Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021180
         (725 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021236-1|AAX33384.1|  783|Drosophila melanogaster RH08748p pro...    29   4.9  
AE014134-211|AAF51409.2|  783|Drosophila melanogaster CG33979-PB...    29   4.9  
BT003485-1|AAO39488.1|  328|Drosophila melanogaster SD13756p pro...    29   6.4  
AY119070-1|AAM50930.1|  157|Drosophila melanogaster LP08443p pro...    29   6.4  
AF239610-1|AAF63502.1| 1361|Drosophila melanogaster SP2353 protein.    29   6.4  
AE014297-4072|AAF56669.1|  463|Drosophila melanogaster CG6066-PA...    29   6.4  
AE013599-3681|AAF47057.1|  157|Drosophila melanogaster CG11300-P...    29   6.4  
AE013599-2167|AAF58071.2| 1361|Drosophila melanogaster CG8403-PA...    29   6.4  
AE014298-1525|AAF47976.2| 1059|Drosophila melanogaster CG11203-P...    29   8.5  

>BT021236-1|AAX33384.1|  783|Drosophila melanogaster RH08748p
           protein.
          Length = 783

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 376 AHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTA 504
           AH  +  P    P    P++    + S+  +PA APKE +P A
Sbjct: 60  AHNPEDVPTSTQPNTAQPTQAEAASKSSPANPALAPKEPEPLA 102


>AE014134-211|AAF51409.2|  783|Drosophila melanogaster CG33979-PB,
           isoform B protein.
          Length = 783

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 376 AHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTA 504
           AH  +  P    P    P++    + S+  +PA APKE +P A
Sbjct: 60  AHNPEDVPTSTQPNTAQPTQAEAASKSSPANPALAPKEPEPLA 102


>BT003485-1|AAO39488.1|  328|Drosophila melanogaster SD13756p
           protein.
          Length = 328

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +1

Query: 388 KKSPNQRTPTRKSPSRKTPTNFSARKSPARAP-KEVKPTAEEHQKWFGN--HLQNAQL*N 558
           K +  +R  TR SPSR + ++ S R S +R+P +  K   +  ++W  +  H  N +  N
Sbjct: 85  KDAVPRRRRTRSSPSRSSSSSSSDRSSSSRSPSRSRKSRPKSVERWPNDRYHENNDRRQN 144

Query: 559 P 561
           P
Sbjct: 145 P 145


>AY119070-1|AAM50930.1|  157|Drosophila melanogaster LP08443p
           protein.
          Length = 157

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 382 PAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTA 504
           P   SP   TPT  +P+  TP++ +   +PA +     PT+
Sbjct: 59  PPSASPAAGTPTSPTPATGTPSSPATPDAPASSTSPATPTS 99


>AF239610-1|AAF63502.1| 1361|Drosophila melanogaster SP2353 protein.
          Length = 1361

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 382 PAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKE 489
           P+   P     T ++ +  T T  + R+SP RAPK+
Sbjct: 224 PSSVPPTPSRSTTRATASTTTTTTTTRRSPTRAPKQ 259


>AE014297-4072|AAF56669.1|  463|Drosophila melanogaster CG6066-PA
           protein.
          Length = 463

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +1

Query: 388 KKSPNQRTPTRKSPSRKTPTNFSARKSPARAP-KEVKPTAEEHQKWFGN--HLQNAQL*N 558
           K +  +R  TR SPSR + ++ S R S +R+P +  K   +  ++W  +  H  N +  N
Sbjct: 67  KDAVPRRRRTRSSPSRSSSSSSSDRSSSSRSPSRSRKSRPKSVERWPNDRYHENNDRRQN 126

Query: 559 P 561
           P
Sbjct: 127 P 127


>AE013599-3681|AAF47057.1|  157|Drosophila melanogaster CG11300-PA
           protein.
          Length = 157

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 382 PAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTA 504
           P   SP   TPT  +P+  TP++ +   +PA +     PT+
Sbjct: 59  PPSASPAAGTPTSPTPATGTPSSPATPDAPASSTSPATPTS 99


>AE013599-2167|AAF58071.2| 1361|Drosophila melanogaster CG8403-PA
           protein.
          Length = 1361

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 382 PAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKE 489
           P+   P     T ++ +  T T  + R+SP RAPK+
Sbjct: 224 PSSVPPTPSRSTTRATASTTTTTTTTRRSPTRAPKQ 259


>AE014298-1525|AAF47976.2| 1059|Drosophila melanogaster CG11203-PA
           protein.
          Length = 1059

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +1

Query: 376 AHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPT 501
           A  A  + N  T T  S S      F A+K P   PKE  PT
Sbjct: 254 AAAAAAASNASTSTSASVSATEQQQFEAQKPPPIPPKETSPT 295


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,216,588
Number of Sequences: 53049
Number of extensions: 562697
Number of successful extensions: 2343
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2320
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)