Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021195
         (566 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p...    31   2.8  
AC002044-1|AAC31674.1| 1190|Homo sapiens Alpha-fetoprotein enhan...    31   2.8  

>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
           protein protein.
          Length = 3703

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 360 PPSFRASQAAPRAQQWTSERDVEHVGGERVECHERDSAAHNTASLKSMAQ 509
           PP  R   A+   ++   E DVE++ GE V  ++ D +A+   SL  + Q
Sbjct: 105 PPPLREESASDTGEEGDEESDVENLAGEIV--YQPDGSAYIVESLSQLTQ 152


>AC002044-1|AAC31674.1| 1190|Homo sapiens Alpha-fetoprotein enhancer
           binding protein (3' partial) protein.
          Length = 1190

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 360 PPSFRASQAAPRAQQWTSERDVEHVGGERVECHERDSAAHNTASLKSMAQ 509
           PP  R   A+   ++   E DVE++ GE V  ++ D +A+   SL  + Q
Sbjct: 105 PPPLREESASDTGEEGDEESDVENLAGEIV--YQPDGSAYIVESLSQLTQ 152


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.312    0.128    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,804,543
Number of Sequences: 237096
Number of extensions: 747460
Number of successful extensions: 1433
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)