Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021181
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.76 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   3.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   4.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   4.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   4.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   4.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   4.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   4.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.1  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   4.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   4.1  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   7.1  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   9.4  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +3

Query: 147 WINEIPTVPI 176
           W+NEIPT+P+
Sbjct: 321 WLNEIPTMPV 330


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 316 SSLKNHYFHCFITYSVGRK 372
           SS    +FHC+     GRK
Sbjct: 416 SSFFQQFFHCYCPIKFGRK 434


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 391 YYRPRTASAQPSK 353
           YYRPRT+  +P +
Sbjct: 232 YYRPRTSRTEPPR 244


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 534 SLTDVPPQSTPRLAVSSN 481
           S    PP+STP L+  SN
Sbjct: 117 STNGAPPRSTPPLSTPSN 134


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 534 SLTDVPPQSTPRLAVSSN 481
           S    PP+STP L+  SN
Sbjct: 117 STNGAPPRSTPPLSTPSN 134


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 534 SLTDVPPQSTPRLAVSSN 481
           S    PP+STP L+  SN
Sbjct: 117 STNGAPPRSTPPLSTPSN 134


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 534 SLTDVPPQSTPRLAVSSN 481
           S    PP+STP L+  SN
Sbjct: 117 STNGAPPRSTPPLSTPSN 134


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 534 SLTDVPPQSTPRLAVSSN 481
           S    PP+STP L+  SN
Sbjct: 117 STNGAPPRSTPPLSTPSN 134


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 534 SLTDVPPQSTPRLAVSSN 481
           S    PP+STP L+  SN
Sbjct: 73  STNGAPPRSTPPLSTPSN 90


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 534 SLTDVPPQSTPRLAVSSN 481
           S    PP+STP L+  SN
Sbjct: 117 STNGAPPRSTPPLSTPSN 134


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 534 SLTDVPPQSTPRLAVSSN 481
           S    PP+STP L+  SN
Sbjct: 117 STNGAPPRSTPPLSTPSN 134


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 534 SLTDVPPQSTPRLAVSSN 481
           S    PP+STP L+  SN
Sbjct: 117 STNGAPPRSTPPLSTPSN 134


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 546 HLRYSLTDVPPQSTPRLAVSSNRITREF*TATS 448
           H R++ T    + TPR   +S+R  + F T  S
Sbjct: 279 HTRHTTTSHNTRGTPRTTPASSRCGQLFNTEES 311


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 120 RHLISDAHEWINEI 161
           RHLI    +W NE+
Sbjct: 91  RHLIDHKRDWWNEL 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,557
Number of Sequences: 336
Number of extensions: 3602
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)