFRGLVPRTVRR 588
Query: 412 SMQGLCKFGFYE 447
++ + YE
Sbjct: 589 TLMSAMAWTIYE 600
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 33.9 bits (74), Expect = 0.14
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Frame = +1
Query: 226 RSWWCSVSRSTHTAVV---PLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLA 381
R W + ST A+V P +++K RL V YK + + K +REEG+ L
Sbjct: 422 RDWSLVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALY 481
Query: 382 KGWAPTFI 405
KG P+F+
Sbjct: 482 KGVTPSFL 489
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +1
Query: 253 STHTAVVPLDLVKCRLQVD----AEKYKNVVNGFKVSVREEGVRGLAKGWAPT 399
+T + PLD VKC LQ++ Y V+ + RE GVRG+ KG + T
Sbjct: 150 ATSFVLTPLDRVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
Score = 31.5 bits (68), Expect = 0.73
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +3
Query: 522 ASASAEFIADIALSPMEAAKVRIQTMP----GFASTLREAWP---KMVKNEGYGTFYKGL 680
A ++A A++ P++ KVR+Q MP G + ++ K+++NEG ++G+
Sbjct: 44 AGSAAGAAANLVGFPLDTIKVRLQAMPLPKPGEPWMYKNSFDCFFKIIRNEGVYYLFRGV 103
Query: 681 -VPLWGRQIPYTMMKFAC 731
VP+ IP T + F+C
Sbjct: 104 TVPILN-SIPNTTVLFSC 120
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEKYKNVVN--GFKVSVR----EEGVRGLAKGWAPTFIGYSMQGLCKF 435
PLD+V+ RL V +++ N G ++R EEG+RGL KG P+ + + +
Sbjct: 48 PLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSLVSIAPFLGVQQ 107
Query: 436 GFYEVFKV 459
Y++ K+
Sbjct: 108 SVYDIMKL 115
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEKYKNVVNGFKVSVR----EEGVRGLAKGWAPTFI 405
P + +KC LQV+A + +G V+ EEGVRG+ +G PT I
Sbjct: 140 PAERIKCILQVEAGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMI 187
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Frame = +1
Query: 274 PLDLVKCRLQV-------DAEKYKNVVNGFKVSVREEGVRGLAKG 387
PLDL+K RLQ + +K ++ F +VR EG+RGL KG
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 11/55 (20%)
Frame = +1
Query: 268 VVPLDLVKCRLQVDA-----------EKYKNVVNGFKVSVREEGVRGLAKGWAPT 399
++P D++K R+QV ++Y V + F+ ++EEG GL KG AP+
Sbjct: 47 ILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKGLAPS 101
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 516 LAASASAEFIADIALSPMEAAKVRIQTMPG-FASTLREAWPKMVKNEGYGTFYKGLVPLW 692
+AAS + +A P E K+R Q G + S + ++ +NEG +KG+ P
Sbjct: 128 IAASITTGIMAVSVAQPTEVVKIRFQADAGRYTSGTMGTYAEIARNEGMKGLWKGVFPNM 187
Query: 693 GR 698
R
Sbjct: 188 AR 189
Score = 29.5 bits (63), Expect = 2.9
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 17/89 (19%)
Frame = +3
Query: 507 LVYLAASASAEFIADIALSPMEAAKVRIQ------TMPGFASTLREAWPK---------- 638
LV ++ A IA+ A P++ AKVR+Q M A +R
Sbjct: 15 LVKFCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMV 74
Query: 639 -MVKNEGYGTFYKGLVPLWGRQIPYTMMK 722
+ K EG T YKGL+P RQ+ + ++
Sbjct: 75 TLFKTEGMKTMYKGLIPGIHRQLCFASIR 103
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 259 HTAVVPLDLVKCRLQVDAEKYKNVVNGFKV---SVREEGVRGLAKGWAPTFIGYSMQGLC 429
HT PL +K RLQ++ + + FK+ + + EG+R +G +++G S + +
Sbjct: 849 HTVTNPLWFIKTRLQLENQGGTR-ASAFKIVSMAYKAEGIRAFYRGLTASYVGIS-ETVV 906
Query: 430 KFGFYEVFK 456
F YE K
Sbjct: 907 HFTIYERLK 915
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 262 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFI 405
TA PLD +K RLQ A ++ +V+ EGVRGL KG AP +
Sbjct: 85 TAGQPLDTIKVRLQ--ASFGAGPLDMLARTVKTEGVRGLYKGMLAPVLV 131
>SB_52314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 507 LVYLAASASAEFIADIALSPMEAAKVRIQT--MPGFASTLREAWPKMVKNEGYGTFYKGL 680
+VYL + ASA+ + +P+ K R+Q G L + EG FYKGL
Sbjct: 846 MVYLVSGASAQIVNSTITNPLWFLKTRLQLDFKCGREVKLARVVRQAYATEGIRAFYKGL 905
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = +3
Query: 522 ASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEGYGTFYKGLVPLWGRQ 701
A A A D A++P+E K R+Q + + K EG FY+
Sbjct: 3 AGACATVFHDGAMNPIEVIKQRLQMYGSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMN 62
Query: 702 IPYTMMKF 725
IP+ + F
Sbjct: 63 IPFQTLHF 70
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 265 AVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 390
A+ P++++K RLQ+ Y+ V++ +EEG+R + +
Sbjct: 14 AMNPIEVIKQRLQMYGSPYRGVIHCATSVFKEEGIRAFYRSY 55
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 9/53 (16%)
Frame = +3
Query: 564 PMEAAKVRIQTMPG--------FASTLREAWPKMVKNEGYGTFYKGL-VPLWG 695
P++ KVR+QTMP F T + K ++NEG+ YKG+ P+ G
Sbjct: 46 PLDTIKVRLQTMPRPKPGEKPMFTGTF-DCAMKTIRNEGFFGLYKGMAAPITG 97
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEK---------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 426
PL++VK R+Q+ E Y+NV + + EG+ + KG P I +
Sbjct: 24 PLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGILAMQKGLFPALIYQVIMNG 83
Query: 427 CKFGFYEV 450
+ G Y++
Sbjct: 84 TRLGSYQI 91
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +1
Query: 274 PLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 426
P D++K R+Q D +YK +++ S +EEG+ +G PT + +Q L
Sbjct: 152 PFDVIKSRIQADGNLGKFRYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGFLQVL 206
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 201 PNSQDSVGTAADAAMPPVCSIATGATVDWHWAGD-SGPRNGEFRAASSNEENIIM 40
P Q T A PPV +G+ D W GD S P+ + R+ N +M
Sbjct: 398 PQPQKPPATRPSATPPPVTGDESGSDYDEDWGGDWSEPKPTQSRSIVGEMRNDLM 452
>SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 115 PVDGRARGYRADRWHGGVCCG 177
P +G+ RG+R GGVCCG
Sbjct: 91 PREGQIRGFRFVHISGGVCCG 111
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Frame = +1
Query: 274 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 429
P+DL K ++QV + Y+NV + + G+RG +G + T +
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 430 KFGFYEVFK 456
FGFYE K
Sbjct: 281 FFGFYEFTK 289
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 113 CQSTVAPVAIEQTGGMAASAAVPTES 190
C ST PV +QT A+SA VPT S
Sbjct: 154 CLSTARPVTTQQTKKPASSAFVPTTS 179
>SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 376 LAKGWAPTFIGYSMQGLCKFGFYEVFKV 459
L KGW T ++M G K+G E+ K+
Sbjct: 123 LLKGWGATSFEHAMIGAAKYGHIEIVKL 150
>SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)
Length = 1644
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2
Query: 44 IMFSSLLDAARNSPFRGPLSPAQCQ--STVAPVAIEQTGGMAASAAVPTESCEFGSPKYF 217
+ SL++ + + + P+ PA + VA + G +A + + + +F S
Sbjct: 470 VTLGSLIELSEANVSKSPVFPAIAEHLKVVANTPVRNVGSIAGNMMLAHDHSDFPSDIMT 529
Query: 218 ALCGVGGVLSVGRPTRP 268
+ G+G + VG+ + P
Sbjct: 530 IMEGIGASVIVGKSSTP 546
>SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 58 VARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVCCGTHGVL 192
+ RCG + W +P P++GR R W G C +L
Sbjct: 338 IRRCGTH-APGWMVGRQPSPIEGRVRRTVCFNWAGNCCKWRQNIL 381
>SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11)
Length = 155
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 295 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 450
R + DA +K GF ++ +EEG L K T + GL KF +YEV
Sbjct: 78 RTKPDATDKIYGEFQGFNITYKEEGGGTLYKTTNHTTRSCIITGLKKFTYYEV 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,988,652
Number of Sequences: 59808
Number of extensions: 451935
Number of successful extensions: 1353
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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