Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021177
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110485-15|CAB60363.2| 671|Caenorhabditis elegans Hypothetical... 63 2e-10
AJ414404-1|CAC92449.1| 671|Caenorhabditis elegans dihydroxyacet... 63 2e-10
U64847-8|AAQ91904.1| 558|Caenorhabditis elegans Acyltransferase... 41 8e-04
U64847-7|AAB04876.1| 718|Caenorhabditis elegans Acyltransferase... 41 8e-04
U64598-14|AAL65780.1| 190|Caenorhabditis elegans Paf-acetylhydr... 34 0.13
U64598-13|AAL65779.1| 388|Caenorhabditis elegans Paf-acetylhydr... 34 0.13
AF386745-1|AAL57290.1| 388|Caenorhabditis elegans PAF-2 protein. 34 0.13
X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin pr... 29 2.8
AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin ... 29 2.8
AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin ... 29 2.8
U41535-5|AAK67252.1| 548|Caenorhabditis elegans Lin-26 related ... 29 3.6
AJ130959-1|CAA10263.1| 548|Caenorhabditis elegans LIR-2A protei... 29 3.6
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 28 8.4
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 28 8.4
>AL110485-15|CAB60363.2| 671|Caenorhabditis elegans Hypothetical
protein Y46G5A.21 protein.
Length = 671
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +1
Query: 580 KKSVLFLPTHRSYADFCLMTYLCCHYDIDFPAVAAGMDFYSMAIVGRRMRETGRF 744
K V+F+P+H++Y DF L++ +C YDI PA+AAG DF SM + +R +G F
Sbjct: 139 KDCVIFMPSHKTYFDFLLLSLICFQYDIQLPAIAAGQDFMSMKFMAGVLRRSGAF 193
>AJ414404-1|CAC92449.1| 671|Caenorhabditis elegans dihydroxyacetone
phosphate acyltransferaseprotein.
Length = 671
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +1
Query: 580 KKSVLFLPTHRSYADFCLMTYLCCHYDIDFPAVAAGMDFYSMAIVGRRMRETGRF 744
K V+F+P+H++Y DF L++ +C YDI PA+AAG DF SM + +R +G F
Sbjct: 139 KDCVIFMPSHKTYFDFLLLSLICFQYDIQLPAIAAGQDFMSMKFMAGVLRRSGAF 193
>U64847-8|AAQ91904.1| 558|Caenorhabditis elegans
Acyltransferase-like protein 6,isoform b protein.
Length = 558
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/52 (34%), Positives = 34/52 (65%)
Frame = +1
Query: 589 VLFLPTHRSYADFCLMTYLCCHYDIDFPAVAAGMDFYSMAIVGRRMRETGRF 744
+++LP HRS+ D+ L+T+ H+ + P +A+G D +++ +G +R TG F
Sbjct: 1 MVYLPLHRSHLDYLLITWCNWHFGLKLPHIASG-DNLNLSGLGWLLRATGAF 51
>U64847-7|AAB04876.1| 718|Caenorhabditis elegans
Acyltransferase-like protein 6,isoform a protein.
Length = 718
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/52 (34%), Positives = 34/52 (65%)
Frame = +1
Query: 589 VLFLPTHRSYADFCLMTYLCCHYDIDFPAVAAGMDFYSMAIVGRRMRETGRF 744
+++LP HRS+ D+ L+T+ H+ + P +A+G D +++ +G +R TG F
Sbjct: 161 MVYLPLHRSHLDYLLITWCNWHFGLKLPHIASG-DNLNLSGLGWLLRATGAF 211
>U64598-14|AAL65780.1| 190|Caenorhabditis elegans
Paf-acetylhydrolase protein 2,isoform b protein.
Length = 190
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 717 PHNGH*VKIHSGSNSRKVNIVMTTQIGHKTKVCITAMCWKKQHGFLPIVNFSWSTFGSLT 538
P H + + G +S+K+N++ +T +G K + CI + PIV FS GS T
Sbjct: 63 PQYAHGLGEYLGQSSQKMNVITSTVVGEKREDCIENAQMSTKCDKWPIVVFSHGLGGSRT 122
>U64598-13|AAL65779.1| 388|Caenorhabditis elegans
Paf-acetylhydrolase protein 2,isoform a protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 717 PHNGH*VKIHSGSNSRKVNIVMTTQIGHKTKVCITAMCWKKQHGFLPIVNFSWSTFGSLT 538
P H + + G +S+K+N++ +T +G K + CI + PIV FS GS T
Sbjct: 63 PQYAHGLGEYLGQSSQKMNVITSTVVGEKREDCIENAQMSTKCDKWPIVVFSHGLGGSRT 122
>AF386745-1|AAL57290.1| 388|Caenorhabditis elegans PAF-2 protein.
Length = 388
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 717 PHNGH*VKIHSGSNSRKVNIVMTTQIGHKTKVCITAMCWKKQHGFLPIVNFSWSTFGSLT 538
P H + + G +S+K+N++ +T +G K + CI + PIV FS GS T
Sbjct: 63 PQYAHGLGEYLGQSSQKMNVITSTVVGEKREDCIENAQMSTKCDKWPIVVFSHGLGGSRT 122
>X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin
protein.
Length = 1651
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +3
Query: 309 LDKIYSPEDLKDFVAKSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEMGLDKKLHVIRW 488
+ KI ++ K+ K VY +N I+ T G+ ++ E + Y E ++KK + I W
Sbjct: 1385 MKKINEKKEWKN--VKVVYGENEIEMYKTEEGLI-CRVNGEEIEYQPESEIEKKQYNIIW 1441
Query: 489 MGVFFLKFHS 518
+ LKF S
Sbjct: 1442 LNKNTLKFDS 1451
>AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 6, isoform
a protein.
Length = 1650
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +3
Query: 309 LDKIYSPEDLKDFVAKSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEMGLDKKLHVIRW 488
+ KI ++ K+ K VY +N I+ T G+ ++ E + Y E ++KK + I W
Sbjct: 1385 MKKINEKKEWKN--VKVVYGENEIEMYKTEEGLI-CRVNGEEIEYQPESEIEKKQYNIIW 1441
Query: 489 MGVFFLKFHS 518
+ LKF S
Sbjct: 1442 LNKNTLKFDS 1451
>AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 6, isoform
c protein.
Length = 1651
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +3
Query: 309 LDKIYSPEDLKDFVAKSVYLDNFIDAESTRTGVSKTELHKEVLNYLEEMGLDKKLHVIRW 488
+ KI ++ K+ K VY +N I+ T G+ ++ E + Y E ++KK + I W
Sbjct: 1385 MKKINEKKEWKN--VKVVYGENEIEMYKTEEGLI-CRVNGEEIEYQPESEIEKKQYNIIW 1441
Query: 489 MGVFFLKFHS 518
+ LKF S
Sbjct: 1442 LNKNTLKFDS 1451
>U41535-5|AAK67252.1| 548|Caenorhabditis elegans Lin-26 related
protein 2, isoform a protein.
Length = 548
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 703 LSKNPFRQQQQESQYRNDNTDRS*DKSLHNCDVLEETTRISSH 575
L KN +R+ E+ RN++ R DK D+ E R+ SH
Sbjct: 31 LIKNSYRRLTTENVARNEHWARIADKVTEKFDIPAEMERVKSH 73
>AJ130959-1|CAA10263.1| 548|Caenorhabditis elegans LIR-2A protein
protein.
Length = 548
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 703 LSKNPFRQQQQESQYRNDNTDRS*DKSLHNCDVLEETTRISSH 575
L KN +R+ E+ RN++ R DK D+ E R+ SH
Sbjct: 31 LIKNSYRRLTTENVARNEHWARIADKVTEKFDIPAEMERVKSH 73
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 282 YESCSEMCRISPSRL*DINEIHFLTHFEFSTLLTNLIHRVDT 157
Y+ S C L +NEIHFL H+ L+ H + T
Sbjct: 3744 YQRLSTACSHIYHTLQQLNEIHFLYHYSLDFLVEIFTHVLKT 3785
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 282 YESCSEMCRISPSRL*DINEIHFLTHFEFSTLLTNLIHRVDT 157
Y+ S C L +NEIHFL H+ L+ H + T
Sbjct: 3744 YQRLSTACSHIYHTLQQLNEIHFLYHYSLDFLVEIFTHVLKT 3785
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,405,242
Number of Sequences: 27780
Number of extensions: 328122
Number of successful extensions: 772
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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