Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021177
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.5  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 613 CDVLEETTRISSHCQF*LEHFWFI 542
           CDVL  T  I + C   L+ +W I
Sbjct: 115 CDVLCCTASILNLCAIALDRYWAI 138


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 613 CDVLEETTRISSHCQF*LEHFWFI 542
           CDVL  T  I + C   L+ +W I
Sbjct: 115 CDVLCCTASILNLCAIALDRYWAI 138


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 613 CDVLEETTRISSHCQF*LEHFWFI 542
           CDVL  T  I + C   L+ +W I
Sbjct: 115 CDVLCCTASILNLCAIALDRYWAI 138


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 718  APQWPLSKNPFRQQQQESQ 662
            APQ P  +   +QQQQ+ Q
Sbjct: 1446 APQQPQQQQQQQQQQQQQQ 1464


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +1

Query: 553 SAPAKIDNGKKSVLFLPTHRSYADFCLMTYLCCHYDIDFPAVA 681
           S P ++   +   LF+P HR  A   +  ++      DF +VA
Sbjct: 71  SIPMQLGRRQPFSLFIPAHRKIAARLIDIFMGMRTYEDFLSVA 113


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,915
Number of Sequences: 438
Number of extensions: 3843
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)