Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021180
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 32 0.36
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 31 0.84
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 31 0.84
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 30 1.5
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 1.5
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 1.5
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 1.5
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 1.5
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 30 1.9
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 30 1.9
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 30 1.9
U53337-4|AAA96186.2| 636|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 28 7.8
AF077542-6|AAC26298.1| 108|Caenorhabditis elegans Hypothetical ... 28 7.8
AF026215-1|AAB71319.1| 352|Caenorhabditis elegans Serpentine re... 28 7.8
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical protein
F40F11.2b protein.
Length = 1607
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 388 KKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEEHQK 519
K SP + TPT+ K+P K+P + P ++ P+ E +K
Sbjct: 1171 KASPAETTPTKLQLKEKSPAKTPVFKTPLQTPIKMTPSPSESRK 1214
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical protein
F40F11.2a protein.
Length = 1593
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 388 KKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEEHQK 519
K SP + TPT+ K+P K+P + P ++ P+ E +K
Sbjct: 1157 KASPAETTPTKLQLKEKSPAKTPVFKTPLQTPIKMTPSPSESRK 1200
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +1
Query: 382 PAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEEHQK 519
P KK P +K+P++K PT+ + P APK+ KPT EE K
Sbjct: 388 PKKKDPKL---AKKAPAKK-PTD---KPKPKDAPKDAKPTPEEPAK 426
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 31.1 bits (67), Expect = 0.84
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPA-RAPKEVKPTAEEHQKWF 525
S P + P PTR++PS K P R++P+ +AP V P A K F
Sbjct: 234 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAP--VAPVAPVKPKPF 284
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 373 PAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPK 486
P P KK + PT SP + TPT+ ++ AR K
Sbjct: 214 PLVPEKKPKIEDAPTTSSPKKSTPTSAPPTRASARVSK 251
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 397 PNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTA 504
P Q TP++ KTP+ + + PA +P + PT+
Sbjct: 1360 PKQPTPSKARTPSKTPSQSNRAQHPASSPAPIAPTS 1395
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 367 VSPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEEHQK 519
V+PA K SP P+ + P K+PA+ P E+ P+ +E+ K
Sbjct: 126 VNPADFFKNSP---APSASKLPKVAPKTVEKPKTPAKKPVEISPSTKENTK 173
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEEHQK 519
SP+ P KK+ ++ + P + + +KSP +PK+ K + E +K
Sbjct: 1832 SPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = +1
Query: 373 PAHPAKKSPNQ-RTPTR--KSPSRKTPTNFSA--RKSPARAPKEVK-PTAEE 510
PA P KKS N+ ++PT+ KSP + + KSP +A + K PT +E
Sbjct: 1587 PASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKE 1638
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 382 PAKKSPNQRTPTRKSPSR--KTPTNFSAR--KSPARAPKEVKPTAEEHQK 519
P +KSP + KSP++ K+P +A KSP + K + +AEE K
Sbjct: 1722 PKEKSPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPK 1771
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEE 510
SPA P KK + KSP++K + S K K T +E
Sbjct: 1411 SPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDE 1457
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 391 KSPNQRTPTRKSPSRKTPTNFSARKSPAR-APKEVK-PTAEE 510
KSP +++P + K+PT KSP + A +EVK PT +E
Sbjct: 1720 KSPKEKSPEKAEEKPKSPT--KKEKSPEKSAAEEVKSPTKKE 1759
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEEHQK 519
SP+ P KK+ ++ + P + + +KSP +PK+ K + E +K
Sbjct: 1832 SPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = +1
Query: 373 PAHPAKKSPNQ-RTPTR--KSPSRKTPTNFSA--RKSPARAPKEVK-PTAEE 510
PA P KKS N+ ++PT+ KSP + + KSP +A + K PT +E
Sbjct: 1587 PASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKE 1638
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 382 PAKKSPNQRTPTRKSPSR--KTPTNFSAR--KSPARAPKEVKPTAEEHQK 519
P +KSP + KSP++ K+P +A KSP + K + +AEE K
Sbjct: 1722 PKEKSPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPK 1771
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEE 510
SPA P KK + KSP++K + S K K T +E
Sbjct: 1411 SPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDE 1457
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 391 KSPNQRTPTRKSPSRKTPTNFSARKSPAR-APKEVK-PTAEE 510
KSP +++P + K+PT KSP + A +EVK PT +E
Sbjct: 1720 KSPKEKSPEKAEEKPKSPT--KKEKSPEKSAAEEVKSPTKKE 1759
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEEHQK 519
SP+ P KK+ ++ + P + + +KSP +PK+ K + E +K
Sbjct: 1832 SPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = +1
Query: 373 PAHPAKKSPNQ-RTPTR--KSPSRKTPTNFSA--RKSPARAPKEVK-PTAEE 510
PA P KKS N+ ++PT+ KSP + + KSP +A + K PT +E
Sbjct: 1587 PASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKE 1638
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 382 PAKKSPNQRTPTRKSPSR--KTPTNFSAR--KSPARAPKEVKPTAEEHQK 519
P +KSP + KSP++ K+P +A KSP + K + +AEE K
Sbjct: 1722 PKEKSPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPK 1771
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEE 510
SPA P KK + KSP++K + S K K T +E
Sbjct: 1411 SPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDE 1457
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 391 KSPNQRTPTRKSPSRKTPTNFSARKSPAR-APKEVK-PTAEE 510
KSP +++P + K+PT KSP + A +EVK PT +E
Sbjct: 1720 KSPKEKSPEKAEEKPKSPT--KKEKSPEKSAAEEVKSPTKKE 1759
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEEHQK 519
SP+ P KK+ ++ + P + + +KSP +PK+ K + E +K
Sbjct: 1832 SPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAEK 1881
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = +1
Query: 373 PAHPAKKSPNQ-RTPTR--KSPSRKTPTNFSA--RKSPARAPKEVK-PTAEE 510
PA P KKS N+ ++PT+ KSP + + KSP +A + K PT +E
Sbjct: 1587 PASPTKKSENEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKKE 1638
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 382 PAKKSPNQRTPTRKSPSR--KTPTNFSAR--KSPARAPKEVKPTAEEHQK 519
P +KSP + KSP++ K+P +A KSP + K + +AEE K
Sbjct: 1722 PKEKSPEKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEEKPK 1771
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEE 510
SPA P KK + KSP++K + S K K T +E
Sbjct: 1411 SPASPTKKEKSPAAEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDE 1457
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 391 KSPNQRTPTRKSPSRKTPTNFSARKSPAR-APKEVK-PTAEE 510
KSP +++P + K+PT KSP + A +EVK PT +E
Sbjct: 1720 KSPKEKSPEKAEEKPKSPT--KKEKSPEKSAAEEVKSPTKKE 1759
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEEHQK 519
SPA K + KSP R S+ +SP+R+P+ + + E ++
Sbjct: 88 SPAPKRSKETRESESPEKSPVRSRSPRRSSARSPSRSPRRRRERSSERKQ 137
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEEHQK 519
SPA K + KSP R S+ +SP+R+P+ + + E ++
Sbjct: 88 SPAPKRSKETRESESPEKSPVRSRSPRRSSARSPSRSPRRRRERSSERKQ 137
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPA-RAP 483
S P + P PTR++PS K P R++P+ +AP
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRAPSPKAP 276
>U53337-4|AAA96186.2| 636|Caenorhabditis elegans Hypothetical
protein R02E12.2a protein.
Length = 636
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +1
Query: 388 KKSPNQRTPTRKSPS-RKTPTNFSARKSPA--RAPKEVKPTAEEHQ 516
KKS N TPTRK S K N S ++P+ ++PK +K +E++
Sbjct: 161 KKSGNASTPTRKLASEEKKAKNTSMGQTPSKLKSPKALKMVKKENE 206
>Z50756-4|CAA90639.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPA-RAPKEVKPTAEEH-QKWFG 528
S H A S +Q TPT+ +PS+ TP + S ++P V P+ ++ ++ FG
Sbjct: 88 SQTHQA--SVSQTTPTQTTPSQYTPASVSTARAPQFHRSSHVTPSQQQRIEQAFG 140
>Z50741-5|CAA90612.1| 482|Caenorhabditis elegans Hypothetical
protein T08D10.1 protein.
Length = 482
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPA-RAPKEVKPTAEEH-QKWFG 528
S H A S +Q TPT+ +PS+ TP + S ++P V P+ ++ ++ FG
Sbjct: 88 SQTHQA--SVSQTTPTQTTPSQYTPASVSTARAPQFHRSSHVTPSQQQRIEQAFG 140
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 367 VSPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTAEEHQK 519
VSP KK P + +P KSP + +P A K + ++++K
Sbjct: 676 VSPKKFEKKPPVKSSPVNKSPVKSSPIKKEAEKKKGPVASIFSSSTKKNEK 726
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPT----NFSARKSPARAPKEVKPTAEEHQ 516
+P PA SP+ +P+ SPS +P+ ++ + PA V P A+ Q
Sbjct: 356 APQEPAHPSPSYPSPSYPSPSYPSPSYPSPSYPSPSYPAEPAYSVPPPAKPEQ 408
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPT 501
SP ++SP +R +S SR P +SP R + PT
Sbjct: 561 SPIRSPRRSPLRRDNRDRSRSRSPPRRRRRSRSPRRREEHTDPT 604
>AF077542-6|AAC26298.1| 108|Caenorhabditis elegans Hypothetical
protein Y57G7A.3a protein.
Length = 108
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 379 HPAKKSPNQRTPTRKSPSRKTPTNFSARKS 468
+P KKS Q PT ++P KTP S ++
Sbjct: 52 NPIKKSSTQTCPTAQTPPAKTPIERSRHEA 81
>AF026215-1|AAB71319.1| 352|Caenorhabditis elegans Serpentine
receptor, class h protein83 protein.
Length = 352
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -3
Query: 549 LGVLKVIAEPLLVLLSCRLYLFRSTSRRFASRK 451
+GVL IA+ + L C YLF S R FAS+K
Sbjct: 210 IGVLTEIAQIVFFLACCVYYLFVSV-RSFASKK 241
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 370 SPAHPAKKSPNQRTPTRKSPSRKTPTNFSARKSPARAPKEVKPTA 504
+P P + + TPT + + TPT S KS P +K ++
Sbjct: 409 TPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMKSSPTTPTTMKTSS 453
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,815,750
Number of Sequences: 27780
Number of extensions: 297539
Number of successful extensions: 1285
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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