Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021193
(767 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 3.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 3.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 3.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 3.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 3.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 3.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 3.1
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 23 3.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 3.1
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 9.5
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.5
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 21 9.5
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 648 KSDYKNILNITDKNTEH 698
+ + KNILN T++ TEH
Sbjct: 173 REEIKNILNKTNEITEH 189
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 648 KSDYKNILNITDKNTEH 698
+ + KNILN T++ TEH
Sbjct: 173 REEIKNILNKTNEITEH 189
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 648 KSDYKNILNITDKNTEH 698
+ + KNILN T++ TEH
Sbjct: 173 REEIKNILNKTNEITEH 189
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 648 KSDYKNILNITDKNTEH 698
+ + KNILN T++ TEH
Sbjct: 173 REEIKNILNKTNEITEH 189
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 648 KSDYKNILNITDKNTEH 698
+ + KNILN T++ TEH
Sbjct: 173 REEIKNILNKTNEITEH 189
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 648 KSDYKNILNITDKNTEH 698
+ + KNILN T++ TEH
Sbjct: 173 REEIKNILNKTNEITEH 189
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 648 KSDYKNILNITDKNTEH 698
+ + KNILN T++ TEH
Sbjct: 173 REEIKNILNKTNEITEH 189
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 23.0 bits (47), Expect = 3.1
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = +3
Query: 6 TFIVTME---PLSDFNFETNKSTSNKDFLTRNNTNKYVKTLNCVPNKDLFNLNSDCCVAF 176
TF++ M+ S N TNK+ + L + K NC + + D C
Sbjct: 74 TFVIIMKFNGVPSSLNVITNKTGNGGPLLAPYPDWTWAKNENCSGITSAYKIEIDMCDRL 133
Query: 177 W 179
W
Sbjct: 134 W 134
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 648 KSDYKNILNITDKNTEH 698
+ + KNILN T++ TEH
Sbjct: 173 REEIKNILNKTNEITEH 189
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.4 bits (43), Expect = 9.5
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +1
Query: 553 SGMMSTLAGVMFRSRNRQISIQGHCHKPGRIPKVTTKTFLISRTKTPNT 699
SG S +G RN + I H PG I ++K K P T
Sbjct: 35 SGQRSVSSGFRSSLRNYKTLISSHDELPGHINCDSSKFEEDLMNKLPTT 83
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 666 CFCSHFWNPARFVAVSLDRYLTVS 595
C S +N VA+S+DRY+ V+
Sbjct: 269 CSTSSIFN---LVAISIDRYIAVT 289
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = +3
Query: 189 CRYPHRPSPDIRKDFNSVSCATKRNFSKMNF 281
CR D +K + V C K+N K F
Sbjct: 112 CRNEEYTGDDCQKTYQYVQCHYKQNPEKFFF 142
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,233
Number of Sequences: 438
Number of extensions: 5448
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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