Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021183
(825 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_214| Best HMM Match : Arf (HMM E-Value=0) 132 3e-31
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 74 2e-13
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 70 2e-12
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 70 3e-12
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 69 3e-12
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 69 6e-12
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 68 1e-11
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 68 1e-11
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 62 4e-10
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 61 9e-10
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 54 1e-07
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_51549| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.070
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 33 0.28
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.37
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 32 0.49
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 32 0.49
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 32 0.65
SB_38601| Best HMM Match : MMR_HSR1 (HMM E-Value=0.055) 31 0.86
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 31 0.86
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 29 3.5
SB_36756| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 4.6
SB_36342| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 29 4.6
SB_35858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_52473| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0026) 29 6.1
SB_35763| Best HMM Match : DUF651 (HMM E-Value=0.26) 28 8.0
SB_7573| Best HMM Match : Nucleoporin (HMM E-Value=0.21) 28 8.0
SB_26113| Best HMM Match : CcmD (HMM E-Value=6.7) 28 8.0
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 132 bits (319), Expect = 3e-31
Identities = 60/83 (72%), Positives = 68/83 (81%)
Frame = +2
Query: 257 MRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCP 436
MRFTTFDLGGH+QARR+W+DYFPAV+ IVF++D D RL ESK ELDSLL DE LS+CP
Sbjct: 20 MRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKKELDSLLADEQLSSCP 79
Query: 437 VLILGNKIDKPGAASEDELRHFF 505
VLILGNKID PGA ED +R F
Sbjct: 80 VLILGNKIDIPGAVGEDYIRQNF 102
Score = 78.6 bits (185), Expect = 6e-15
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +1
Query: 502 FQLYQQTTGKGKVSRSELPGRPLELFMCSVLKRQGYGEGFRWLAQYI 642
F L+ QTTGKG V+ +L RP+ELFMCSVLKR+GYGEGFRWL++YI
Sbjct: 102 FGLFGQTTGKGSVAAKDLATRPMELFMCSVLKREGYGEGFRWLSEYI 148
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +3
Query: 201 LAQHVPTLHPTSEELSIG 254
+AQHVPTLHPTSEELS+G
Sbjct: 1 MAQHVPTLHPTSEELSMG 18
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 73.7 bits (173), Expect = 2e-13
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +2
Query: 251 RRMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSN 430
+ ++FT +D+GG + R +WR YF ++F+VD+ DR R+ E+K EL LL +E L
Sbjct: 132 KNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKR 191
Query: 431 CPVLILGNKIDKPGAASEDEL 493
+L+L NK D P + S EL
Sbjct: 192 AALLVLANKQDLPDSMSTTEL 212
Score = 36.7 bits (81), Expect = 0.023
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +3
Query: 114 LWKKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTL 224
L K +LL +GLD AGKTT+L+ LK D +PT+
Sbjct: 86 LGKDELRLLMVGLDAAGKTTILYHLKLDEPVNTIPTI 122
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 72.9 bits (171), Expect = 3e-13
Identities = 31/81 (38%), Positives = 51/81 (62%)
Frame = +2
Query: 251 RRMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSN 430
+ + FT +D+GG + R +WR YF ++++VD+ DR R+ ESK EL+ +L ++ L +
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKD 118
Query: 431 CPVLILGNKIDKPGAASEDEL 493
VL++ NK D P A S E+
Sbjct: 119 AVVLVMANKQDLPNALSVSEI 139
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 120 KKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTL 224
KK ++L +GLD AGKTT+L+ LK + +PT+
Sbjct: 15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/81 (35%), Positives = 50/81 (61%)
Frame = +2
Query: 251 RRMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSN 430
+ + F+ +D+GG + RR+WR YF + I+F+VD+ D+ R+ E + EL +L L+
Sbjct: 152 KNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNG 211
Query: 431 CPVLILGNKIDKPGAASEDEL 493
PV+++ NK D GA D++
Sbjct: 212 VPVVVVANKQDLLGAIGPDKM 232
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 69.7 bits (163), Expect = 3e-12
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +2
Query: 251 RRMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSN 430
+ + FT +D+GG + R +WR Y+ I+F+VD+ DR R E++ EL LL +E L
Sbjct: 38 KNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQ 97
Query: 431 CPVLILGNKIDKPGAASEDELR 496
+L++ NK D A + E+R
Sbjct: 98 VILLVIANKQDMANAMTASEIR 119
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 144 LGLDNAGKTTLLHMLKDDRLAQHVPTL 224
+GLDNAGKTT+L+ LK + + VPTL
Sbjct: 2 IGLDNAGKTTILYRLKLEEVVSTVPTL 28
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/82 (41%), Positives = 47/82 (57%)
Frame = +2
Query: 272 FDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILG 451
+D+GG + R +W Y V+ IV++VDA D +L SK EL +LL L+ P+L+LG
Sbjct: 70 WDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLG 129
Query: 452 NKIDKPGAASEDELRHFFNCIS 517
NK D P + E EL N S
Sbjct: 130 NKKDLPNSLDEKELVERLNLTS 151
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 ILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRLAQH-VPTLHPTSEELSI 251
ILDWF + WK+ +L +GL +GKTT ++++ + ++ +PT+ ++S
Sbjct: 8 ILDWFKSLF-----WKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVSK 62
Query: 252 G 254
G
Sbjct: 63 G 63
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 68.5 bits (160), Expect = 6e-12
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = +2
Query: 257 MRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCP 436
+RF +D+GG +Q R +W+ Y DA++++VD+ +L E++ EL +LL L+ P
Sbjct: 66 IRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAP 125
Query: 437 VLILGNKIDKPGAASEDELRHFFN 508
+LI NK D P A E+ H +
Sbjct: 126 ILIFANKQDCPNAIPPREITHMLS 149
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 67.7 bits (158), Expect = 1e-11
Identities = 28/81 (34%), Positives = 48/81 (59%)
Frame = +2
Query: 251 RRMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSN 430
+ + T +D+GG + R +WR YF + ++F+VD+ D R+PE+K EL +L + +
Sbjct: 62 KNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRD 121
Query: 431 CPVLILGNKIDKPGAASEDEL 493
PV+++ NK D P A E+
Sbjct: 122 VPVVVVANKQDLPNALKAGEM 142
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 132 KLLFLGLDNAGKTTLLHMLKDDRLAQHVPTL 224
+++ LGLD AGKTT+L+ LK +PT+
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKETVSTIPTI 51
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 67.7 bits (158), Expect = 1e-11
Identities = 28/81 (34%), Positives = 50/81 (61%)
Frame = +2
Query: 251 RRMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSN 430
+ + FT +D+GG + R +WR YF ++F+VD+ DR R+ E++ EL+ +L ++ L +
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRD 118
Query: 431 CPVLILGNKIDKPGAASEDEL 493
+L+ NK D P A + E+
Sbjct: 119 AVLLVFANKQDLPNAMNAAEI 139
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 105 FLGLW-KKSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTL 224
F GL+ KK ++L +GLD AGKTT+L+ LK + +PT+
Sbjct: 9 FAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 236 RGTVNRRMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTD 415
R + RR D+GG + R +WR YF ++F+VD DR R+ E++ EL ++ D
Sbjct: 130 RDGMQRRDNNALLDVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIIND 189
Query: 416 ETLSNCPVLILGNKIDKP 469
+ + +LI NK D P
Sbjct: 190 REMKDVIILIFANKQDLP 207
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 61.3 bits (142), Expect = 9e-10
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 251 RRMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSN 430
+ + FT +D+GG + R +WR YF ++F+VD+ DR R E+K EL +L ++ L +
Sbjct: 508 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAEDELRD 567
Query: 431 CPVLILGNK 457
+L+ NK
Sbjct: 568 AVLLVFANK 576
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 56.4 bits (130), Expect = 3e-08
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +2
Query: 257 MRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCP 436
+ +++GG ++ R W ++ +V++VD+ D R ES+ L SLL++ L+ P
Sbjct: 213 LNLNIWEIGGDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVP 272
Query: 437 VLILGNKIDKPGAASEDEL 493
VL++ +K D PGA E+
Sbjct: 273 VLLVASKQDLPGARQLSEI 291
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 54.4 bits (125), Expect = 1e-07
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +2
Query: 284 GHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLILGNKID 463
G R WR Y+ DA++++VD+ D+ R+ SK EL ++L ++ L +++ NK D
Sbjct: 155 GQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANKQD 214
Query: 464 KPGAASEDEL 493
GA S E+
Sbjct: 215 MEGAMSSSEV 224
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 52.4 bits (120), Expect = 4e-07
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 260 RFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDE 418
+ +D+GG + R WR+YF + D ++++VD+ D+ RL + K EL LL +E
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/78 (30%), Positives = 36/78 (46%)
Frame = +2
Query: 260 RFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPV 439
R +D+GG ++ R W++YF D + ELD LL +E L P+
Sbjct: 63 RLNVWDIGGQRKIRPYWKNYFENTDIL-----------------ELDELLEEEKLIGVPL 105
Query: 440 LILGNKIDKPGAASEDEL 493
L+ NK D AA+ E+
Sbjct: 106 LVFANKQDLMNAATPAEI 123
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 132 KLLFLGLDNAGKTTLLHMLKDDRLAQHVPT 221
++L LGLDN+GKTT+L L + + PT
Sbjct: 19 RILLLGLDNSGKTTILKSLASEDVLHITPT 48
>SB_51549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 630
Score = 35.1 bits (77), Expect = 0.070
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = -3
Query: 316 VAPHTTRLLMPTEVERRETHTPIDSSSDVGCKVGTC*ASLSSFNMCKSVVFPALSSPRNK 137
VAP + LL+P +E R T + DV C V C++V+F A+S NK
Sbjct: 177 VAPISWMLLLPQTLEARLTGIRLQFGHDVFCFVAVFLIPYVIITYCQTVMFRAVSRSNNK 236
Query: 136 SL 131
+L
Sbjct: 237 AL 238
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Frame = +2
Query: 263 FTTFDLGGHQQARRVWRDYFPAVDAIVF----------LVDACDRPRLPESKAELDSLLT 412
F D+GG + RR W F V +I+F LV++ R+ ESKA +++T
Sbjct: 195 FRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDSENRMEESKALFRTIIT 254
Query: 413 DETLSNCPVLILGNKID 463
N +++ NK D
Sbjct: 255 YPWFQNSSIILFLNKKD 271
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 10/79 (12%)
Frame = +2
Query: 257 MRFTTFDLGGHQQARRVWRDYFPAVDAIVF--------LVDACDRP--RLPESKAELDSL 406
+ F FD+GG + R+ W F V AI+F LV A D R+ ES DS+
Sbjct: 194 LHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMMESMKLFDSI 253
Query: 407 LTDETLSNCPVLILGNKID 463
++ ++ +++ NK D
Sbjct: 254 CNNKWFTDTSIILFLNKKD 272
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 5/32 (15%)
Frame = +3
Query: 111 GLWKKSGK-----LLFLGLDNAGKTTLLHMLK 191
GLWK + +L LGLDNAGKTTLL +K
Sbjct: 11 GLWKYLFQKDEYFILILGLDNAGKTTLLEQIK 42
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 33.1 bits (72), Expect = 0.28
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Frame = +2
Query: 251 RRMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV--DACD--------RPRLPESKAELD 400
+R+ F FD+GG + R+ W F V AI++ V A D R+ ES +
Sbjct: 241 KRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLTLEEDESTNRMEESLKLFE 300
Query: 401 SLLTDETLSNCPVLILGNKID 463
S++ ++ + V++ NK D
Sbjct: 301 SIINNKWFVDTSVILFLNKKD 321
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 33.1 bits (72), Expect = 0.28
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Frame = +2
Query: 251 RRMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV--DACD--------RPRLPESKAELD 400
+R+ F FD+GG + R+ W F V AI++ V A D R+ ES +
Sbjct: 193 KRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCVALSAYDLSLEEDESTNRMEESLKLFE 252
Query: 401 SLLTDETLSNCPVLILGNKID 463
S++ ++ + V++ NK D
Sbjct: 253 SIINNKWFVDTSVILFLNKKD 273
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 32.7 bits (71), Expect = 0.37
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +2
Query: 233 IRGTVNRRMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPES---KAELDS 403
I+ N +R + + G ++ + R Y+ DA V L D + L + K +LDS
Sbjct: 60 IQWAQNTTIRLQIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDS 119
Query: 404 LLTDETLSNCPVLILGNKIDKPGAASEDEL 493
+ P +++GNK D P + E+
Sbjct: 120 KYKLHSRKPVPCILVGNKSDLPDRPVDKEI 149
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 32.3 bits (70), Expect = 0.49
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 248 NRRMRFTTFDLGGHQQARRVWRDYF 322
+R ++FT +D+GG Q+ R +WR Y+
Sbjct: 230 HRSLKFTIWDVGGLQKLRPLWRHYY 254
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 132 KLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGVCVSRRSTSVGIS 293
KL+ +G+ GKTTLL LK L ++ T+ +E S+ + S S +GI+
Sbjct: 668 KLMVVGIQGYGKTTLLAALKGQPLPSNLSTVGIVVDEWSVQISTSLLS-RIGIT 720
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 275 DLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPE----SKAELDSLLTDETLSNCPVL 442
D+GG + R+ W +F V A+VF E + A LDSL E +++C L
Sbjct: 168 DVGGQKNQRKKWIHFFDGVTAVVFFASLSSYDEQLEEEEDTNAMLDSLDLFEEITHCEFL 227
>SB_38601| Best HMM Match : MMR_HSR1 (HMM E-Value=0.055)
Length = 882
Score = 31.5 bits (68), Expect = 0.86
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3
Query: 132 KLLFLGLDNAGKTTLLHMLKDD 197
KL+F+G+ N GKTTLL+ L+ +
Sbjct: 2 KLMFVGVSNIGKTTLLNQLRQE 23
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 31.5 bits (68), Expect = 0.86
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 254 RMRFTTFDLGGHQQARRVWRDYFPAV 331
R T +DLGG + R +W+DY+ V
Sbjct: 3 RFNVTVYDLGGGAKIRGIWKDYYAEV 28
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/71 (19%), Positives = 32/71 (45%)
Frame = +2
Query: 254 RMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNC 433
+ + +D G ++ R + Y+ ++ + D R + + L+ + T +
Sbjct: 56 KAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDI 115
Query: 434 PVLILGNKIDK 466
+++GNKIDK
Sbjct: 116 VKMLVGNKIDK 126
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 254 RMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNC 433
R+ T +D GH+ V + VD ++ D RP+ +S E + + N
Sbjct: 279 RIELTLWDTSGHEDYDHVRPLSYNNVDIVLICFDI-SRPKTADSILEKWIIEVCDLCPNK 337
Query: 434 PVLILGNKID 463
PVL++G K D
Sbjct: 338 PVLLVGCKQD 347
>SB_36756| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 638
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 362 DRPRLPESKAELDSLLT 412
+ PRLPE+KA LD+LLT
Sbjct: 294 EMPRLPEAKATLDTLLT 310
>SB_36342| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 872
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 504 SIVSADHWKGKSIKVRATRSAAGAFHVLGAEASGLRRGLPLARAVHR 644
++ SAD G+S+ R G V G EAS GLPL R +
Sbjct: 4 AVDSADEVSGRSVCARMLMKTVGRRDVSGPEASFELSGLPLWRCTRQ 50
>SB_35858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 263 FTTFDLGG-HQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLT 412
FTTFDLGG ++ +WR + AI+ L + + E +LD L+T
Sbjct: 418 FTTFDLGGCMKELPLIWRSFSTESKAILPLCFL--KSQFLEEPVDLDELMT 466
>SB_52473| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0026)
Length = 936
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 117 WKKSGKLLFLGLDNAGKTTLLHMLKD 194
W G + LG N+GKTTL + D
Sbjct: 281 WDHDGDIYMLGCSNSGKTTLFNTFMD 306
>SB_35763| Best HMM Match : DUF651 (HMM E-Value=0.26)
Length = 436
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 395 VQPWTPADVAGHTRRPGTLWRPPRGSSRATHD 300
+ P A ++ H RR LW+PPRG D
Sbjct: 83 LHPSLSASLSHHQRRLYGLWKPPRGKKNILTD 114
>SB_7573| Best HMM Match : Nucleoporin (HMM E-Value=0.21)
Length = 928
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +3
Query: 123 KSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGVCVSRRSTSVGISRRV 302
K+G+LL L K H+LK D L P L + VCVS T VG+ +
Sbjct: 341 KAGELLTLAKKTVNKAEQTHLLK-DALQCGYPCWFVFPVRLPMLVCVSSVVTHVGVCFQH 399
Query: 303 VC 308
C
Sbjct: 400 QC 401
>SB_26113| Best HMM Match : CcmD (HMM E-Value=6.7)
Length = 198
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2
Query: 371 VAGHTRRPGTLWRPPRGSSRATHDAPADAHRGRTS*NAY 255
V GH G +WR G +APA RGR AY
Sbjct: 152 VDGHAGTMGGMWRSRGGRQEIAKNAPACFGRGRKVRKAY 190
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,003,849
Number of Sequences: 59808
Number of extensions: 483493
Number of successful extensions: 1569
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2311562737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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