Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021192
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 37 0.012
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 36 0.027
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 32 0.44
AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical ... 29 2.3
Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical pr... 28 7.1
AC024791-24|AAF60656.1| 627|Caenorhabditis elegans Hypothetical... 28 7.1
AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical ... 27 9.4
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 27 9.4
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 56.0 bits (129), Expect = 2e-08
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Frame = -3
Query: 572 TKTVIHGSSL----LRRRKSVRQSLDNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVE 405
TK++ HG + L K+ + + L+ KL ++ +L++ + +FLSNRSFR R+
Sbjct: 5 TKSIDHGEQIDIIYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIG 64
Query: 404 GTRSSPRPLTAGVPQGXXXXXXXXXXXVNDIPRSPPTHLAL--FADDTTVY 258
T SS + T GVPQG VNDI P +A FADDT +Y
Sbjct: 65 QTLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLY 115
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -3
Query: 500 LIFKLFNMGVPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXX 324
L+ KL + G+ DFLS+R+F +V + P+++GVP+G
Sbjct: 12 LLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGSVSGPFLFLIF 71
Query: 323 VNDIPRSPPTHL--ALFADDTTVY 258
+N + S P + + FADD VY
Sbjct: 72 INSLLLSVPPSISCSAFADDLKVY 95
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1
Query: 313 ISLTNKLNRRGERTEPCGTPAVRGRGEER 399
ISLTN GERT+PCGTP G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 31.9 bits (69), Expect = 0.44
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = -3
Query: 476 GVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXVNDIPRSPP 297
G+ + L + ++L R R + S L GVPQG + D+P
Sbjct: 497 GIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQD 556
Query: 296 THLALFADDTTV 261
T L +ADD ++
Sbjct: 557 TMLISYADDMSI 568
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 652 QFGFRTNHSCVQQVHRFTEHILVGLNRPKPLYTGAL-FFDVAKAFDKVWT 506
Q GF+ HS V + T I+ GLN P + D+ AFDKV T
Sbjct: 436 QHGFKPEHSTTTAVIQVTNDIIGGLNMKNPPERAIMACLDLRAAFDKVPT 485
>AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical
protein B0546.2 protein.
Length = 436
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 460 SCSSYGTSCRTALFDIESREPAPPHDLSQLESRKALSSHPSYLAYSSTIFP 308
SCSS +S +A I S+E PP L + S++ S + SS + P
Sbjct: 37 SCSSSASSSSSAAKRIRSQEDGPPSKRWVLSASSTSSTNKSPIPSSSPVLP 87
>Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical
protein F28B1.3 protein.
Length = 802
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 479 MGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLT 375
+ +PD ++I R+ R V GT+SSP PLT
Sbjct: 405 LDLPDHYLMIFREEAHPIFMRRFVNGTQSSPIPLT 439
>AC024791-24|AAF60656.1| 627|Caenorhabditis elegans Hypothetical
protein Y47G6A.4 protein.
Length = 627
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 238 PNREEASERSPSPRTVVPKMAHRHQPSEKYCGAISEGKLHTDF-LPD*EEESHTP 77
PN ++ S P+PR + P+ A R PS+ A SE K + F D E+ TP
Sbjct: 540 PNVQQESVVVPAPRRLSPQRAPR--PSQNSPNAYSERKSFSAFPSEDPSEDYETP 592
>AF099918-2|AAN63400.1| 219|Caenorhabditis elegans Hypothetical
protein H05C05.1b protein.
Length = 219
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -1
Query: 463 VSCSSYGTSCRTALFDIESREPAPPHDLSQLESRKALSSHPSYLAYSS 320
+S +S T I+ P PPH S SR PS Y+S
Sbjct: 1 MSTASDSAETTTTTSSIDHLPPHPPHPTSHHNSRGGRGGRPSMKPYTS 48
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -1
Query: 463 VSCSSYGTSCRTALFDIESREPAPPHDLSQLESRKALSSHPSYLAYSS 320
+S +S T I+ P PPH S SR PS Y+S
Sbjct: 505 MSTASDSAETTTTTSSIDHLPPHPPHPTSHHNSRGGRGGRPSMKPYTS 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,289,415
Number of Sequences: 27780
Number of extensions: 351248
Number of successful extensions: 913
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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