Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021181
(684 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81649-1|CAA57309.1| 850|Homo sapiens gastric mucin protein. 33 0.95
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 32 1.7
BC042145-1|AAH42145.1| 837|Homo sapiens zinc fingers and homeob... 31 5.0
BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open read... 31 5.0
AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein. 31 5.0
AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein. 31 5.0
AB083653-1|BAC76615.1| 837|Homo sapiens transcription factor ZH... 31 5.0
AB020661-1|BAA74877.2| 868|Homo sapiens KIAA0854 protein protein. 31 5.0
>X81649-1|CAA57309.1| 850|Homo sapiens gastric mucin protein.
Length = 850
Score = 33.1 bits (72), Expect = 0.95
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 318 RSRETISHLCYTSHVSLQCQTKSSSTGSSFPADSPKP 208
R+RE S LCY + +QC T + + SS PA + P
Sbjct: 453 RNREQASGLCYNYQIRVQCCTPLACSTSSSPAQTTPP 489
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 318 RSRETISHLCYTSHVSLQCQTKSSSTGSSFPADSPKP 208
R+RE S LCY + +QC T + SS PA + P
Sbjct: 1457 RNREQASGLCYNYQIRVQCCTPLPCSTSSSPAQTTPP 1493
>BC042145-1|AAH42145.1| 837|Homo sapiens zinc fingers and
homeoboxes 2 protein.
Length = 837
Score = 30.7 bits (66), Expect = 5.0
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = -1
Query: 552 LGHLRYSLTDVPPQSTPRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAP 373
LG LT V ST VS + IT T+ PL T I + P
Sbjct: 371 LGQTSLVLTQVTSGST---TVSCSPITLAVAGVTNHGQKRPLVTPQAAPEPKRPHIAQVP 427
Query: 372 LPPNRVSNETMKVVVFQRRSRETISHL 292
PP +V+N + +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454
>BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open reading
frame 24 protein.
Length = 449
Score = 30.7 bits (66), Expect = 5.0
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 555 ALGH--LRYSLTDVPPQST-PRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADII 385
A GH L +L VP S PR A + TR AT+ + +SP+ T + +
Sbjct: 182 ATGHPSLSTALAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDT 241
Query: 384 DRAPLPPNR 358
+P+PP R
Sbjct: 242 AASPVPPMR 250
>AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein.
Length = 449
Score = 30.7 bits (66), Expect = 5.0
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 555 ALGH--LRYSLTDVPPQST-PRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADII 385
A GH L +L VP S PR A + TR AT+ + +SP+ T + +
Sbjct: 182 ATGHPSLSTALAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDT 241
Query: 384 DRAPLPPNR 358
+P+PP R
Sbjct: 242 AASPVPPMR 250
>AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein.
Length = 449
Score = 30.7 bits (66), Expect = 5.0
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 555 ALGH--LRYSLTDVPPQST-PRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADII 385
A GH L +L VP S PR A + TR AT+ + +SP+ T + +
Sbjct: 182 ATGHPSLSTALAQVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDT 241
Query: 384 DRAPLPPNR 358
+P+PP R
Sbjct: 242 AASPVPPMR 250
>AB083653-1|BAC76615.1| 837|Homo sapiens transcription factor ZHX2
protein.
Length = 837
Score = 30.7 bits (66), Expect = 5.0
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = -1
Query: 552 LGHLRYSLTDVPPQSTPRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAP 373
LG LT V ST VS + IT T+ PL T I + P
Sbjct: 371 LGQTSLVLTQVTSGST---TVSCSPITLAVAGVTNHGQKRPLVTPQAAPEPKRPHIAQVP 427
Query: 372 LPPNRVSNETMKVVVFQRRSRETISHL 292
PP +V+N + +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454
>AB020661-1|BAA74877.2| 868|Homo sapiens KIAA0854 protein protein.
Length = 868
Score = 30.7 bits (66), Expect = 5.0
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = -1
Query: 552 LGHLRYSLTDVPPQSTPRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAP 373
LG LT V ST VS + IT T+ PL T I + P
Sbjct: 402 LGQTSLVLTQVTSGST---TVSCSPITLAVAGVTNHGQKRPLVTPQAAPEPKRPHIAQVP 458
Query: 372 LPPNRVSNETMKVVVFQRRSRETISHL 292
PP +V+N + +++++E I+HL
Sbjct: 459 EPPPKVANPPLTPASDRKKTKEQIAHL 485
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,077,685
Number of Sequences: 237096
Number of extensions: 2357115
Number of successful extensions: 4943
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4943
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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