Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021194
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin ... 31 0.79
Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical pr... 31 1.0
U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical ... 30 1.8
Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical pr... 29 4.2
U13070-10|AAC46644.3| 294|Caenorhabditis elegans Hypothetical p... 29 4.2
U13070-9|AAU05578.1| 388|Caenorhabditis elegans Hypothetical pr... 29 4.2
U13070-8|AAN84828.1| 433|Caenorhabditis elegans Hypothetical pr... 29 4.2
AB079783-1|BAB84821.1| 433|Caenorhabditis elegans endo-beta-N-a... 29 4.2
Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical pr... 28 5.6
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 28 5.6
AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical ... 28 5.6
AC006730-4|ABO16461.1| 254|Caenorhabditis elegans Hypothetical ... 28 5.6
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical ... 27 9.8
AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5 prot... 27 9.8
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 27 9.8
AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical ... 27 9.8
>AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin
homologous protein 1 protein.
Length = 930
Score = 31.1 bits (67), Expect = 0.79
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +1
Query: 76 CSNCNIVICEVLAFIQNKIDVMSEDSLV--RICSTSFSVEEIENAKSLLFESVTTSKRKR 249
C NC V+CE + +N+ V+ E V R C + + E L S TT+
Sbjct: 845 CRNCGRVVCEDCS--KNRFSVIEEGKSVQKRACDSCYDSMH-ETDLKLSSSSTTTTSSST 901
Query: 250 TREGKAECIAIFLMLSVFLK 309
E + + ++L +FLK
Sbjct: 902 KIENDSNVPGLIIILIMFLK 921
>Z68005-1|CAA91991.1| 1199|Caenorhabditis elegans Hypothetical protein
F59F3.5 protein.
Length = 1199
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/87 (24%), Positives = 40/87 (45%)
Frame = +3
Query: 153 FGAYMFNVFLRGRN*KC*KPFV*ICDDFKTKENTRREGRMHRDLFDVISLFKETDPELTP 332
+G ++ +F G P + + KT +R H+D++ ++ + + P+ P
Sbjct: 1090 YGICLYEIFTLGGTPYPDCPNFSLVEYIKTGNINKRPSNCHKDVYKIMKMCWQASPDDRP 1149
Query: 333 TFVARDLQKLPPVHFDHLDATKLLKDI 413
TF + KL H + A+KLL+ I
Sbjct: 1150 TFA--ECIKLFKNHIQYF-ASKLLQQI 1173
>U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical
protein T07F8.1 protein.
Length = 822
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 459 TEDKLNEIKNELYNLKRHL**IITSIYITPKSH 557
T+D LN+ L NLKR++ + S+ +TPK H
Sbjct: 724 TDDDLNDFAKTLKNLKRNIRILHPSMGVTPKLH 756
>Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical protein
VT23B5.2 protein.
Length = 931
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 19 RCCCCLVTHRTKMTTRILKCSNCNIVICEVLAFIQNKIDVMSEDSLVRICSTSFS-VEEI 195
RC C H+ + R C NC + C + ++ I M+ VR+C F +++
Sbjct: 868 RCDDC--EHKFTLADRKHHCRNCGQIFCSTCSRFESHITRMNISRPVRVCRKCFQRLQQS 925
Query: 196 ENAKSL 213
N +L
Sbjct: 926 SNLHNL 931
>AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 19 RCCCCLVTHRTKMTTRILKCSNCNIVICEVLAFIQNKIDVMSEDSLVRICSTSFS-VEEI 195
RC C H+ + R C NC + C + ++ I M+ VR+C F +++
Sbjct: 868 RCDDC--EHKFTLADRKHHCRNCGQIFCSTCSRFESHITRMNISRPVRVCRKCFQRLQQS 925
Query: 196 ENAKSL 213
N +L
Sbjct: 926 SNLHNL 931
>Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical
protein F15A2.3 protein.
Length = 336
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = -1
Query: 320 RVSFFKKTDNIKKIAMHSAFPSRVLFRFEVVTDSNKRLLAFSISSTEKDVEHIRTKL 150
+V+F KK + + S FP+ V+ F+++TDSN ++ D +++ L
Sbjct: 123 KVNFKKKHKHATTFIIFSFFPT-VMLLFQLLTDSNFAIVEAETREMHPDYDYVNNAL 178
>U13070-10|AAC46644.3| 294|Caenorhabditis elegans Hypothetical
protein F01F1.10a protein.
Length = 294
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 118 IQNKIDVMSEDSLVRICS--TSFSVEEIENAKSLLFESV 228
I+NKID D L++ CS T S + EN+K + ++SV
Sbjct: 153 IENKIDAGKIDLLIQFCSSLTEKSKKMNENSKVIWYDSV 191
>U13070-9|AAU05578.1| 388|Caenorhabditis elegans Hypothetical
protein F01F1.10c protein.
Length = 388
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 118 IQNKIDVMSEDSLVRICS--TSFSVEEIENAKSLLFESV 228
I+NKID D L++ CS T S + EN+K + ++SV
Sbjct: 108 IENKIDAGKIDLLIQFCSSLTEKSKKMNENSKVIWYDSV 146
>U13070-8|AAN84828.1| 433|Caenorhabditis elegans Hypothetical
protein F01F1.10b protein.
Length = 433
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 118 IQNKIDVMSEDSLVRICS--TSFSVEEIENAKSLLFESV 228
I+NKID D L++ CS T S + EN+K + ++SV
Sbjct: 153 IENKIDAGKIDLLIQFCSSLTEKSKKMNENSKVIWYDSV 191
>AB079783-1|BAB84821.1| 433|Caenorhabditis elegans
endo-beta-N-acetylglucosaminidase protein.
Length = 433
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 118 IQNKIDVMSEDSLVRICS--TSFSVEEIENAKSLLFESV 228
I+NKID D L++ CS T S + EN+K + ++SV
Sbjct: 153 IENKIDAGKIDLLIQFCSSLTEKSKKMNENSKVIWYDSV 191
>Z66564-8|CAM84731.1| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 376 KCTGGNFCKSLATKVGVNSGSVSLKRLITSKRSRCIR 266
KC G+F KS+ +K + + V+ + + RSRCIR
Sbjct: 19 KCVFGHFGKSVKSKRQLGNKLVATCKRYSQYRSRCIR 55
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 254 RVLFRFEVVTDSNKRLLAFSISSTEKDVEHIRTKL 150
R+ FE++TDS R I S ++++E ++ KL
Sbjct: 815 RMSVEFELMTDSMSRQSKEQIESKDREIEELKAKL 849
>AL032659-3|CAA21749.2| 892|Caenorhabditis elegans Hypothetical
protein Y71H9A.1 protein.
Length = 892
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 376 KCTGGNFCKSLATKVGVNSGSVSLKRLITSKRSRCIR 266
KC G+F KS+ +K + + V+ + + RSRCIR
Sbjct: 19 KCVFGHFGKSVKSKRQLGNKLVATCKRYSQYRSRCIR 55
>AC006730-4|ABO16461.1| 254|Caenorhabditis elegans Hypothetical
protein Y27F2A.10 protein.
Length = 254
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 143 VKTVWCVYVQRLSPWKKLKMLKAFCLNL*RLQNER 247
++ ++CV V ++ W KMLKA L + ++Q +R
Sbjct: 118 MEALFCVTVAVITTWDMFKMLKALQLRVSKIQLQR 152
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 163 ICSTSFSVEEIENAKSLLFESVTTSKRKRTREGKAE 270
+ S+S EE++N K L + K+KR+++ + E
Sbjct: 830 VASSSAEQEELKNLKKKLLNKLNKEKKKRSKKSRFE 865
>AL590342-2|CAC35859.3| 685|Caenorhabditis elegans Hypothetical
protein Y66A7A.5 protein.
Length = 685
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 285 FDVISLFKETDPELTPTFVARDLQKLPPVHFDH 383
FD+I F+ +PE P V +L KL P+ D+
Sbjct: 242 FDLIEDFEPPEPEPEPEQVDTELVKLEPIDGDY 274
>AL032622-4|CAA21499.1| 738|Caenorhabditis elegans Y66A7A.5
protein.
Length = 738
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 285 FDVISLFKETDPELTPTFVARDLQKLPPVHFDH 383
FD+I F+ +PE P V +L KL P+ D+
Sbjct: 242 FDLIEDFEPPEPEPEPEQVDTELVKLEPIDGDY 274
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 234 FKTKENTRREGRMHRDLFDVISLFKETD 317
F+T TR R DLFD IS FKE D
Sbjct: 398 FQTFILTRALPRRKHDLFDEISCFKELD 425
>AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical
protein Y32G9A.6 protein.
Length = 840
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +1
Query: 109 LAFIQNKIDVMSEDSLVRIC----STSFSVEEIENAKSLLFESVTTSKRKRTREGKAE 270
LA QN + V+ + L ++C S FS E IEN K+ FE++ R++ E KAE
Sbjct: 386 LATKQNHVVVV--EYLTKLCRAKSSKEFSPEYIENWKT-NFEAMVAEARRKRNELKAE 440
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,597,159
Number of Sequences: 27780
Number of extensions: 288519
Number of successful extensions: 937
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -