Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021188
         (677 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P53164 Cluster: NADH pyrophosphatase; n=3; Saccharomyce...    37   0.52 
UniRef50_UPI0000D57924 Cluster: PREDICTED: similar to CG31794-PC...    33   6.4  
UniRef50_Q4N8S6 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_Q80Z21 Cluster: Secreted gel-forming mucin; n=9; Tetrap...    33   8.4  

>UniRef50_P53164 Cluster: NADH pyrophosphatase; n=3; Saccharomyces
           cerevisiae|Rep: NADH pyrophosphatase - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 384

 Score = 36.7 bits (81), Expect = 0.52
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = -3

Query: 165 NVYSTFR*YLDTLEISHKFSKNTSKPFFELKISIRIECYSKNRKLNWNVRDS 10
           ++YS  + YLD L   +KF      P F ++   +++C ++NR +  NVRD+
Sbjct: 161 SLYSQGKMYLDWLA-KYKFCPGCGSPLFPVEAGTKLQCSNENRNVYCNVRDA 211


>UniRef50_UPI0000D57924 Cluster: PREDICTED: similar to CG31794-PC,
           isoform C; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG31794-PC, isoform C - Tribolium castaneum
          Length = 504

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 577 QSNYSAHTPGYNVGQSPGYG-RTGGRGNLSELDT 675
           Q    A TPGY  G  PG G +     NLSELDT
Sbjct: 60  QPTSGARTPGYGYGSGPGAGEKRTFNNNLSELDT 93



 Score = 32.7 bits (71), Expect = 8.4
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = +2

Query: 257 LDALLADLQNSINPGG 304
           LDALLADLQN+++PGG
Sbjct: 4   LDALLADLQNTVSPGG 19


>UniRef50_Q4N8S6 Cluster: Putative uncharacterized protein; n=1;
           Theileria parva|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 509

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
 Frame = -1

Query: 266 KHLNFHGLVNLGVFGFSVRARFNYFSIH---VIVDKI---MCI---RHFDNILTLSRYHT 114
           K   F+ ++N+ ++ + V   FNY+ I    ++  K+   +C    RH +N + L  Y  
Sbjct: 289 KTQQFNEVINIVIYCYLVEKEFNYYYIKLLLILTSKLNLNVCKKYKRHINNNIVL--YFK 346

Query: 113 NFQKTPQNRFLNLKFRFESNVIRKTENL 30
           NF+   QN+F  L   F   ++ K   L
Sbjct: 347 NFESLTQNQFSLLSKLFYHMILNKISGL 374


>UniRef50_Q80Z21 Cluster: Secreted gel-forming mucin; n=9;
            Tetrapoda|Rep: Secreted gel-forming mucin - Mus musculus
            (Mouse)
          Length = 1726

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +1

Query: 520  NTSSFHSEKMTPHKYTSTVQSNYSAHTPGYNVGQS 624
            NT+S      T H Y+STV S  S HTPG +   S
Sbjct: 1506 NTTSSVPVTSTEHPYSSTVTSGSSTHTPGLSPSSS 1540


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,009,001
Number of Sequences: 1657284
Number of extensions: 12116471
Number of successful extensions: 38334
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38305
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)