Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021193
         (767 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069266-1|AAL39411.1|  384|Drosophila melanogaster GM08106p pro...    33   0.57 
AE014296-3403|AAF51631.2|  384|Drosophila melanogaster CG13252-P...    33   0.57 
AY226540-1|AAO47366.1|  573|Drosophila melanogaster pickpocket 7...    30   4.0  
AE014134-1078|AAF52370.2|  573|Drosophila melanogaster CG9499-PA...    30   4.0  

>AY069266-1|AAL39411.1|  384|Drosophila melanogaster GM08106p
           protein.
          Length = 384

 Score = 32.7 bits (71), Expect = 0.57
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +3

Query: 96  TNKYVKTLNCVPNKDLFNLNSDCCVAFWGKCCRYPHRPSPD 218
           T  +   LNC P++    L   CC   W KC   PH    D
Sbjct: 224 TMSFCGNLNC-PSEQQVMLKDTCCPVCWPKCAPMPHEKQDD 263


>AE014296-3403|AAF51631.2|  384|Drosophila melanogaster CG13252-PA
           protein.
          Length = 384

 Score = 32.7 bits (71), Expect = 0.57
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +3

Query: 96  TNKYVKTLNCVPNKDLFNLNSDCCVAFWGKCCRYPHRPSPD 218
           T  +   LNC P++    L   CC   W KC   PH    D
Sbjct: 224 TMSFCGNLNC-PSEQQVMLKDTCCPVCWPKCAPMPHEKQDD 263


>AY226540-1|AAO47366.1|  573|Drosophila melanogaster pickpocket 7
           protein.
          Length = 573

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
 Frame = +3

Query: 165 CVAFWGKCCRYPHRPSPD--IRKDFNSVSCATKRNFSKMNFLSREMRIRHDPQYFKQNCY 338
           C+A       Y H P     +R  F  +SC   RN   +N++S        P  +  N Y
Sbjct: 383 CLAEHNDLLIYSHNPGEKEFVRNQFQGMSCKCFRNCYSLNYISDVRPAFLPPDVYANNSY 442

Query: 339 TNGKYH 356
            +   H
Sbjct: 443 VDLDVH 448


>AE014134-1078|AAF52370.2|  573|Drosophila melanogaster CG9499-PA
           protein.
          Length = 573

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
 Frame = +3

Query: 165 CVAFWGKCCRYPHRPSPD--IRKDFNSVSCATKRNFSKMNFLSREMRIRHDPQYFKQNCY 338
           C+A       Y H P     +R  F  +SC   RN   +N++S        P  +  N Y
Sbjct: 383 CLAEHNDLLIYSHNPGEKEFVRNQFQGMSCKCFRNCYSLNYISDVRPAFLPPDVYANNSY 442

Query: 339 TNGKYH 356
            +   H
Sbjct: 443 VDLDVH 448


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,121,950
Number of Sequences: 53049
Number of extensions: 750123
Number of successful extensions: 2039
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2038
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)