Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021186
         (756 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   1.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   7.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.4  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 214 LILGAPDIAFPRIKI*DFDSYPP 282
           LI   PD +FP + + DF+S+ P
Sbjct: 127 LINQIPDKSFPGVGVIDFESWRP 149


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 731 NMRNYTQILVKLKYKLQDVQ 672
           NMR Y     KL Y ++DV+
Sbjct: 210 NMREYNDPEYKLDYFMEDVE 229


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 669 NQNKCGYKIGSPPPAGS 619
           + ++ G KIGSP PA S
Sbjct: 649 SSSRRGSKIGSPTPAES 665


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,878
Number of Sequences: 438
Number of extensions: 3771
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)