Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021188
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.0  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   3.0  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.0  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 108 KICVISRECQDIIEMSNTHY 167
           K CV+++  + + +++N HY
Sbjct: 194 KFCVVNQYIKQVCKLNNGHY 213


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 108 KICVISRECQDIIEMSNTHY 167
           K CV+++  + + +++N HY
Sbjct: 19  KFCVVNQYIKQVCKLNNGHY 38


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 248 GLVNLGVFGFSVRARFNYFSIHV 180
           G++   +FG S ++R NYF  H+
Sbjct: 44  GVLYTLLFGRSRKSRMNYFITHL 66


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 437 GNSGCLTS*DGPVKCPCLEETQFCPGSWC 351
           GN+ C T     V CP   + +  PG  C
Sbjct: 701 GNNKCFTMECPQVTCPDNMKLEKVPGECC 729


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,596
Number of Sequences: 336
Number of extensions: 3111
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)