Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021196
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   2.4  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   7.5  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   9.9  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   9.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   9.9  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
 Frame = +3

Query: 6   TFIVTME---PLSDFNFETNKSTSNKDFLTRNNTNKYVKTLNCVPNKDLFNLNSDCCVAF 176
           TF++ M+     S  N  TNK+ +    L       + K  NC      + +  D C   
Sbjct: 74  TFVIIMKFNGVPSSLNVITNKTGNGGPLLAPYPDWTWAKNENCSGITSAYKIEIDMCDRL 133

Query: 177 W 179
           W
Sbjct: 134 W 134


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 189 CRYPHRPSPDIRKDFNSVSCATKRNFSKMNF 281
           CR       D +K +  V C  K+N  K  F
Sbjct: 112 CRNEEYTGDDCQKTYQYVQCHYKQNPEKFFF 142


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 523 STLSGITGFFSGMMSTLAGVMFRSRNRQI 609
           STLSG+ G   G    L G+   ++ + I
Sbjct: 137 STLSGLEGELKGTFYPLTGMSKETQQKLI 165


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/45 (20%), Positives = 20/45 (44%)
 Frame = +3

Query: 447 NLGDTLAMIMTEVKKSRVKRINWWRIDSIGYNWVF*RYDEHSRWR 581
           N+   +A I  ++ K        +  D +GY  +   ++++  WR
Sbjct: 185 NMNTFIANIAVDLGKGGCNDAFAYMSDELGYGLIVYSWEQNRSWR 229


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 523 STLSGITGFFSGMMSTLAGVMFRSRNRQI 609
           STLSG+ G   G    L G+   ++ + I
Sbjct: 153 STLSGLEGELKGTFYPLTGMSKETQQKLI 181


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,927
Number of Sequences: 438
Number of extensions: 4280
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)