Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021186
(756 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 110 4e-23
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 109 1e-22
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 108 2e-22
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 107 4e-22
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 106 5e-22
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 105 9e-22
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 105 9e-22
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 105 1e-21
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 104 3e-21
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 100 4e-20
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 100 4e-20
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 99 1e-19
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 98 2e-19
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 98 2e-19
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 97 4e-19
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 97 5e-19
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 96 7e-19
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 96 1e-18
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 89 1e-16
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 88 2e-16
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 87 4e-16
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 87 4e-16
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 86 1e-15
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 84 4e-15
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 82 1e-14
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 81 2e-14
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 79 2e-13
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 76 8e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 76 8e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 76 1e-12
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 75 3e-12
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 75 3e-12
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 75 3e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 74 3e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 71 2e-11
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 70 5e-11
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 69 9e-11
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 69 9e-11
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 69 2e-10
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 69 2e-10
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 68 2e-10
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 68 3e-10
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 68 3e-10
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 67 4e-10
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 67 5e-10
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 66 7e-10
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 66 7e-10
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 65 2e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 65 2e-09
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 65 2e-09
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 64 4e-09
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 64 4e-09
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 64 5e-09
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 64 5e-09
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 63 6e-09
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 63 6e-09
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 62 1e-08
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 62 2e-08
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 60 4e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 8e-08
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 60 8e-08
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 60 8e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 58 2e-07
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 58 2e-07
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 58 3e-07
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 57 4e-07
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 57 4e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 57 4e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 57 4e-07
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 57 4e-07
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 57 5e-07
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 57 5e-07
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 56 9e-07
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 55 2e-06
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 55 2e-06
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 55 2e-06
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 55 2e-06
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 55 2e-06
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 54 4e-06
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 54 5e-06
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 53 7e-06
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 53 9e-06
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 52 2e-05
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 52 2e-05
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 52 2e-05
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 51 4e-05
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 50 6e-05
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 49 1e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 48 3e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 45 0.002
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 44 0.003
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 43 0.007
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 41 0.038
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 40 0.050
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 36 0.82
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 34 3.3
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 3.3
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 34 3.3
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 33 7.6
UniRef50_Q8I425 Cluster: Putative uncharacterized protein PFE038... 33 7.6
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 110 bits (264), Expect = 4e-23
Identities = 52/70 (74%), Positives = 56/70 (80%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILY HLF FFGHPE
Sbjct: 186 LFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPE 245
Query: 686 VYILILPGFG 715
VYILILPGFG
Sbjct: 246 VYILILPGFG 255
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 423 ISS 431
+SS
Sbjct: 158 VSS 160
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 15 DIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVM 74
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N VP+++GAPD+AFPR+ F PP L
Sbjct: 75 PAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 109 bits (261), Expect = 1e-22
Identities = 54/83 (65%), Positives = 58/83 (69%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILY HLF FFGHPE
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPE 226
Query: 686 VYILILPGFGYNFSYYFTRKRKK 754
VYILILPGFG F KK
Sbjct: 227 VYILILPGFGIISHMIFNESGKK 249
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRM 81
Score = 57.2 bits (132), Expect = 4e-07
Identities = 30/63 (47%), Positives = 33/63 (52%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 423 ISS 431
SS
Sbjct: 139 ASS 141
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 108 bits (259), Expect = 2e-22
Identities = 50/70 (71%), Positives = 55/70 (78%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILY HLF FFGHPE
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPE 242
Query: 686 VYILILPGFG 715
VYILI+PGFG
Sbjct: 243 VYILIIPGFG 252
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/63 (55%), Positives = 37/63 (58%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 423 ISS 431
ISS
Sbjct: 155 ISS 157
Score = 59.7 bits (138), Expect = 8e-08
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 107 bits (256), Expect = 4e-22
Identities = 53/82 (64%), Positives = 58/82 (70%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILY HLF FFGHPE
Sbjct: 191 LFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPE 250
Query: 686 VYILILPGFGYNFSYYFTRKRK 751
VYILILPGFG T RK
Sbjct: 251 VYILILPGFGMISHIVSTFSRK 272
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/63 (50%), Positives = 37/63 (58%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 423 ISS 431
SS
Sbjct: 163 ASS 165
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 20 DIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVM 79
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVP+++G+PD+AFPR+ F PP L
Sbjct: 80 PVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 106 bits (255), Expect = 5e-22
Identities = 54/83 (65%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILY HLF FFGHPE
Sbjct: 183 LFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 686 VYILILPGFG---YNFSYYFTRK 745
VYILILPGFG + +YY +K
Sbjct: 243 VYILILPGFGIISHVVAYYAGKK 265
Score = 74.5 bits (175), Expect = 3e-12
Identities = 41/94 (43%), Positives = 47/94 (50%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 14 DIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPI 73
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPP 282
N LVPL++GAPD+AFPR+ F PP
Sbjct: 74 LIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 105 bits (253), Expect = 9e-22
Identities = 54/83 (65%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILY HLF FFGHPE
Sbjct: 184 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 243
Query: 686 VYILILPGFG---YNFSYYFTRK 745
VYILILPGFG + +YY +K
Sbjct: 244 VYILILPGFGMISHVVTYYAGKK 266
Score = 77.0 bits (181), Expect = 5e-13
Identities = 42/94 (44%), Positives = 48/94 (51%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 15 DIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPI 74
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPP 282
N LVPL++GAPD+AFPR+ F PP
Sbjct: 75 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPP 108
Score = 70.1 bits (164), Expect = 5e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 423 ISS 431
ISS
Sbjct: 156 ISS 158
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 105 bits (253), Expect = 9e-22
Identities = 54/83 (65%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILY HLF FFGHPE
Sbjct: 183 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 686 VYILILPGFG---YNFSYYFTRK 745
VYILILPGFG + +YY +K
Sbjct: 243 VYILILPGFGMISHIVTYYSGKK 265
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/96 (42%), Positives = 48/96 (50%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 14 DIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPI 73
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVPL++GAPD+AFPR+ F PP L
Sbjct: 74 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 66.1 bits (154), Expect = 9e-10
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 423 ISS 431
+SS
Sbjct: 155 VSS 157
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 105 bits (252), Expect = 1e-21
Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILY HLF FFGHPE
Sbjct: 183 LFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPE 242
Query: 686 VYILILPGFG---YNFSYYFTRK 745
VYILILPGFG + +YY +K
Sbjct: 243 VYILILPGFGMISHVVTYYAGKK 265
Score = 74.5 bits (175), Expect = 3e-12
Identities = 41/94 (43%), Positives = 47/94 (50%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 14 DIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPV 73
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPP 282
N LVPL++GAPD+AFPR+ F PP
Sbjct: 74 MIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 104 bits (249), Expect = 3e-21
Identities = 50/65 (76%), Positives = 52/65 (80%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILY HLF FFGHPE
Sbjct: 156 LFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPE 215
Query: 686 VYILI 700
VYILI
Sbjct: 216 VYILI 220
Score = 83.0 bits (196), Expect = 7e-15
Identities = 46/88 (52%), Positives = 48/88 (54%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLP 506
ISS SFDQ+P
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMP 155
Score = 75.8 bits (178), Expect = 1e-12
Identities = 39/70 (55%), Positives = 43/70 (61%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 259 *DFDSYPPPL 288
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 100 bits (239), Expect = 4e-20
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LY HLF FFGHPE
Sbjct: 187 LFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPE 246
Query: 686 VYILILPGFG 715
VYILILPGFG
Sbjct: 247 VYILILPGFG 256
Score = 56.0 bits (129), Expect = 9e-07
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +3
Query: 315 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Score = 40.7 bits (91), Expect = 0.038
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 79 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 100 bits (239), Expect = 4e-20
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILY HLF FFGHPE
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPE 243
Query: 686 VYILILPGFG 715
VYILI+PGFG
Sbjct: 244 VYILIIPGFG 253
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXX 177
DIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 14 DIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMP 73
Query: 178 XXXXXXXN*LVPLILGAPDIAFPRI 252
N L+PL LG PD+ FPR+
Sbjct: 74 ALIGGFGNFLLPLGLGGPDMGFPRL 98
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+ H+F FFGHPE
Sbjct: 289 LFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPE 348
Query: 686 VYILILPGFG 715
VYI+ILP FG
Sbjct: 349 VYIVILPAFG 358
Score = 46.4 bits (105), Expect = 8e-04
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 309 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASS 263
Score = 37.5 bits (83), Expect = 0.35
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 76 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 249
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 250 I 252
+
Sbjct: 203 L 203
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 98.3 bits (234), Expect = 2e-19
Identities = 49/82 (59%), Positives = 55/82 (67%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LY HLF FFGHPE
Sbjct: 226 LFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPE 285
Query: 686 VYILILPGFGYNFSYYFTRKRK 751
VYI+ILPGFG T RK
Sbjct: 286 VYIMILPGFGIISQIVSTFSRK 307
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +3
Query: 318 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Score = 36.3 bits (80), Expect = 0.82
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 118 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
++N ++TAH N VP+++GAPD+AFPR+
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRM 137
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 98.3 bits (234), Expect = 2e-19
Identities = 53/93 (56%), Positives = 60/93 (64%)
Frame = -2
Query: 287 KGGG*ESKSYIFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 108
K GG +FIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 107 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 9
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/63 (57%), Positives = 43/63 (68%)
Frame = -3
Query: 430 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLIFL 251
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 250 FVG 242
G
Sbjct: 138 IRG 140
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = -1
Query: 663 NKCGYKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHT 511
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T T
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQT 50
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 97.1 bits (231), Expect = 4e-19
Identities = 45/70 (64%), Positives = 52/70 (74%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY HLF FFGHPE
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPE 243
Query: 686 VYILILPGFG 715
VYILI+PGFG
Sbjct: 244 VYILIIPGFG 253
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/63 (55%), Positives = 38/63 (60%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 423 ISS 431
ISS
Sbjct: 156 ISS 158
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DI LY EL PGS L G+ Q++N +V HA
Sbjct: 13 DIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVM 72
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRI 252
N L+PL++GA D AFPRI
Sbjct: 73 PALIGGFGNYLLPLMIGATDTAFPRI 98
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 96.7 bits (230), Expect = 5e-19
Identities = 46/61 (75%), Positives = 49/61 (80%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILY HLF FFGHP+
Sbjct: 180 LFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPK 239
Query: 686 V 688
+
Sbjct: 240 L 240
Score = 83.0 bits (196), Expect = 7e-15
Identities = 47/96 (48%), Positives = 50/96 (52%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 11 DIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPI 70
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVPL+LGAPD+AFPR+ F PP L
Sbjct: 71 MIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
Score = 83.0 bits (196), Expect = 7e-15
Identities = 46/88 (52%), Positives = 48/88 (54%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 423 ISSXXXXXXXXXXXXXXXXXXXSFDQLP 506
ISS SFDQ+P
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMP 179
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 96.3 bits (229), Expect = 7e-19
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILY HLF FFGHPE
Sbjct: 210 LFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPE 269
Query: 686 VYILILPGFG 715
VYILI+PGFG
Sbjct: 270 VYILIIPGFG 279
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +3
Query: 309 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 144 IIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRL 124
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 95.9 bits (228), Expect = 1e-18
Identities = 45/70 (64%), Positives = 50/70 (71%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI Y H F FFGHPE
Sbjct: 184 LFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPE 243
Query: 686 VYILILPGFG 715
VYILI+PGFG
Sbjct: 244 VYILIIPGFG 253
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +3
Query: 309 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
+VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISS 158
Score = 41.9 bits (94), Expect = 0.016
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 79 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 89.0 bits (211), Expect = 1e-16
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = +2
Query: 575 ITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
IT++LTDRN NTSFF+ AGGGDPIL+ HLF FFGHPEVYILI+PGFG
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFG 278
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXX 177
DIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 42 DIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMP 101
Query: 178 XXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N L+PL++G PD+AFPR+ F PP L
Sbjct: 102 ALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 410
P NI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 411 HLAGISS 431
HL+G+SS
Sbjct: 184 HLSGVSS 190
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 88.2 bits (209), Expect = 2e-16
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = +2
Query: 566 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A IT+LL DRN T+FF+P+GGGDPIL+ HLF FFGHPEVY+LILPGFG
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFG 342
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +3
Query: 321 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 87.0 bits (206), Expect = 4e-16
Identities = 42/70 (60%), Positives = 49/70 (70%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY H+F FFGHPE
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPE 260
Query: 686 VYILILPGFG 715
VYILI+P FG
Sbjct: 261 VYILIVPVFG 270
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 423 ISS 431
+SS
Sbjct: 173 LSS 175
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 88 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 87.0 bits (206), Expect = 4e-16
Identities = 42/70 (60%), Positives = 49/70 (70%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY H+F FFGHPE
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPE 260
Query: 686 VYILILPGFG 715
VYILI+P FG
Sbjct: 261 VYILIVPVFG 270
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 423 ISS 431
+SS
Sbjct: 173 LSS 175
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 88 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 85.8 bits (203), Expect = 1e-15
Identities = 39/70 (55%), Positives = 48/70 (68%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+ H+F FFGHPE
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPE 245
Query: 686 VYILILPGFG 715
VYI++LP FG
Sbjct: 246 VYIILLPVFG 255
Score = 39.9 bits (89), Expect = 0.066
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 94 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDS 273
G L GD Q YN ++T+H N +P++ G PD+ FPR+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 274 Y 276
Y
Sbjct: 108 Y 108
Score = 37.1 bits (82), Expect = 0.47
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 423 ISS 431
ISS
Sbjct: 158 ISS 160
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/58 (70%), Positives = 43/58 (74%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGH 679
LFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILY HLF F GH
Sbjct: 102 LFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
+FV +T+F AG++ LL DRN NTSF+D GG+P+LY HLF FFGHPE
Sbjct: 193 MFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPE 252
Query: 686 VYILILPGFG 715
VY++ILP FG
Sbjct: 253 VYVIILPVFG 262
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 79 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 253 KI*DF 267
F
Sbjct: 109 NALSF 113
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/50 (70%), Positives = 41/50 (82%)
Frame = +2
Query: 566 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A +T+LL DR+ +TSF+ P GGGDPIL+ HLF FFGHPEVYILILP FG
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFG 255
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 321 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 35.5 bits (78), Expect = 1.4
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGT+Y EL +PG + +Y++I+T HA
Sbjct: 16 DIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPT 75
Query: 181 XXXXXXN*LVPLILGAPDIAFPRI 252
N +PL++ D++ PR+
Sbjct: 76 SIGGLGNWFIPLMIKIKDLSMPRL 99
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 78.6 bits (185), Expect = 2e-13
Identities = 34/49 (69%), Positives = 38/49 (77%)
Frame = +2
Query: 569 GAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
G + +LL+D + NT FFDP GDPILY HLF FFGHPEVYILILP FG
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFG 258
Score = 36.7 bits (81), Expect = 0.62
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 315 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 431
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 76.2 bits (179), Expect = 8e-13
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +2
Query: 566 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A IT++LTD++L T F+D GGDP+LY HLF FFGHPEVY++ILP FG
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFG 236
Score = 36.7 bits (81), Expect = 0.62
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +3
Query: 324 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 76.2 bits (179), Expect = 8e-13
Identities = 38/57 (66%), Positives = 41/57 (71%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFG 676
LFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILY HLF FFG
Sbjct: 184 LFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 70.1 bits (164), Expect = 5e-11
Identities = 37/97 (38%), Positives = 47/97 (48%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 15 DIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPT 74
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPLY 291
N VPL++GAPD+AFPR+ F PP L+
Sbjct: 75 MIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
Score = 66.9 bits (156), Expect = 5e-10
Identities = 35/63 (55%), Positives = 39/63 (61%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 423 ISS 431
+SS
Sbjct: 156 LSS 158
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/53 (69%), Positives = 39/53 (73%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF 664
LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILY HLF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/70 (50%), Positives = 41/70 (58%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 259 *DFDSYPPPL 288
F PP L
Sbjct: 83 MSFWFLPPSL 92
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 74.5 bits (175), Expect = 3e-12
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = +2
Query: 599 NLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
N T+FFDPAGGGD IL+ HLF FFGHPEVYILILPGFG
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFG 229
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 74.5 bits (175), Expect = 3e-12
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = +2
Query: 518 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYIL 697
++ +T+F ++ DR+ NT FF+ + GDP+LY HLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 698 ILPGFG 715
ILPGFG
Sbjct: 253 ILPGFG 258
Score = 40.7 bits (91), Expect = 0.038
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 74.5 bits (175), Expect = 3e-12
Identities = 35/53 (66%), Positives = 39/53 (73%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF 664
LFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILY HLF
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/63 (55%), Positives = 37/63 (58%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 423 ISS 431
ISS
Sbjct: 155 ISS 157
Score = 59.7 bits (138), Expect = 8e-08
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 74.1 bits (174), Expect = 3e-12
Identities = 40/94 (42%), Positives = 47/94 (50%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 3 DIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPI 62
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPP 282
N L+PL++GAPD+AFPR+ F PP
Sbjct: 63 MIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPP 96
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +3
Query: 312 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISS 146
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 625
LFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 172 LFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/66 (53%), Positives = 43/66 (65%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY HLF FFG
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTV 243
Query: 686 VYILIL 703
I++L
Sbjct: 244 ATIIML 249
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/63 (55%), Positives = 38/63 (60%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 423 ISS 431
ISS
Sbjct: 156 ISS 158
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DI LY EL PGS L G+ Q++N +V HA
Sbjct: 13 DIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVM 72
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRI 252
N L+PL++GA D AFPRI
Sbjct: 73 PALIGGFGNYLLPLMIGATDTAFPRI 98
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 70.1 bits (164), Expect = 5e-11
Identities = 27/51 (52%), Positives = 40/51 (78%)
Frame = +2
Query: 566 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGY 718
AGA+T+L D+ L T+FF+PA GGDP++Y ++F F+ HP VY+ +LP FG+
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGF 209
Score = 38.7 bits (86), Expect = 0.15
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 91 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
PG + D + YN ++T H N L+PL++GA D+AFPR+
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRL 55
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 69.3 bits (162), Expect = 9e-11
Identities = 34/70 (48%), Positives = 44/70 (62%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV ++ +T+F A T L+ DR + T FF+PA GGD +L+ HLF FFGHPE
Sbjct: 199 LFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPE 258
Query: 686 VYILILPGFG 715
VYI+ LP G
Sbjct: 259 VYIIFLPAVG 268
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 69.3 bits (162), Expect = 9e-11
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A+ +LL DR L ++FFDP GG +L+ H F FGHPEVYILILPGFG
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFG 271
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
AIT LL DRN+N++ +D G DP+LY HLF FFGHPEVY++ILP FG
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFG 262
Score = 33.5 bits (73), Expect = 5.8
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +3
Query: 330 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 431
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGY 718
A+ ++ DR+ T+FF+ A GGDPIL HLF FFGHPEVY+LI+P FG+
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGF 414
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/50 (58%), Positives = 36/50 (72%)
Frame = +2
Query: 566 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A A+ +L D TSFF+P GGGDP++Y HLF F+ HP VYI+ILP FG
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFG 263
Score = 33.5 bits (73), Expect = 5.8
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
EL P ++YN ++T H N L+PL++G D+AFPR+
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 259 *DFDSYPP 282
F PP
Sbjct: 114 VAFWLTPP 121
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/72 (45%), Positives = 41/72 (56%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 259 *DFDSYPPPLYY 294
F +P +Y
Sbjct: 84 MSFGFFPLHWHY 95
Score = 33.1 bits (72), Expect = 7.6
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 378 GRSVDLAIFSLHLAGISS 431
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/57 (57%), Positives = 38/57 (66%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFG 676
LFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY HLF FFG
Sbjct: 184 LFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 423 ISS 431
ISS
Sbjct: 156 ISS 158
Score = 41.5 bits (93), Expect = 0.022
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DI LY EL PG L G++Q++N +V HA
Sbjct: 13 DIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVM 72
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRI 252
N ++PL++GA D AFPRI
Sbjct: 73 PALIGGFGNYMLPLMIGATDTAFPRI 98
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +2
Query: 569 GAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGYNFSYYF 736
G +LL D + TSFF P GGGDP+L+ H F F+ HP VY+L+LP FG FS F
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGI-FSELF 284
Score = 33.9 bits (74), Expect = 4.4
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL P + + D +YN + T H N L+P ++GAPD+AFP++
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKL 120
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A+ +LL DRN T+FF AGG DPI + HLF FFGHPEVY+L+LP G
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMG 306
Score = 34.3 bits (75), Expect = 3.3
Identities = 24/94 (25%), Positives = 33/94 (35%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIG LY EL + +YN ++T+H
Sbjct: 70 DIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPM 129
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPP 282
N +PL++ A D+AFPRI F PP
Sbjct: 130 IAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPP 162
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 66.5 bits (155), Expect = 7e-10
Identities = 36/69 (52%), Positives = 42/69 (60%)
Frame = +1
Query: 76 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIK 255
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 256 I*DFDSYPP 282
F PP
Sbjct: 100 NMSFWLLPP 108
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 66.5 bits (155), Expect = 7e-10
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = +2
Query: 566 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG--YNFSYYFT 739
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G Y F+
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMVPRFS 264
Query: 740 RK 745
RK
Sbjct: 265 RK 266
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 569 GAITILLTDRNL-NTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGYNFSYYFTRK 745
G + +L+T NL FDPA GGDP+L+ HLF F+ HP VYI++LP FG T
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVATYS 288
Query: 746 RK 751
RK
Sbjct: 289 RK 290
Score = 40.3 bits (90), Expect = 0.050
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
EL PG I D YN T H N ++PL+LGA D+AFPR+ +
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNL 129
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGH-- 679
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY H+F FFG
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIW 260
Query: 680 PEVYILIL 703
P + I+I+
Sbjct: 261 PIIIIIII 268
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 423 ISS 431
+SS
Sbjct: 173 LSS 175
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 88 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 64.9 bits (151), Expect = 2e-09
Identities = 35/63 (55%), Positives = 37/63 (58%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P NI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 423 ISS 431
ISS
Sbjct: 155 ISS 157
Score = 59.7 bits (138), Expect = 8e-08
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 64.1 bits (149), Expect = 4e-09
Identities = 35/70 (50%), Positives = 39/70 (55%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV + AF A LL DR+ T FF P GGD +L+ HLF FFGHPE
Sbjct: 201 LFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPE 260
Query: 686 VYILILPGFG 715
VYILILP G
Sbjct: 261 VYILILPTMG 270
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/57 (59%), Positives = 38/57 (66%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGYNFSYYFTR 742
AI +LL DRN TSFF AG G IL+ HLF FFGHPEVYI++LP G SY R
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGI-ISYILPR 345
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/94 (29%), Positives = 39/94 (41%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXX 180
DIG LY EL +PG + + YN+++T+H
Sbjct: 96 DIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPI 155
Query: 181 XXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPP 282
N L+PL++GA D+AFPRI F PP
Sbjct: 156 IAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPP 188
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 63.7 bits (148), Expect = 5e-09
Identities = 31/52 (59%), Positives = 33/52 (63%)
Frame = +1
Query: 598 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWV*FLILFHKKEEK 753
K KYIIF S W F+STFILIFWT SLYFNFT IW F F K +K
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKK 58
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LF AV TA A +T+ + DRN NTSFF+ AGGGD +LY HLF ++ HPE
Sbjct: 189 LFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPE 248
Query: 686 VYILIL 703
V I+ L
Sbjct: 249 VKIICL 254
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = +3
Query: 255 NIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
NI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 105 NISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSS 163
Score = 43.2 bits (97), Expect = 0.007
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 18 DIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVM 77
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRI 252
N L+PL+LGA D+AF R+
Sbjct: 78 PALVGGFGNYLMPLMLGASDMAFARL 103
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Frame = +2
Query: 566 AGAITILLTDRNLNTSFF-----DPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
AGAI +LL +R+L FF DPA GDP L+ H+F FFGHPEVYIL+LP G
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMG 262
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 63.3 bits (147), Expect = 6e-09
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Frame = +2
Query: 575 ITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGYNFSY---YFTRK 745
+ +++ DR T+FF+P GG+ +++ HLF FGHPEVYILILP FG FS F RK
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGI-FSEVIPVFARK 273
Query: 746 R 748
R
Sbjct: 274 R 274
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/80 (43%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Frame = +2
Query: 527 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYPHLF*FFGHPEVY 691
+TA A +LL DR+ T FF GGGDPIL+ HLF FGHPEVY
Sbjct: 223 LTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVY 282
Query: 692 ILILPGFGY--NFSYYFTRK 745
I+ILP +G + +F RK
Sbjct: 283 IMILPAWGILGDVLSFFARK 302
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 61.7 bits (143), Expect = 2e-08
Identities = 34/67 (50%), Positives = 38/67 (56%), Gaps = 10/67 (14%)
Frame = +2
Query: 581 ILLTDRNLNTSFFDPA----------GGGDPILYPHLF*FFGHPEVYILILPGFGYNFSY 730
+LL DR L TSFF P GGG P+L+ HLF FFGHPEVYI+ LP FG
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 731 YFTRKRK 751
T RK
Sbjct: 298 ISTHARK 304
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = +2
Query: 581 ILLTDRNLNTSFF-DPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALG 260
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +1
Query: 511 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 678
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/55 (52%), Positives = 32/55 (58%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 407
P N+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 59.7 bits (138), Expect = 8e-08
Identities = 31/70 (44%), Positives = 35/70 (50%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV TA + +R T FFD A GG P+L+ LF FFGHPE
Sbjct: 181 LFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPE 240
Query: 686 VYILILPGFG 715
VYILILP G
Sbjct: 241 VYILILPAMG 250
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 59.7 bits (138), Expect = 8e-08
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 12 DIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVM 71
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N LVP+++GAPD+AFPR+ F PP L
Sbjct: 72 PAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 309 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 58.4 bits (135), Expect = 2e-07
Identities = 33/78 (42%), Positives = 40/78 (51%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
+FV AV + +F A +L DR FF A GDPIL+ HLF FFGHPE
Sbjct: 206 IFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPE 264
Query: 686 VYILILPGFGYNFSYYFT 739
VYI+ +P G S T
Sbjct: 265 VYIIFIPALGMVSSIIIT 282
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A +L DRN T FFD A GG P+L+ HLF F HP VY+++LP G
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMG 288
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 57.6 bits (133), Expect = 3e-07
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +2
Query: 593 DRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILP 706
+R + FFDP GGDP+L+ HLF FGHPEVYI+ LP
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLP 291
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A+ +L+ DR +FF+ GG + Y HLF FGHPEVYILILP G
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMG 272
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A +L +R+ FF GGDP+L+ HLF FFGHPEVYI+ LP G
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAG 278
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXX 174
DIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 16 DIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVM 75
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRIKI*DFDSYPPPL 288
N VP+++G+PD+AFPR+ F PP L
Sbjct: 76 PAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 57.2 bits (132), Expect = 4e-07
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF 664
LFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY H+F
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +3
Query: 243 PTNKNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 422
P N+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 423 ISS 431
+SS
Sbjct: 173 LSS 175
Score = 41.1 bits (92), Expect = 0.029
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 88 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRI
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRI 115
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +2
Query: 584 LLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
+L DR L +DPA GG +L+ HLF FFGHPEVY+L LP FG
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFG 277
Score = 33.5 bits (73), Expect = 5.8
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 76 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRL 122
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGYNFSYYFTRKRK 751
A+T+L D+ + T FFD A GGD + Y +LF F+ HP VY++ LP F T R
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVATFARN 264
Query: 752 K 754
+
Sbjct: 265 R 265
Score = 36.7 bits (81), Expect = 0.62
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 79 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL G I DD +YNT + H N +PL++GA D+AFPR+
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRV 100
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +2
Query: 581 ILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
+L +R L FFD GGDP+L+ HLF FGHPEVYI+ LP G
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAG 294
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 56.0 bits (129), Expect = 9e-07
Identities = 36/92 (39%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYP 655
L + A ITA A +L+ DR+L TSFF AG GG P+L+
Sbjct: 235 LTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQ 294
Query: 656 HLF*FFGHPEVYILILPGFGYNFSYYFTRKRK 751
HLF F GHPEVYI+++P G T RK
Sbjct: 295 HLFWFLGHPEVYIVLIPALGITSEVIATNARK 326
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +2
Query: 569 GAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FG
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFG 297
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A +L +R + FF GGDP+L+ HLF FFGHPEVYI+ LP G
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAG 337
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 55.2 bits (127), Expect = 2e-06
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A ++L +R + S+F+PA GGDP+L+ F F+ HP VY+++LP G
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLG 262
Score = 33.5 bits (73), Expect = 5.8
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
+L P + + YN I+T H N +VPL+LGA D+A PR+
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRV 109
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGY 718
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG+
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGF 316
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFG 296
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV ++ T+ ++ ++ + FDPA GGDP+L+ H F F+ HP
Sbjct: 202 LFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPA 261
Query: 686 VYILILP 706
VYI++LP
Sbjct: 262 VYIMVLP 268
Score = 40.7 bits (91), Expect = 0.038
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 79 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
EL PG I D YN + T H N L+P+++GA D+AFP++ +
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 259 *DFDSY 276
F Y
Sbjct: 123 LSFYVY 128
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +2
Query: 581 ILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
+L +R + FF A GGD +L+ HLF FGHPEVYI+ LP G
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAG 268
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 53.2 bits (122), Expect = 7e-06
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILY 652
L + A+ ITA A ++L DR + T FF P AGGG P+L+
Sbjct: 221 LTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLW 280
Query: 653 PHLF*FFGHPEVYILILPGFG 715
HLF F+ HP VYI+ILP G
Sbjct: 281 QHLFWFYSHPAVYIMILPAMG 301
Score = 33.1 bits (72), Expect = 7.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 115 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIKI 258
+ Y +VT HA N L+PL++GA D+AFP + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNM 133
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 52.8 bits (121), Expect = 9e-06
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FG
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFG 292
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +2
Query: 581 ILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
+L +R FF A GGD +L+ HLF FGHPEVYI+ LP G
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAG 268
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 52.0 bits (119), Expect = 2e-05
Identities = 29/59 (49%), Positives = 33/59 (55%), Gaps = 11/59 (18%)
Frame = +2
Query: 572 AITILLTDRNLNTSFFDPAG-----------GGDPILYPHLF*FFGHPEVYILILPGFG 715
A +L DR TSFF P+G GG +L+ HLF FFGHPEVYI ILP G
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMG 300
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LF ++ IT AG IT+LL+DRN N FF GG PIL+ ++ FGH +
Sbjct: 16 LFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTD 75
Query: 686 VYILIL 703
V LIL
Sbjct: 76 VLFLIL 81
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 50.8 bits (116), Expect = 4e-05
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +2
Query: 584 LLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
+ DR L+T F+ GG +LY +L +GHPEVYILILP FG
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFG 291
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 50.0 bits (114), Expect = 6e-05
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPE 685
LFV AV A G +LL ++ S++ GG +++ +LF +FGHPE
Sbjct: 213 LFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPE 271
Query: 686 VYILILPGFGYNFSY 730
VY+L+LPG G F Y
Sbjct: 272 VYLLLLPGTGAMFDY 286
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +2
Query: 584 LLTDRNLNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFG 715
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFG 316
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +3
Query: 321 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 431
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 33.1 bits (72), Expect = 7.6
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 566 AGAITILLTDRNLNTSFFDPAGGGDPILYPHLF*F 670
A AIT+L R N SFF P G P +P F F
Sbjct: 193 AAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +1
Query: 514 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 666
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +2
Query: 602 LNTSFFDPAGGGDPILYPHLF*FFGHPEVYILILPGFGYNFSYYFTRKRK 751
L S F+P GG P+LY F F+ HP VY+++LP G T RK
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVASTMARK 282
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +3
Query: 351 PLSSNIAHRGRSVDLAIFSLHLAGISS 431
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 44.8 bits (101), Expect = 0.002
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 629 GGGDPILYPHLF*FFGHPEVYILILPGFG 715
GGG P+L+ HLF F+ HP VYI++LP G
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMG 304
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Frame = +2
Query: 506 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILY 652
+F ++ +T + A+ IL +D L T++F D G +L+
Sbjct: 194 IFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLW 253
Query: 653 PHLF*FFGHPEVYILILPGFG 715
HLF FFGHPEVYI+ P G
Sbjct: 254 AHLFWFFGHPEVYIVFFPALG 274
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 43.2 bits (97), Expect = 0.007
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 DIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXX 174
DI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 18 DIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVM 77
Query: 175 XXXXXXXXN*LVPLILGAPDIAFPRI 252
N L+PL+LGA D+AF R+
Sbjct: 78 PALVGGFGNYLMPLMLGASDMAFARL 103
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 40.7 bits (91), Expect = 0.038
Identities = 19/29 (65%), Positives = 22/29 (75%), Gaps = 3/29 (10%)
Frame = +2
Query: 668 FFGHPEVYILILPGFG---YNFSYYFTRK 745
FFGHPEVYILILPGFG + +YY +K
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKK 30
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 40.3 bits (90), Expect = 0.050
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +1
Query: 79 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 252
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 253 KI*DFDSYPPPL 288
F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 36.3 bits (80), Expect = 0.82
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 668 FFGHPEVYILILPGFG 715
FFGHPEVY+LILP FG
Sbjct: 1 FFGHPEVYVLILPVFG 16
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 611 SFFDPAGGGDPILYPHLF*FFGHPEVYILILPGF 712
S F G P+ Y F F HPEVY+ ILP F
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAF 344
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 34.3 bits (75), Expect = 3.3
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 632 GGDPILYPHLF*FFGHPEVYILILPGF--GYNF 724
G DP+L LF F GHP VY +LP + YNF
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNF 256
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 34.3 bits (75), Expect = 3.3
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +2
Query: 254 KYKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 412
++KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 83 QFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.1 bits (72), Expect = 7.6
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +1
Query: 526 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 705
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 706 RI 711
I
Sbjct: 154 SI 155
>UniRef50_Q8I425 Cluster: Putative uncharacterized protein PFE0385w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFE0385w - Plasmodium falciparum
(isolate 3D7)
Length = 1527
Score = 33.1 bits (72), Expect = 7.6
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -1
Query: 750 FLFLVK*YEKLYPNPGKIKI*TSGCPKNQNKCGYKIGSPPPAGSKNDVFKFRSVNNIVIA 571
+L+ ++ LY + GK+K+ +G N K G I SP ++ND + NNI
Sbjct: 1109 YLYKIEIPTNLYRDEGKLKVNPTG-DINVQKGGDSINSPGNNRNRNDTNNSGNNNNINDG 1167
Query: 570 PAKTGSDNNNKN 535
+ +N+N+N
Sbjct: 1168 SNNSNRNNSNRN 1179
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,607,911
Number of Sequences: 1657284
Number of extensions: 10797338
Number of successful extensions: 23355
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 22312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23295
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -