Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021189
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 56 3e-08
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 52 5e-07
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 51 9e-07
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 49 4e-06
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 48 9e-06
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 46 3e-05
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 45 5e-05
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10) 44 8e-05
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 44 1e-04
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 43 2e-04
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 42 4e-04
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 42 6e-04
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 42 6e-04
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 39 0.004
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 36 0.022
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22) 36 0.022
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 35 0.067
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 35 0.067
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 35 0.067
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2) 32 0.47
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 32 0.47
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 32 0.47
SB_1747| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 31 0.82
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 31 1.1
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 1.6
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 29 2.5
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 3.3
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 29 3.3
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_12902| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 28 5.8
SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32) 28 7.6
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 28 7.6
SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05) 28 7.6
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 28 7.6
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = +2
Query: 254 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSVSWIKRLD 418
WNA E+G S + ++LW+PD+ L N A ++A Y +A+ VS+ G W+
Sbjct: 126 WNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLNMWLAPTI 185
Query: 419 ISTPISMQLDNWPNDMQTCTFKFGS 493
++T + + +P D Q+CT KFGS
Sbjct: 186 LTTSCKINVKYFPFDQQSCTLKFGS 210
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Frame = +2
Query: 251 EWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIK 409
+WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W+
Sbjct: 94 KWNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLA 153
Query: 410 RLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSTK 514
I + + + +P D+Q+C FGS H+ K
Sbjct: 154 PAIIKSECKIDVRFFPFDVQSCELTFGSWTHDGLK 188
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/29 (31%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +2
Query: 251 EWNAGEW-GCSTWLVSSERLWRPDVVLLN 334
+WN ++ G + +++ +++W+PDV+L N
Sbjct: 512 QWNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 50.8 bits (116), Expect = 9e-07
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Frame = +2
Query: 254 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------SNNGSVSWIKR 412
WN ++G + V +W+PD++L N A+T +L ++ S++GS +W+
Sbjct: 37 WNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVILSSDGSAAWLSP 96
Query: 413 LDISTPISMQLDNWPNDMQTCTFKFGSRMHNSTK 514
I T + + +P D+Q C KFGS H+ K
Sbjct: 97 AIIKTECKVDVRLFPFDVQYCDLKFGSWTHDGLK 130
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 254 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG--DYALRARVSNNGSVSWIKRLDIS 424
WN E+G + S+ +W PD+ +LN+A + +R +++ G V W+ L +
Sbjct: 54 WNETEYGGIKQMTLRSKLIWTPDISVLNSANKDMDLREKNIRLFINSAGEVLWMNPLILH 113
Query: 425 TPISMQLDNWPNDMQTCTFKFGS 493
T M + ++P D Q C +FGS
Sbjct: 114 TSCGMDIAHFPFDNQACELRFGS 136
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +2
Query: 254 WNAGEWG-CSTWLVSSERLWRPDVVLLNAA-ATTAGD---YALRARVSNNGSVSWIKRLD 418
WN ++G + V +W PD+VL N + ++G+ + + + ++G+V W+ +
Sbjct: 226 WNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSDSSGEMYKFTTKVNIHSDGTVQWLSPIQ 285
Query: 419 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSTKWIS*LTKEYTVC 550
+ + + + N+P D Q C +FGS ++ + S +T C
Sbjct: 286 VKSECKIDITNFPLDEQFCKLEFGSWAYDGFESASCPAWSHTEC 329
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +2
Query: 299 ERLWRPDVVLLNAAATT---AGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPN 460
+ +W PD+ LLN T AG ++ V N G W + + SM L WP
Sbjct: 149 KEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVENTGKCVWSGPVTFTFTCSMALSRWPF 208
Query: 461 DMQTCTFKFGSRMHNS 508
D QTC KFGS + S
Sbjct: 209 DQQTCAMKFGSLSYGS 224
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = +2
Query: 254 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSVSWIKRLD 418
WN +G + VS ++W PD+VL N A A+T G ++ R VS++G W+ +
Sbjct: 47 WNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKNMWLAPVI 106
Query: 419 ISTPISMQLDNWPNDMQTCTFKFGS 493
S+ ++++ +P D Q C+ KFGS
Sbjct: 107 FSSSCTIKIKYFPFDDQYCSLKFGS 131
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +2
Query: 236 DRQTTEWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YALRARVSNNGSVS 400
D + W+ + G T + ++ +W PD+VL ++A + Y +S +GS +
Sbjct: 50 DNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKTHVIISKDGSSA 109
Query: 401 WIKRLDISTPISMQLDNWPNDMQTCTFKFGS 493
W + + + +P D QTC KFGS
Sbjct: 110 WFSPASFRSTCKIDVTYFPFDEQTCYMKFGS 140
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = +2
Query: 251 EWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR----ARVSNNGSVSWIKR 412
+W+ ++G +V ER +W PDVVLLN A ++ + V +NG V W+
Sbjct: 49 QWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNEGNPVLVESNGVVRWLAP 108
Query: 413 LDISTPISMQLDNWPNDMQTCTFKFGS 493
+ + + M + ++P D Q C KF S
Sbjct: 109 VVLKSRCKMDVRSYPFDEQYCGLKFAS 135
>SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)
Length = 384
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +2
Query: 242 QTTEWNAGEWGCSTWLVSSER-LWRPDVVLL-NAAATTAG--DYA-LRARVSNNGSVSWI 406
Q T W+ E+G +V R +W+PD++L N G D+ R R++++G W
Sbjct: 5 QLTTWDPEEYGGVKEVVLQARDVWQPDIILYQNIIQDFDGRLDHTNTRVRITSSGMTYWS 64
Query: 407 KRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSTK 514
+ T ++ + ++P D Q C FGS H+ +
Sbjct: 65 MPFVVVTLCTINVSDFPFDTQQCKLTFGSWQHDGNE 100
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +2
Query: 254 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSNNGSVSWIKRLD 418
WN E+G + + LW+PD+ L N A + + + + +V+ +G+ +W+
Sbjct: 55 WNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNYSGTNTWLAPKI 114
Query: 419 ISTPISMQLDNWPNDMQTCTFKFGS 493
+T + + +P D Q C KFGS
Sbjct: 115 FTTSCKINVKYFPFDQQECRLKFGS 139
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +2
Query: 254 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT-AGD---YALRARVSNNGSVSWIKRLD 418
WN ++G + ++ ++W PD++L N A T AG Y S++G+ W
Sbjct: 136 WNTSKYGGIESVNLNPAKVWIPDIILYNNADETYAGGLEKYKTSVIASSDGTQEWNSPAS 195
Query: 419 ISTPISMQLDNWPNDMQTCTFKFGS 493
++ ++ + +P D Q C+ KFGS
Sbjct: 196 FTSTCNINVRYFPFDSQNCSLKFGS 220
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +2
Query: 254 WNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSNNGSVSWIKRLD 418
W+ +G T + V+ +W+PD+VL + T Y RA + +NG W +
Sbjct: 75 WDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMHNGYTEWFAPTE 134
Query: 419 ISTPISMQLDNWPNDMQTCTFKFGS 493
I + ++ + +P D Q C KFGS
Sbjct: 135 IHSICAIDITYFPFDEQFCKMKFGS 159
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Frame = +2
Query: 251 EWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NNGSVSWIKRL 415
+W+ + G T + V LW+PD+VL N Y +V + G + W
Sbjct: 97 KWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYSTGDIEWYSPN 156
Query: 416 DISTPISMQLDNWPNDMQTCTFKFGSRMHNSTK 514
+ T + + +P D QTC FGS +N K
Sbjct: 157 ILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLK 189
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +2
Query: 251 EWNAGEWGCSTWLVSSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGSVSWIKR 412
+W+ ++ S + +W PDV L+N AG L V +G V WI +
Sbjct: 410 QWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGKVDWIAQ 469
Query: 413 LDISTPISMQLDNWPNDMQTCTFKFGS 493
++ ++++ WP D Q CT F S
Sbjct: 470 ASFTSTCNLRVRFWPMDDQFCTLTFSS 496
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +2
Query: 299 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 478
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
Query: 479 FKFGS 493
F S
Sbjct: 86 ISFES 90
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Frame = +2
Query: 254 WNAGEWG-CSTWLVSSERLWRPDVVLLNAA--ATTAGD----------YALRARVSNNGS 394
WNA E+G S VS +R W PD++L N+ +A + Y + + +NG
Sbjct: 32 WNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGGGTEKYKTQIEIRSNGY 91
Query: 395 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 493
SW+ + + +P D Q CT +FGS
Sbjct: 92 NSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFGS 124
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = +2
Query: 254 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD---YALRARVSNNGSVSWIKRLD 418
W+ +G T + V R+WRPD++L N A T G + + ++ +GS W+ +
Sbjct: 86 WDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKFDGSSLWLAPII 145
Query: 419 ISTPISMQLDNWPNDMQTCTFKFGS 493
+ + +P D Q+C KFGS
Sbjct: 146 FKSTCKFDVAYFPFDEQSCILKFGS 170
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +2
Query: 251 EWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYALRARVSNNGSVSWIKRL 415
+WN ++G T + + + +W P V++ N A + R V ++G+V W+
Sbjct: 557 QWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRSDGTVLWMVPT 616
Query: 416 DISTPISMQLDNWPNDMQTCTFKFGSRMHNSTK 514
I + + + +P D Q C FGS ++ +K
Sbjct: 617 VIKSSCVIDVKYFPFDQQLCKIIFGSWHYDVSK 649
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +2
Query: 302 RLWRPDVVLLNA--AATTAGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQ 469
++WRPD NA ++ TA D + + ++ NG V + + I+ M+L ++P D Q
Sbjct: 34 KMWRPDPFCYNARESSLTASDDDINSMMTIHPNGDVVYSRMTIITAECEMKLHDFPMDEQ 93
Query: 470 TCTFKFGSRMHNSTK 514
C K GS + STK
Sbjct: 94 QCHLKLGSYSY-STK 107
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +2
Query: 293 SSERLWRPDVVLLNAAATT---AGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNW 454
S + +W PDV L+N A + AG + V G V W+ ++ +++ W
Sbjct: 23 SPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGGKVEWVAPASFTSDCKLRVRYW 82
Query: 455 PNDMQTCTFKFGS 493
P D Q CT F S
Sbjct: 83 PIDDQFCTLTFSS 95
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 299 ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPND 463
+++W+PD L N AG D +L RV NG+V++ R+ + M+ N+P D
Sbjct: 135 DKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKMEFRNFPMD 194
Query: 464 MQTCTFKFGS 493
Q+C S
Sbjct: 195 RQSCPVTISS 204
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 36.3 bits (80), Expect = 0.022
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Frame = +2
Query: 254 WNAGEWG-CSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 427
WNA E+G +T V +RLW PD+VL NA A + + + SW+ D S
Sbjct: 86 WNASEFGGVNTLHVEPDRLWVPDIVLYNNACAMDIRYFPFDEQSCDLQFASWM--YDTS- 142
Query: 428 PISMQLD-NWPNDMQTCTFKFGS--RMHNSTKWIS*LTKEYTVC 550
+ M++D N M T T K ++ K ++ LT +YT C
Sbjct: 143 KLEMKIDANETKVMDTFTNKEWEIPKLTIKKKRVNMLTIKYTCC 186
>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
Length = 636
Score = 36.3 bits (80), Expect = 0.022
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Frame = +2
Query: 260 AGEWGCSTWLVSS--ERLWRPDVVLLNAAATTA----GDYALRARVSNNGSVSWIKRLDI 421
AG+ S L S W+PD NA + D R + +G + + + + I
Sbjct: 279 AGKLNLSITLTGSAASNAWKPDPYCYNARQSNMMLEDKDVNSRLSIDPDGKIFYSRGVSI 338
Query: 422 STPISMQLDNWPNDMQTCTFKFGSRMHNST 511
M L ++P D Q C KFGS T
Sbjct: 339 VASCEMDLHDFPLDTQNCYLKFGSYAFTDT 368
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 34.7 bits (76), Expect = 0.067
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 377 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 493
V+N G V W + S+++ WP D+Q C+ FGS
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 59
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 34.7 bits (76), Expect = 0.067
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 359 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 493
+ + +VS+ G W+ ++T + + +P D Q+CT KFGS
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGS 57
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 34.7 bits (76), Expect = 0.067
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 377 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 493
V+N G V W + S+++ WP D+Q C+ FGS
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 140
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 305 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 472
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76
Query: 473 CTFKFGS 493
C FGS
Sbjct: 77 CNLVFGS 83
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 332 NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHN 505
N A T + + ++ N+G W I + ++ + +P D Q C KFGS +N
Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGSWTYN 62
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 305 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 472
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203
Query: 473 CTFKFGS 493
C FGS
Sbjct: 204 CNLVFGS 210
>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
Length = 75
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 377 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSTK 514
+ + G + W + T + + +P D QTC FGS +N K
Sbjct: 19 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLK 64
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 368 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 493
+A V +NG W +I + + + +P D Q C KFGS
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGS 62
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 374 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSTKWI 520
R+ NG++ + RL +++ M L N+P D Q C K M +KW+
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK----MEAFSKWL 108
>SB_1747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -1
Query: 404 SRRRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPIPLRSTQSFV 240
S RR+ G G+ ++ + L+ RQ +++ P TP +P+ STQ+ V
Sbjct: 66 SDRRTEILFPGEGQSLDKKTSEGSLSAIRQVTSTAPGTPQALNGTVPVTSTQAVV 120
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 383 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNST 511
+NG+ W + + +++ +P D QTC KFGS H+ T
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGSFSHDIT 249
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = +2
Query: 299 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 469
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 470 TCTFKFGSRMHNST 511
C S + +T
Sbjct: 92 VCEMMLESYGYQAT 105
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 25.8 bits (54), Expect(2) = 1.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 452 WPNDMQTCTFKFGSRMHNSTK 514
+P D Q C KFGS H+S++
Sbjct: 1509 FPFDEQKCLLKFGSWTHDSSR 1529
Score = 22.6 bits (46), Expect(2) = 1.6
Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 254 WNAGEWGCSTWL-VSSERLWRPDVVLLN 334
W+ ++G + V+ E +W PD+V+ N
Sbjct: 1479 WDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +2
Query: 254 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDI 421
WN ++G +++ S +LW PD+ L N A + V+++GS+ W
Sbjct: 287 WNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSDGSIGWYYPTIF 346
Query: 422 STPISMQLDNWPNDMQ 469
+ ++ + +P D Q
Sbjct: 347 KSSCTIDVTYFPFDDQ 362
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 391
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 305 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 475
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 191 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 87
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_12902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1585
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 539 YTVCSSQERG--M*RICPVRCRARTVAKWKLAWQCSRC 646
+ + S Q RG + + VRC V K L+W+C RC
Sbjct: 1379 HELISIQSRGSFLQTVARVRCTVTAVQKVALSWRCLRC 1416
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 191 VRVHRADTGRSSNELDRQTTEWNAGEW--GCSTWLVSSERLWRP 316
++V+ GR ++++++ +W+A W GC W V + L RP
Sbjct: 46 LQVYDPPEGRKYSKMNKKLQKWSADVWGLGCLIWEVFNGTLPRP 89
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 546 TVYSFVNHEIHFVLLCILEPNLNVQVCMSLGQLSNCIEIG 427
++Y+ V H +H VL L L VC L + +C +G
Sbjct: 118 SLYTLVRHRVHTVLTQNLSIELGAAVCRLLIEYPHCWPVG 157
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +2
Query: 305 LWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 478
+W PD NA + + NG + + R + M L N+P D+Q C+
Sbjct: 151 IWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQMDLFNFPLDVQRCS 208
>SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32)
Length = 363
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 377 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 493
+ ++G+ SW +I + + + +P D Q+C FGS
Sbjct: 10 IDSDGTNSWYAPTEIKSICQIDITYFPFDAQSCPIIFGS 48
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 254 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA 340
WN + G ++ + RLW PD+ L N A
Sbjct: 76 WNVSAYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1453
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 227 NELDRQTTEWNAGEWGCSTWLVSSERLWRP 316
N D + AGE S WL E LWRP
Sbjct: 976 NPADEASRGLKAGELQDSRWLTGPEFLWRP 1005
>SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05)
Length = 109
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +2
Query: 383 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNS 508
N G++ W + + + + +P D Q C+ FGS + S
Sbjct: 12 NTGAIEWYAPTLVKSICKIDITYFPFDKQNCSLVFGSWTYTS 53
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 254 WNAGEWGCSTWL-VSSERLWRPDVVLLN 334
WNA E+G L +S +W PD+VL N
Sbjct: 95 WNASEYGGIDKLNISPTLMWLPDIVLHN 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,068,480
Number of Sequences: 59808
Number of extensions: 519902
Number of successful extensions: 1556
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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