Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021195
         (566 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           23   6.9  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           23   6.9  

>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 193 TEVVENGPVSITAAVNTTT 249
           T  V +GPV+ T + +TTT
Sbjct: 66  TTTVASGPVTTTGSTDTTT 84


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 6.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 193 TEVVENGPVSITAAVNTTT 249
           T  V +GPV+ T + +TTT
Sbjct: 76  TTTVASGPVTTTGSTDTTT 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.128    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,600
Number of Sequences: 2352
Number of extensions: 4813
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53404389
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)