Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021193
         (767 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g27020.1 68416.m03380 oligopeptide transporter OPT family pro...    32   0.37 
At1g09050.1 68414.m01009 expressed protein                             30   2.0  
At4g31020.2 68417.m04406 expressed protein                             29   2.6  
At4g31020.1 68417.m04405 expressed protein                             29   2.6  
At5g40410.1 68418.m04901 pentatricopeptide (PPR) repeat-containi...    29   3.4  
At5g67460.1 68418.m08505 glycosyl hydrolase family protein 17 si...    28   7.9  
At5g08260.1 68418.m00971 serine carboxypeptidase S10 family prot...    28   7.9  
At2g37020.1 68415.m04540 translin family protein similar to SP|Q...    28   7.9  

>At3g27020.1 68416.m03380 oligopeptide transporter OPT family
           protein similar to iron-phytosiderophore transporter
           protein yellow stripe 1 [Zea mays] GI:10770865; contains
           Pfam profile PF03169: OPT oligopeptide transporter
           protein
          Length = 676

 Score = 32.3 bits (70), Expect = 0.37
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = +3

Query: 345 GKYHTDALNDSDMKSVYGEELFNKLHILPDPLMKNLGDTLAMNMTEVKKSRVKRIN 512
           G ++   L  +D K +YG ++F  + I+    + NL   +A+ + E+  SR +R+N
Sbjct: 301 GDWYPADLGSNDFKGLYGYKVFIAIAIILGDGLYNLVKIIAVTVKELCSSRSRRLN 356


>At1g09050.1 68414.m01009 expressed protein
          Length = 916

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +3

Query: 258 RNFSKMNFLSREMRIRHDPQYFKQNCYTNGKYHT--DALNDSDMKSVYGEELFN 413
           +NF++MN       I     ++    Y + KYHT  ++    + K VYG +L++
Sbjct: 163 KNFTQMNNFMENKGIGEIMLFYYGKFYNSAKYHTWSESRKKRNRKCVYGRKLYS 216


>At4g31020.2 68417.m04406 expressed protein
          Length = 294

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -1

Query: 386 LHIAIVQGIRVVFSVGITILFEILR 312
           LH AI+ GIRV++ V +T+ F+I +
Sbjct: 168 LHSAILSGIRVLYPVKMTLWFDIFK 192


>At4g31020.1 68417.m04405 expressed protein
          Length = 294

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -1

Query: 386 LHIAIVQGIRVVFSVGITILFEILR 312
           LH AI+ GIRV++ V +T+ F+I +
Sbjct: 168 LHSAILSGIRVLYPVKMTLWFDIFK 192


>At5g40410.1 68418.m04901 pentatricopeptide (PPR) repeat-containing
            protein contains Pfam profile PF01535: PPR repeat
          Length = 1155

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -1

Query: 410  EQFLTVHTLHIAIVQGIRVVFSVGITILFEILRIVSDAHFTAQKIHFRE 264
            E+ +  H+  IA+  G+ VV  +   I+ + LRI  D H TA+ I   E
Sbjct: 1081 EEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIE 1129


>At5g67460.1 68418.m08505 glycosyl hydrolase family protein 17
           similar to beta-1,3-glucanase GI:6714534 from [Salix
           gilgiana]
          Length = 380

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 18/49 (36%), Positives = 20/49 (40%)
 Frame = +3

Query: 189 CRYPHRPSPDIRKDFNSVSCATKRNFSKMNFLSREMRIRHDPQYFKQNC 335
           C YP          FNS    TKRN    +F    M I  DP Y  Q+C
Sbjct: 329 CYYPDTVMAHASYAFNSYWQKTKRNGGTCSFGGTAMLITTDPSY--QHC 375


>At5g08260.1 68418.m00971 serine carboxypeptidase S10 family protein
           similar to Serine carboxypeptidase II chains A and B
           (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
           carboxypeptidase D - Triticum aestivum, PIR:A29639
          Length = 480

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 327 QNCYTNGKYHTDALNDSDMKSVY 395
           + CY N K   DA ND D+ S+Y
Sbjct: 268 EQCYNNFKGFMDAYNDIDIYSIY 290


>At2g37020.1 68415.m04540 translin family protein similar to
           SP|Q62348 Translin {Mus musculus}; contains Pfam profile
           PF01997: Translin family
          Length = 238

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 514 QFILLTLDFFTSVIFMANVSPRFFIN 437
           +F L T D+ T + FM+N  PR+ +N
Sbjct: 137 EFGLETEDYLTGICFMSNDLPRYVVN 162


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,544,688
Number of Sequences: 28952
Number of extensions: 359802
Number of successful extensions: 942
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)