Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021197
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical... 93 2e-19
AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical ... 93 2e-19
AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical... 88 6e-18
AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical... 88 6e-18
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 35 0.063
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 33 0.15
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 33 0.15
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 33 0.19
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 31 0.59
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.78
Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z92967-1|CAB07477.1| 220|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 29 4.2
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 4.2
U10401-5|AAA19060.1| 238|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z92790-3|CAB07228.1| 383|Caenorhabditis elegans Hypothetical pr... 28 5.5
U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family ... 28 5.5
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 28 7.3
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 28 7.3
AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical ... 28 7.3
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 7.3
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 27 9.6
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 27 9.6
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 27 9.6
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 27 9.6
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 27 9.6
>AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical
protein Y62E10A.13b protein.
Length = 279
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/87 (49%), Positives = 60/87 (68%)
Frame = +3
Query: 252 DVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKR 431
+V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F++AL R
Sbjct: 48 EVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALAAR 107
Query: 432 LDIIRPNVGQIREFIEKFPVRLTPGIQ 512
L +++PN Q+ +F+ +LT GI+
Sbjct: 108 LQVMKPNHEQLEQFVNISKPKLTVGIR 134
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = +2
Query: 512 ELVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLKF 646
ELV LH RG VYLVSGGFR LI PVAE L I I+AN + F
Sbjct: 135 ELVSRLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILF 179
>AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical
protein Y62E10A.13a protein.
Length = 276
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/87 (49%), Positives = 60/87 (68%)
Frame = +3
Query: 252 DVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKR 431
+V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F++AL R
Sbjct: 45 EVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALAAR 104
Query: 432 LDIIRPNVGQIREFIEKFPVRLTPGIQ 512
L +++PN Q+ +F+ +LT GI+
Sbjct: 105 LQVMKPNHEQLEQFVNISKPKLTVGIR 131
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = +2
Query: 512 ELVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLKF 646
ELV LH RG VYLVSGGFR LI PVAE L I I+AN + F
Sbjct: 132 ELVSRLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILF 176
>AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical
protein Y62E10A.13d protein.
Length = 282
Score = 87.8 bits (208), Expect = 6e-18
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Frame = +3
Query: 252 DVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTF--QEALK 425
+V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F ++AL
Sbjct: 49 EVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDALA 108
Query: 426 KRLDIIRPNVGQIREFIEKFPVRLTPGIQ 512
RL +++PN Q+ +F+ +LT GI+
Sbjct: 109 ARLQVMKPNHEQLEQFVNISKPKLTVGIR 137
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = +2
Query: 512 ELVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLKF 646
ELV LH RG VYLVSGGFR LI PVAE L I I+AN + F
Sbjct: 138 ELVSRLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILF 182
>AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical
protein Y62E10A.13c protein.
Length = 265
Score = 87.8 bits (208), Expect = 6e-18
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Frame = +3
Query: 252 DVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTF--QEALK 425
+V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F ++AL
Sbjct: 32 EVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDALA 91
Query: 426 KRLDIIRPNVGQIREFIEKFPVRLTPGIQ 512
RL +++PN Q+ +F+ +LT GI+
Sbjct: 92 ARLQVMKPNHEQLEQFVNISKPKLTVGIR 120
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = +2
Query: 512 ELVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLKF 646
ELV LH RG VYLVSGGFR LI PVAE L I I+AN + F
Sbjct: 121 ELVSRLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILF 165
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 34.7 bits (76), Expect = 0.063
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = -3
Query: 385 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASS 206
S V+ T+SP ASS+ PSS T+ STS T + ++ S T+ A+S+ + V S
Sbjct: 1500 STVASSTASP----AASSTAPSSTGTMSSTSSGTVGSTISESSTTASASSQTGSTVTMGS 1555
Query: 205 TSRTAG 188
+S T+G
Sbjct: 1556 SS-TSG 1560
Score = 34.3 bits (75), Expect = 0.084
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = -3
Query: 388 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRAS 209
+SA S + SS ASS+ PSS T+ STS T + ++ S T+ TS + V
Sbjct: 1745 SSAGSTVVSST-ASPAASSTAPSSTGTMSSTSSGTVGSTMSQSSTAASTTSHTGSTVTLG 1803
Query: 208 STSRTAGCFSNCKEPS 161
S+S ++ S + S
Sbjct: 1804 SSSTSSNQMSTSQGSS 1819
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -3
Query: 400 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STP 221
L P S +S LTS P P + SS S+ T Q+ S++ +++ + ++ T
Sbjct: 689 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTT 748
Query: 220 VRASSTSRTAGCFSNCKEPS 161
+ + S S + G P+
Sbjct: 749 MTSPSQSSSVGSSQGSTSPA 768
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = -3
Query: 385 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASS 206
S+V +S +++S++PSS T+ STS T + ++ S T+ A+S+ + V S
Sbjct: 1818 SSVGSTVASSTAGLVSTSTVPSSTGTMGSTSSGTVGSTISESSTTASASSQTGSTVTMGS 1877
Query: 205 TSRTAG 188
+S T+G
Sbjct: 1878 SS-TSG 1882
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = -3
Query: 343 LASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASSTSRT 194
+++S++PSS T+ STS T + ++ S T+ +S+ + V STS T
Sbjct: 1915 VSTSTVPSSTGTMGSTSSGTVGSTISESSTAASTSSQTGSTVTIGSTSGT 1964
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = -3
Query: 343 LASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASSTSRTAG 188
+++S++PSS T+ STS T + ++ S T+ A+S+ + V S+S T+G
Sbjct: 1593 VSTSTVPSSTGTMGSTSSGTVGSTISESSTTASASSQTGSTVTMGSSS-TSG 1643
Score = 31.1 bits (67), Expect = 0.78
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = -3
Query: 343 LASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASSTSRTAG 188
+++S++PSS T+ STS T + ++ S T+ A+S+ + V S+S T+G
Sbjct: 1676 VSTSTVPSSTGTMGSTSSGTVGSTISESSTAASASSQTGSTVTMGSSS-TSG 1726
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -3
Query: 364 SSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASSTS 200
SSP P +L+ S+ S +T E + TQS+ ++ T+ ST SSTS
Sbjct: 682 SSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTS 736
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -3
Query: 400 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STP 221
L P S +S LTS P P + SS S+ T Q+ S++ +++ + ++ T
Sbjct: 482 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTT 541
Query: 220 VRASSTSRTAGCFSNCKEPS 161
+ + S S + G P+
Sbjct: 542 MTSPSQSSSVGSSQGSTSPA 561
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -3
Query: 364 SSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASSTS 200
SSP P +L+ S+ S +T E + TQS+ ++ T+ ST SSTS
Sbjct: 475 SSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTS 529
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 33.5 bits (73), Expect = 0.15
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -3
Query: 400 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STP 221
L P S +S LTS P P + SS S+ T Q+ S++ +++ + ++ T
Sbjct: 689 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTT 748
Query: 220 VRASSTSRTAGCFSNCKEPS 161
+ + S S + G P+
Sbjct: 749 MTSPSQSSSVGSSQGSTSPA 768
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -3
Query: 364 SSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASSTS 200
SSP P +L+ S+ S +T E + TQS+ ++ T+ ST SSTS
Sbjct: 682 SSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTS 736
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 400 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTS-KQTQSAVLNNSWTSVEATSR*ST 224
+PP S S T P S+ P+S T +T+ K T S + S T+ TS +T
Sbjct: 583 VPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
Query: 223 PVRASSTSRTA 191
+T+ T+
Sbjct: 643 TTPQPTTTTTS 653
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 400 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTS-KQTQSAVLNNSWTSVEATSR*ST 224
+PP S S T P S+ P+S T +T+ K T S + S T+ TS +T
Sbjct: 583 VPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
Query: 223 PVRASSTSRTA 191
+T+ T+
Sbjct: 643 TTPQPTTTTTS 653
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 31.5 bits (68), Expect = 0.59
Identities = 13/51 (25%), Positives = 29/51 (56%)
Frame = -1
Query: 156 CFFSE*RNYYDRIHFNLIY*LRYYLSFVKVTSVIMKDPLCGKYDEHASVEC 4
C+++E NY++ N + Y+ SF + + I+++ L GK+++ + C
Sbjct: 1502 CYWNEGMNYWETDCGNFYGAIIYFCSFYLIITYIVRNLLVGKFEKLTIINC 1552
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = -3
Query: 367 TSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASSTS 200
++SP S++ PS+ T S+S T S+ ++S +S ++++ ST + SST+
Sbjct: 482 STSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTT 537
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = -3
Query: 481 FSMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVE 302
FSM + PTL M N I S + T++ +++++P+S TV
Sbjct: 245 FSMRTSGSPTLRRMKRDAGDNTCDYTIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTV- 303
Query: 301 STSKQTQSAVLNNSWTSVEATSR*STPVRASSTSRTA 191
+T+ T ++ + S T++E+TS T ++STS T+
Sbjct: 304 TTAMSTSTSTPSTS-TTIESTSTTFTSTASTSTSSTS 339
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = -3
Query: 385 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASS 206
+ V TS+ S+S PS+ T+ESTS T ++ + S +S T + S+ + +S
Sbjct: 294 TTVPTSTSTVTTAMSTSTSTPSTSTTIESTS-TTFTSTASTSTSSTSTTQQSSSTITSSP 352
Query: 205 TSRT 194
+S T
Sbjct: 353 SSTT 356
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -3
Query: 418 ASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEAT 239
AS + P ++ + ++SP + SSS S+ +T ++++ T ++ + TS A
Sbjct: 437 ASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAP 496
Query: 238 SR*ST-PVRASST-SRTA 191
S +T P +SST S TA
Sbjct: 497 STSTTGPSSSSSTPSSTA 514
Score = 28.7 bits (61), Expect = 4.2
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -3
Query: 505 PGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLTSSPFPQNLASSSM 326
P +LT + + S P+ + +S S + + + S+ S T+ P + S+S
Sbjct: 428 PTTTLTTSTASTSTTEPSTSTVTTS----PSTSPVTSTVTSSSSSSTTVTTPTSTESTST 483
Query: 325 -PSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASST 203
PSS +T +T+ T + ++S ++ +T+ S ASST
Sbjct: 484 SPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASST 525
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/56 (30%), Positives = 33/56 (58%)
Frame = -3
Query: 367 TSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASSTS 200
++SP S++ PS+ T S+S T S+ ++S +S ++++ ST + SST+
Sbjct: 482 STSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTT 537
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/97 (27%), Positives = 48/97 (49%)
Frame = -3
Query: 481 FSMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVE 302
FSM + PTL M N I S + T++ +++++P+S TV
Sbjct: 245 FSMRTSGSPTLRRMKRDAGDNTCDYTIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTV- 303
Query: 301 STSKQTQSAVLNNSWTSVEATSR*STPVRASSTSRTA 191
+T+ T ++ + S T++E+TS T ++STS T+
Sbjct: 304 TTAMSTSTSTPSTS-TTIESTSTTFTSTASTSTSSTS 339
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = -3
Query: 385 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASS 206
+ V TS+ S+S PS+ T+ESTS T ++ + S +S T + S+ + +S
Sbjct: 294 TTVPTSTSTVTTAMSTSTSTPSTSTTIESTS-TTFTSTASTSTSSTSTTQQSSSTITSSP 352
Query: 205 TSRT 194
+S T
Sbjct: 353 SSTT 356
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -3
Query: 418 ASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEAT 239
AS + P ++ + ++SP + SSS S+ +T ++++ T ++ + TS A
Sbjct: 437 ASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAP 496
Query: 238 SR*ST-PVRASST-SRTA 191
S +T P +SST S TA
Sbjct: 497 STSTTGPSSSSSTPSSTA 514
Score = 28.7 bits (61), Expect = 4.2
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -3
Query: 505 PGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLTSSPFPQNLASSSM 326
P +LT + + S P+ + +S S + + + S+ S T+ P + S+S
Sbjct: 428 PTTTLTTSTASTSTTEPSTSTVTTS----PSTSPVTSTVTSSSSSSTTVTTPTSTESTST 483
Query: 325 -PSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASST 203
PSS +T +T+ T + ++S ++ +T+ S ASST
Sbjct: 484 SPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASST 525
>Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical protein
F46C5.6 protein.
Length = 986
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = -3
Query: 391 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRA 212
+ S+ S ++S+ F L+SSS+PSS + S + SA +S+TS + S R+
Sbjct: 895 MTSSTSSISSNSFTSPLSSSSLPSSGYGLR-RSATSSSAFAGSSYTSTSSYS--LMNARS 951
Query: 211 SSTSRTAG 188
SS R G
Sbjct: 952 SSNIRRPG 959
>Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical protein
F46C5.6 protein.
Length = 986
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = -3
Query: 391 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRA 212
+ S+ S ++S+ F L+SSS+PSS + S + SA +S+TS + S R+
Sbjct: 895 MTSSTSSISSNSFTSPLSSSSLPSSGYGLR-RSATSSSAFAGSSYTSTSSYS--LMNARS 951
Query: 211 SSTSRTAG 188
SS R G
Sbjct: 952 SSNIRRPG 959
>Z92967-1|CAB07477.1| 220|Caenorhabditis elegans Hypothetical
protein T25E12.4b protein.
Length = 220
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 129 NSFVTRRRSNRDGSLQFEKQPAVRDVEDALTGVDQRDVASTDVQELFRTADCV 287
+S +T R+ R GS + +V D E A + +AST + L R ADC+
Sbjct: 101 SSTITVERTRRGGSTASSEPDSVADSEGAGSYSSFSSIASTASRMLGRAADCL 153
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 28.7 bits (61), Expect = 4.2
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = -3
Query: 511 CIPGVSLTGN-FSM--NSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLTSSP--FPQ 347
C+ +LTG+ +S N + PTLG SS + PP+ + LT S F
Sbjct: 1219 CLNSATLTGSSYSSCSNGVWTPTLGSCTSS--GTGTGPCYTPPLTPVGATLTYSSGYFAP 1276
Query: 346 NLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASSTSRT 194
A S+ SC ++ + S N++W+ + S+ +AS+T+ T
Sbjct: 1277 WTAGSTATMSCPAGQTVIGTSISYCTNSAWSPALGSCSGSSVGQASTTTTT 1327
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 340 ASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASSTS 200
+SS PSS +TV +T + +A S TS + + S+ + STS
Sbjct: 784 SSSQAPSSTVTVPTTGTTSGAASTTGSITSTQQATSTSSVITTGSTS 830
>U10401-5|AAA19060.1| 238|Caenorhabditis elegans Hypothetical
protein T20B12.7 protein.
Length = 238
Score = 28.7 bits (61), Expect = 4.2
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +3
Query: 210 DALTGVD-QRDVASTDVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAE 386
D GV R V S R AD + DV+ +IQ + + LA+ C +V + E
Sbjct: 24 DGTNGVKGTRVVGSVSNARELRGADSLVGDVERAIIQVQETELLAEVCNTVFDVMKQNGE 83
Query: 387 AMGGNMTFQEALKKRLDIIRPNVGQIREFIEKFPVR 494
+ + A +K +R ++ E +FPVR
Sbjct: 84 VIVFSQDLTTAQRK----LRIAGFRVTEVAAEFPVR 115
>Z92790-3|CAB07228.1| 383|Caenorhabditis elegans Hypothetical
protein H03G16.4 protein.
Length = 383
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 156 NRDGSLQFEKQPAVRDVEDALTGVDQRDVASTDVQELFRTA--DCVCFDVDSTVIQDEGI 329
NRDGS + R E +TG D ++A D + + + D V ++D Q+
Sbjct: 141 NRDGSCYVQCDTGARGDEKEVTGGDHLEMAVNDFCNMIKGSKHDLVKVELD---FQNCSP 197
Query: 330 DELAKFC 350
DE KFC
Sbjct: 198 DEHDKFC 204
>U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family
protein 1 protein.
Length = 652
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 360 DEVKRLTAEAMGGNMTFQEALKKRLDIIRPN 452
D+VK +T E M GNM + RLD+ P+
Sbjct: 385 DDVKMITGEEMKGNMADFSDILTRLDLAPPS 415
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 364 SSPFPQNLASSS-MPSSCMTVESTSKQTQSAVLNNS 260
SSP L++SS +PS T +S Q QS V NNS
Sbjct: 831 SSPSSTRLSNSSNIPSCFATPDSPDSQLQSFVSNNS 866
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -3
Query: 367 TSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASSTS 200
TS+ ++ + + T STS T S + + TS +++ S P+RA TS
Sbjct: 518 TSTTTSSTTSTEASTPTTSTSTSTSTSTPSTTTSTTSTSTTSSTSSSAPIRAVRTS 573
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 364 SSPFPQNLASSS-MPSSCMTVESTSKQTQSAVLNNS 260
SSP L++SS +PS T +S Q QS V NNS
Sbjct: 831 SSPSSTRLSNSSNIPSCFATPDSPDSQLQSFVSNNS 866
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 297 VDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRPNVGQIRE 470
+D+ + E L K KG+E+ R AEA G ++ +KKR++ + + GQIR+
Sbjct: 1766 IDTELASHEPQVSLVKL--KGEELLRSAAEAGVG----EDQIKKRMEDLEQSWGQIRD 1817
>AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical
protein ZK185.5 protein.
Length = 352
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 91 PQSVNKIEVNSIIIVSLL-GEEATEMALYSLKSNLQYATLKTLSLVSISVM 240
P+ N++E+ +II S+L G T + + S++S L+ +++ +IS+M
Sbjct: 134 PRGRNRLELVGVIICSILMGISNTLLVMESIRSILEGDINPVMNITTISIM 184
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -3
Query: 397 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPV 218
PP +S + T++ S+ PSS T T+ T TS E+ S +TPV
Sbjct: 203 PPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPET-----TSTESPSSSTTPV 257
Query: 217 RASSTS 200
+ ++T+
Sbjct: 258 QTTTTT 263
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -3
Query: 397 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPV 218
PP +S + T++ S+ PSS T T+ T TS E S +TPV
Sbjct: 226 PPSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPET-----TSTEPPSSSTTPV 280
Query: 217 RASSTS 200
+ ++T+
Sbjct: 281 QTTTTT 286
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -3
Query: 397 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPV 218
PP +S + T++ S+ PSS T T+ T TS E S +TPV
Sbjct: 502 PPSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPET-----TSTEPPSSSTTPV 556
Query: 217 RASSTS 200
+ ++T+
Sbjct: 557 QTTTTT 562
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 367 TSSPFPQNLA-SSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRASSTSRTA 191
T +P P + + S+S +S T STS ++ + + S T+ STP +S + T+
Sbjct: 87 TDTPIPTHSSPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTTTTATSTPTSSSKATTTS 146
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -3
Query: 325 PSSCMTVESTSKQTQSAVLNNSWTSVEATSR---*STPVRASSTSRTAGCFS 179
PS+ + STS+ T SA L ++ ++ +TS+ ST R +S T+G S
Sbjct: 913 PSTPLETASTSQSTPSATLTSTTENIPSTSKIPETSTTQRPTSPILTSGATS 964
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 27.5 bits (58), Expect = 9.6
Identities = 29/71 (40%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Frame = -3
Query: 388 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSV-------EATSR* 230
A S +T+S P N +S S S T E TS T + V +S TSV E TS
Sbjct: 186 ADPTSTITTSTTP-NPSSPSTVQSTTTAEPTSTITSTTVPESSTTSVVQSTTTAEPTSTI 244
Query: 229 -STPVRASSTS 200
ST V SSTS
Sbjct: 245 TSTTVPESSTS 255
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = -3
Query: 406 VILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*S 227
V +PPIA S +P P++ S S + T STS + V S +S SR S
Sbjct: 10 VNIPPIAKTRSTSHLAPTPEHHRSVSYEDT--TTASTSTDSVPEVRIRSESS--QVSRES 65
Query: 226 TPVRAS 209
P+RAS
Sbjct: 66 PPIRAS 71
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = -3
Query: 406 VILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*S 227
V +PPIA S +P P++ S S + T STS + V S +S SR S
Sbjct: 10 VNIPPIAKTRSTSHLAPTPEHHRSVSYEDT--TTASTSTDSVPEVRIRSESS--QVSRES 65
Query: 226 TPVRAS 209
P+RAS
Sbjct: 66 PPIRAS 71
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.5 bits (58), Expect = 9.6
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = -3
Query: 391 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTSVEATSR*STPVRA 212
+AS+ TSS ++ASSS PS TV + S T + V + TS T+
Sbjct: 489 VASSTIAPTSSQESSSIASSSAPSQSTTVITVS--TTATVSSGQSTSTFGTTIGQGSSFG 546
Query: 211 SSTSRT 194
SST +T
Sbjct: 547 SSTIQT 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,373,858
Number of Sequences: 27780
Number of extensions: 271142
Number of successful extensions: 1042
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -