Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021196
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    25   0.52 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    25   0.52 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          25   0.52 
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    24   1.2  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   4.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.4  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = -2

Query: 413 IEQFLTVH--TLHIAIVQGIRVVFSVGITILFEILRIVSDAHFTAQKIHFREISFRCTRY 240
           ++ + T H  TLH  I   ++ V+++   I    LRI         K  +   SF  T Y
Sbjct: 7   VKSYFTTHHDTLH-NIYTSMKPVYAICKLIGLNTLRIGRKGELKQHKSDYFYFSFYITSY 65

Query: 239 T-IKVFSYIR 213
           T + V+S  R
Sbjct: 66  TLLSVYSLFR 75


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = -2

Query: 413 IEQFLTVH--TLHIAIVQGIRVVFSVGITILFEILRIVSDAHFTAQKIHFREISFRCTRY 240
           ++ + T H  TLH  I   ++ V+++   I    LRI         K  +   SF  T Y
Sbjct: 7   VKSYFTTHHDTLH-NIYTSMKPVYAICKLIGLNTLRIGRKGELKQHKSDYFYFSFYITSY 65

Query: 239 T-IKVFSYIR 213
           T + V+S  R
Sbjct: 66  TLLSVYSLFR 75


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +3

Query: 24  EPLSDFNFETNKSTSNKDFLTRNNTNKYVKTLNCVPNK 137
           +P  +FN++ N++ SN +      + +Y +  NCV  K
Sbjct: 228 DPQFNFNYQYNQAYSNYNNYQEGFSCQYYQGKNCVGGK 265


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +3

Query: 24  EPLSDFNFETNKSTSNKDFLTRNNTNKYVKTLNCV 128
           +P  +FN++ N++ SN +      + +Y +  NCV
Sbjct: 208 DPQFNFNYQYNQAYSNYNNYQEGFSCQYYQGKNCV 242


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 336 YTNGKYHTDALNDSDMKSVYGEELFNKL 419
           YTN  YH +   + + KS   EEL + +
Sbjct: 219 YTNTIYHQENFENYEPKSPEDEELLDAI 246


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 393 YGEELFNKLHILPDPLMKNLGDTLAMIMTEVKKSRVKRINWW 518
           Y  E F  L +L   ++  LG++  ++   V KSR  R+N++
Sbjct: 45  YKTEQFTVLWVLFTMIV--LGNSAVLVALLVSKSRKSRMNFF 84


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 422 YTTRSIDEESW*HISHDYDRSEKVKSQEDK 511
           Y     + E W +I  DYDR  ++    DK
Sbjct: 326 YNVEYKNVEFWRNIREDYDRLARLTQFLDK 355


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,868
Number of Sequences: 336
Number of extensions: 3546
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)