Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021197
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   9.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   9.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.1  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = -3

Query: 367 TSSPFPQ---NLASSSMPSSCMTVESTSKQTQSAVLNNS 260
           TS+P P    ++AS S  SS MT  +T+     +V + S
Sbjct: 266 TSAPSPATYGDIASPSSASSAMTTPATTSSPTGSVYDYS 304


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = -3

Query: 367 TSSPFPQ---NLASSSMPSSCMTVESTSKQTQSAVLNNS 260
           TS+P P    ++AS S  SS MT  +T+     +V + S
Sbjct: 266 TSAPSPATYGDIASPSSASSAMTTPATTSSPTGSVYDYS 304


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 417  ALKKRLDIIRPNVGQIREFIEKFPVRLTPGIQS 515
            + K+R   +R     ++E   ++PVR T  IQS
Sbjct: 1422 SFKRRSLKLRRGAKDLKEVENEYPVRRTDSIQS 1454


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,407
Number of Sequences: 2352
Number of extensions: 13365
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)