Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021194
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.0  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   3.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +3

Query: 423 QKEIQTIKESYVTEDKLNEIK 485
           +K+ +TIKE Y  +++LN+ K
Sbjct: 263 KKKKKTIKEKYTEDEELNKTK 283


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 652 CLPPRVNNKVARSG 611
           CL PR+N+K+  SG
Sbjct: 21  CLDPRLNSKIQVSG 34


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 88  NIVICEVLAFIQNKIDV 138
           N+V+  VL  +QNK+++
Sbjct: 241 NVVVTSVLKLMQNKLEI 257


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 356  LQISSHKSWS*FRVSFFKKTDNIK 285
            L + +H SW+ F   F+K+    K
Sbjct: 1442 LIVKAHDSWADFDNQFYKRVTGYK 1465


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,880
Number of Sequences: 336
Number of extensions: 3020
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)