Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021187
(695 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 32 0.50
03_04_0044 + 16754638-16754676,16755472-16755598,16756325-167564... 31 0.66
10_06_0151 + 11276554-11276916,11277020-11277403 31 0.87
12_02_1026 - 25478462-25479232,25479249-25479821 30 1.5
08_01_0585 + 5187545-5187961 30 2.0
03_04_0206 - 18493178-18495310 30 2.0
02_01_0302 - 2021221-2023305 30 2.0
09_04_0229 - 15867333-15868033,15868097-15869249 29 2.7
06_03_0797 - 24697241-24698278 29 2.7
05_03_0084 + 8266564-8266699,8267497-8267685,8267772-8267911,826... 29 2.7
10_07_0104 - 12907816-12908301 29 3.5
08_01_0627 + 5451140-5451839,5452635-5452662,5452730-5452786,545... 29 4.7
07_03_1435 - 26532302-26533159,26533559-26534902,26535180-26535188 29 4.7
04_03_0777 - 19492053-19492091,19492356-19492934 29 4.7
03_06_0544 + 34639419-34639455,34639763-34640096,34640186-34640480 29 4.7
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 29 4.7
02_03_0181 + 16100495-16101025,16101335-16101358 29 4.7
11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993 28 6.2
09_02_0039 + 3293904-3294584 28 6.2
05_06_0088 - 25453249-25453282,25453369-25453461,25454111-254541... 28 6.2
04_04_0666 + 27086568-27086975,27087073-27087477,27088542-270886... 28 6.2
04_03_0249 + 13462985-13463170,13463190-13463297 28 6.2
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 28 8.1
07_03_1153 + 24398122-24398747,24399326-24399542,24399741-244002... 28 8.1
05_03_0198 + 9612767-9613243 28 8.1
05_03_0040 - 7646525-7647775 28 8.1
04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141 28 8.1
04_04_1405 - 33305948-33309676,33309749-33310468,33310533-333114... 28 8.1
03_03_0262 + 15968884-15969687 28 8.1
01_01_0854 + 6662533-6662652,6662727-6662996,6663118-6663171,666... 28 8.1
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 28 8.1
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 31.9 bits (69), Expect = 0.50
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 22 GLTPTPSDTERNPQL-SSVSYPQGHSTASSHRRSPTEQTGTISAT 153
G TPTPSDT +P SS + P G ST + P +GT T
Sbjct: 278 GYTPTPSDTPPSPSSGSSRTTPGGCSTPTPCGTPPAPSSGTSPTT 322
>03_04_0044 +
16754638-16754676,16755472-16755598,16756325-16756451,
16756866-16757431,16757896-16758211,16758373-16758613,
16758734-16758823,16759343-16759780,16759877-16760185,
16760392-16760406
Length = 755
Score = 31.5 bits (68), Expect = 0.66
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 6/117 (5%)
Frame = +2
Query: 353 GATTAPIYGVPTRSCAKLWTR-RLSMKRA*NLSNGASSHRARLSWAAPGREWCGGKGRAL 529
G+ +A +G R + R R S A N S SS + S A G + R+
Sbjct: 190 GSKSAGTFGAIKREVGVVGARQRPSDNTATNTSTSNSSVKVPTSTATKENASNGQQSRSS 249
Query: 530 GHGTAEAPDARNISYSA---SRGRVHSEQ--PTSHPRIGERRRSRPSDTEPLPAREA 685
G + + + + S+ S + HS+ P HP++ + +P P PA A
Sbjct: 250 GVSSKNSRPSSSTHLSSRPSSSSQYHSKPNTPVGHPKVNPQLEWKPKSVSPSPANHA 306
>10_06_0151 + 11276554-11276916,11277020-11277403
Length = 248
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 479 SWAAPGREWCGGKGRALGHGTAEAPDARNISYSA 580
+W + E GG GR+ G GTA D+R +S+ A
Sbjct: 11 TWTSVPGEGGGGGGRSNGGGTAAESDSRELSFDA 44
>12_02_1026 - 25478462-25479232,25479249-25479821
Length = 447
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 169 PRLLRALSSDHRQKHPEALRGHLHMSHYAAVHLEPAASLSTDSAVMALRRMIARRGAP 342
PR+LR +++ R +HP LR H ++ A ++L L+T +++ + RR P
Sbjct: 67 PRVLREVAAMRRLRHPHVLRLHEVLATRARIYL--VMELATGGDLLSRLAALPRRRLP 122
>08_01_0585 + 5187545-5187961
Length = 138
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 521 RALGHGTAEAPDARNISYSASRGRVHSEQPTSHPRIGERRRSRPSDTE 664
R+ T E P +R + S R+ +++ H I ERRR RP+ E
Sbjct: 57 RSTSFTTVEDPSSRRPDPTLSSRRLAAKRRRPHAAIEERRRPRPAAAE 104
>03_04_0206 - 18493178-18495310
Length = 710
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = +3
Query: 471 RAFHGRR---LGENGAAVKAALSATEQPRRPTPEIFHTLLAEAEFTVNSRPLTHVSVSAD 641
R HGRR +G NG L + P P LL E E ++R V+AD
Sbjct: 179 RISHGRRYGLVGPNGMGKSTLLKLLSWRQVPVPRSIDVLLVEQEIIGDNRSALEAVVAAD 238
Query: 642 D 644
+
Sbjct: 239 E 239
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +3
Query: 213 PRSTTWPSSHVSLRCGTFRTGSEPQHGLSSDGTPAHDRAPGSS 341
P S T PSSH + T S P TP+H PGS+
Sbjct: 448 PSSATTPSSHSPPGGSSSTTPSYPSPNGGKPSTPSHPSPPGST 490
>09_04_0229 - 15867333-15868033,15868097-15869249
Length = 617
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = -1
Query: 428 SCSVALSKAWRSSLSAPRKLVPLSLHISVGAPRRAIMRRSAITAESVLRLAAGSKC 261
SC+ ++ KA +S+S+P+ ++ ++ + GA +A R I + AA + C
Sbjct: 109 SCATSIGKAANASVSSPKDIIRTAVDVIGGAVDQAFDRADLIMSNDPRVKAAVADC 164
>06_03_0797 - 24697241-24698278
Length = 345
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 67 SSVSYPQGHSTASSHRRSPTEQTGTISATIYIRGPRLLRALSSDHRQKHPEALRGHLHMS 246
S+++YP G + ++ TG +IRGP++ ++ +P+ +R
Sbjct: 216 SNITYPNGVAISADRTHLIVALTGPCKLRYWIRGPKVGKSEPFVDLPGYPDNVRPDEKGG 275
Query: 247 HYAAVHLEP-AASLSTDSAVMALR 315
++ A+H E D+ ++A+R
Sbjct: 276 YWVALHREKYELPFGPDNHLVAMR 299
>05_03_0084 +
8266564-8266699,8267497-8267685,8267772-8267911,
8268130-8268225,8268327-8268388,8268559-8268634,
8268709-8268785,8268866-8268899,8268983-8269132,
8269222-8269356,8269450-8269533
Length = 392
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 297 SSDGTPAHDRAPGSSDGDMERQRHQFTG 380
SSDG HD +PG SD M ++ TG
Sbjct: 42 SSDGVGHHDCSPGLSDNSMSKEDAMSTG 69
>10_07_0104 - 12907816-12908301
Length = 161
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/28 (57%), Positives = 16/28 (57%), Gaps = 8/28 (28%)
Frame = -1
Query: 236 RWPRSASGCFC--------RWSLDRARS 177
RW RSASGC C RWS RARS
Sbjct: 123 RWRRSASGCRCPAARRWSGRWSAARARS 150
>08_01_0627 +
5451140-5451839,5452635-5452662,5452730-5452786,
5453205-5453874
Length = 484
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 31 PTPSDTERNPQLSSVSYPQGHSTASSHRR 117
P P + + PQL++ S+P TAS RR
Sbjct: 25 PNPPEPQPQPQLATPSFPTTTDTASRRRR 53
>07_03_1435 - 26532302-26533159,26533559-26534902,26535180-26535188
Length = 736
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 259 VHLEPAASLSTDSAVMALRRMIARRGAPTEIWSDNGTNLRGAD 387
+ +P +++ D A ++ R G P I +DNGT G +
Sbjct: 485 IEAKPVITITADKARDFFINIVHRFGVPNRIITDNGTQFTGGE 527
>04_03_0777 - 19492053-19492091,19492356-19492934
Length = 205
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 38 PVTRSVIHNCLPCRIRKDTPPRPATGDHPPSRLAQ 142
P+ ++N LP R R+ PP+P PP A+
Sbjct: 122 PLAEVDLNNILPSRTRRRAPPQPGAYLVPPEEAAE 156
>03_06_0544 + 34639419-34639455,34639763-34640096,34640186-34640480
Length = 221
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +3
Query: 270 TGSEPQHGLSSDGTPAHDRAPGSSDGDMERQRHQFTGCRQGAAPSFGQ 413
T +P+ GL G P R P +DG + R GCR G + Q
Sbjct: 142 TAEDPEVGLG--GGPRRQRTPMQADGSVVRWSGLGGGCRSGRSDEVPQ 187
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 423 LSRLVQSLAQLLVGTP*IGAVVAPYLRRSSPARDHAP 313
L RL + Q P +G+ V P++RRS R H P
Sbjct: 46 LKRLNIRVEQAADAAPTVGSAVGPHIRRSLGRRTHRP 82
>02_03_0181 + 16100495-16101025,16101335-16101358
Length = 184
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 211 ASAGGHLIGPEVIEAHVCKWSPILCQSARW 122
A+A G + P + AH+ WSP L + RW
Sbjct: 3 AAAQGEVKTPALCSAHMMSWSPSLEGAPRW 32
>11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993
Length = 1125
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 274 AASLSTDSAVMALRRMIARRGAPTEIWS 357
+ASLS S MA+RR+ +RG P + +S
Sbjct: 620 SASLSYSSPTMAIRRLCLQRGYPMKCFS 647
>09_02_0039 + 3293904-3294584
Length = 226
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +3
Query: 252 RCGTFRTGSEPQHGLSSDGTPAHDRAPGSSDGDMERQRHQFTGCRQGAAPSFGQGD 419
R T +E + DG A A DGD+ + R G A G GD
Sbjct: 29 RSATATAVAEAETAALGDGNSARGEAEAPKDGDVMAAAEEVEAARGGEAEVAGDGD 84
>05_06_0088 -
25453249-25453282,25453369-25453461,25454111-25454199,
25454603-25454665,25454935-25455024,25455204-25455264,
25455499-25455593,25455861-25455950,25456136-25456222,
25456992-25457303
Length = 337
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 326 AIMRRSAITAESVLRLAAGSKCTA 255
A++ RSA AE V+RL G C A
Sbjct: 17 AVLHRSAAAAEGVIRLPRGRACAA 40
>04_04_0666 +
27086568-27086975,27087073-27087477,27088542-27088635,
27088731-27088768,27088853-27088999,27089167-27089266,
27090001-27090953,27091512-27091569,27092904-27093022
Length = 773
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 398 AKLWTRRLSMKRA*NLSNGASSHRARLSWAAP 493
+ W R S R S G +++ RLSWAAP
Sbjct: 542 SSFWPRTRSKTRTERNSVGVTTNDTRLSWAAP 573
>04_03_0249 + 13462985-13463170,13463190-13463297
Length = 97
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +3
Query: 225 TWPSSHVSLRCGTFRTGS--EPQHGLSSD 305
TWP HV RCG R + + Q G +SD
Sbjct: 59 TWPQRHVRWRCGMVRVSAALDWQGGFNSD 87
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 271 PAASLSTDSAVMALRRMIARRGAPTEIWSDNGT 369
P + SA+ ++ + AR G P I +DNGT
Sbjct: 1655 PVVKIDKHSALKFIKGITARFGVPNRIITDNGT 1687
>07_03_1153 +
24398122-24398747,24399326-24399542,24399741-24400220,
24400801-24401007,24401112-24401249,24401317-24401538
Length = 629
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -3
Query: 588 PLLAEYEIFRASGASAVPWPRARPLPPHHS 499
PLL + E+ A+ A A P A PLPP S
Sbjct: 31 PLLQQPELSPAAAADAAPATDAAPLPPKPS 60
>05_03_0198 + 9612767-9613243
Length = 158
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 516 LPPHHSLPGAAHERRARW 463
LP H SLP +AH R A W
Sbjct: 126 LPTHLSLPTSAHHRSAAW 143
>05_03_0040 - 7646525-7647775
Length = 416
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +2
Query: 518 GRALGHGTAEAPDARNISYSASRGRVHSEQPTSHPRIGERRRSRPS-DTEPLPAREARRE 694
GR LGHG ++Y +P HP+ + +P + +P+P E + E
Sbjct: 32 GRGLGHGARFMSKQGRVTYEKLPEPEPKPKPKPHPKPTPKPEPKPEPEPKPVPEPEPKPE 91
>04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141
Length = 606
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 25 LTPTPSDTERNPQLSSVSYPQGHSTASSHRRSPTE 129
LTPT + RNP+L Y Q A +SP +
Sbjct: 425 LTPTSGEARRNPKLRIGLYSQHFCDALPEEKSPVQ 459
>04_04_1405 - 33305948-33309676,33309749-33310468,33310533-33311439,
33334405-33334484
Length = 1811
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 271 PAASLSTDSAVMALRRMIARRGAPTEIWSDNGT 369
P + SA+ ++ + AR G P I +DNGT
Sbjct: 1564 PVVKIDKHSALKFIKGITARFGVPNRIITDNGT 1596
>03_03_0262 + 15968884-15969687
Length = 267
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 446 SNGASSHRARLSWAAPGREWCGGKGRALGHGTAEAPDARNISYSASRG 589
S G RAR + PG CGG GR L A + ++ +A G
Sbjct: 36 SGGGGRGRARFVFGGPGDGGCGG-GRGLDEAAIAALPTKVVAAAAEGG 82
>01_01_0854 +
6662533-6662652,6662727-6662996,6663118-6663171,
6663723-6663784,6663940-6664008,6664082-6664133,
6664287-6664460
Length = 266
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -1
Query: 536 RGRERGLYRRTILSQAPPMKGAPG-GMKRHWISFKLASCSVALSKA 402
RG E+ + R + PP G G R W S +SC +AL+ A
Sbjct: 48 RGSEKLVVTRASDEEGPPEPAGQGRGGGRAWPSLDASSCGLALAAA 93
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +2
Query: 452 GASSHRARLSWAAPGREWCGGKGRALGHGTAEAPD-ARNISYSASRGRVHSEQPTSHPRI 628
G H AR A + C +GR+ + +R SYS SR R +S +
Sbjct: 115 GIDGHWARDCKAGDWKNRCYRRGRSYSRSPSPRRGRSRGRSYSRSRSRSYSRSQSPRRDS 174
Query: 629 GERRRSR-PSDT 661
RRSR P D+
Sbjct: 175 RNERRSRSPRDS 186
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,061,535
Number of Sequences: 37544
Number of extensions: 612218
Number of successful extensions: 2912
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2907
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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