Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021176
(743 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 42 5e-04
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 38 0.008
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 36 0.045
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 35 0.078
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 33 0.18
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 33 0.24
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 33 0.32
06_01_0254 + 1898586-1899617 32 0.55
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 31 0.97
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 30 1.7
06_03_1000 - 26778993-26779478 30 1.7
05_03_0472 - 14464320-14464428,14464468-14464500,14464889-144655... 30 1.7
03_01_0175 - 1413599-1413934,1414326-1414526,1414660-1414962 30 1.7
01_03_0012 + 11638363-11638476,11638854-11640678,11641855-116420... 30 1.7
06_03_0930 - 26038341-26038508,26039114-26039254,26040799-260408... 30 2.2
08_02_0193 - 14073103-14073246,14073332-14073481,14073571-140736... 29 2.9
01_01_1164 + 9263990-9264409,9264498-9264603,9264825-9264877,926... 29 2.9
09_06_0137 - 21080263-21081894 29 5.2
08_02_1004 - 23461798-23462024,23462340-23462415,23463479-234636... 29 5.2
07_03_1102 - 23981362-23982219 29 5.2
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294... 29 5.2
01_01_1063 - 8386813-8387236,8387322-8387779 29 5.2
08_02_0108 - 12615091-12615789,12616131-12616311,12616717-12616790 28 6.8
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 28 6.8
07_01_1037 - 9026198-9026586,9026773-9026937,9027010-9027096,902... 28 6.8
12_01_0274 - 1997016-1997357 28 9.0
11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565... 28 9.0
10_08_0095 + 14760292-14760624,14760689-14761000,14761768-147624... 28 9.0
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 9.0
07_03_1666 + 28482262-28482385,28482475-28482992 28 9.0
07_03_0588 - 19715677-19715754,19715843-19715942,19716170-197162... 28 9.0
06_03_1427 - 30090464-30090475,30090476-30090553,30090903-300913... 28 9.0
06_03_1422 + 30058936-30058975,30059057-30059233,30060848-300610... 28 9.0
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 28 9.0
02_04_0311 + 21936812-21937861 28 9.0
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 41.9 bits (94), Expect = 5e-04
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 56 QICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGE 172
++CAGC I + L +D +WH C +C CD + E
Sbjct: 176 RVCAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISE 214
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 37.9 bits (84), Expect = 0.008
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGE 172
CAGC I L +D +WH C +C C+ + E
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISE 293
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 35.5 bits (78), Expect = 0.045
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 56 QICAGCSKVITERYLLKALDQLWHEDCLKCGCC 154
++C GC I + L L WH C +C C
Sbjct: 112 RVCGGCKHEIGHGHYLSCLGMYWHPQCFRCSSC 144
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 34.7 bits (76), Expect = 0.078
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCD 157
CAGC I L + +WH +C +C C+
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACN 589
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRLFG 241
C C K + LL A +H+ C KC C L ++ + ++ CK + +LF
Sbjct: 10 CKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYS--SMDGVLYCKTHFEQLFK 67
Query: 242 NTG 250
TG
Sbjct: 68 ETG 70
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRLFG 241
CA C K + L + +H+ C KC C L + ++ CK + +LF
Sbjct: 106 CAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN--GILYCKIHFSQLFK 163
Query: 242 NTG 250
G
Sbjct: 164 EKG 166
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRLFG 241
CA CSK + Q +H+ C KC C + + ++ CK + +LF
Sbjct: 108 CATCSKTAYPLEKVTVEGQAYHKSCFKCSHGGCAISPSNYA--ALEGILYCKHHFSQLFK 165
Query: 242 NTGYLPLVIK 271
G +IK
Sbjct: 166 EKGSYNHLIK 175
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +2
Query: 56 QICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRL 235
Q C C+K + L ++H C KC C L ++ + + CK + +L
Sbjct: 7 QKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYS--SIEGVPYCKPHFEQL 64
Query: 236 FGNTG 250
F TG
Sbjct: 65 FKETG 69
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRLFG 241
C C K + LL A +H+ C KC C L ++ + ++ CK + +LF
Sbjct: 10 CTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYS--SMDGVLYCKTHFEQLFK 67
Query: 242 NTG 250
TG
Sbjct: 68 ETG 70
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/63 (25%), Positives = 25/63 (39%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRLFG 241
CA C K + L + +H+ C KC C L + ++ CK + +LF
Sbjct: 105 CAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALN--GVLYCKIHFGQLFM 162
Query: 242 NTG 250
G
Sbjct: 163 EKG 165
>06_01_0254 + 1898586-1899617
Length = 343
Score = 31.9 bits (69), Expect = 0.55
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +3
Query: 435 RKHGVQSTTAGTSQATDYAFASTSESGAMGGLMNGSGRSGSVCCPPAPQAPGPLGDQLRL 614
R++ +T+ G D A ST GG +G G G + PP Q P P Q L
Sbjct: 40 RRNRCWATSHGWVLCCDPATLSTFLWNPTGGDDDGGGGGGKIALPPFTQPPPPPNSQCAL 99
Query: 615 PR 620
R
Sbjct: 100 SR 101
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/70 (20%), Positives = 28/70 (40%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRLFG 241
C C K + + + +H C KC C L + + ++ C+ + +LF
Sbjct: 104 CTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHN--GILYCQNHFWQLFK 161
Query: 242 NTGYLPLVIK 271
+G ++K
Sbjct: 162 KSGSYDNLLK 171
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/63 (20%), Positives = 27/63 (42%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRLFG 241
C GC+K + + + ++H+ C KC C + + + + CK +++L
Sbjct: 110 CVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAH--EGKLYCKHHHIQLIK 167
Query: 242 NTG 250
G
Sbjct: 168 EKG 170
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 259 ACNKVIPAFEMVMRARSNVYHLECFACQQC 348
AC+K + + + A + VYH CF C C
Sbjct: 14 ACDKTVYLVDK-LTADNRVYHKACFRCHHC 42
>06_03_1000 - 26778993-26779478
Length = 161
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3
Query: 465 GTSQATDYAFASTSESGAMGGLMNGSGRSGSVCCPPAPQAPGPLGDQL 608
G S + A S G + GS + CPPAP+ P P G ++
Sbjct: 59 GASVSAAAAAVVESSDGCVTPTSAGSALRPATVCPPAPRKPRPAGKRM 106
>05_03_0472 -
14464320-14464428,14464468-14464500,14464889-14465572,
14465657-14465754,14465855-14465983,14466657-14466659
Length = 351
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/54 (24%), Positives = 24/54 (44%)
Frame = +1
Query: 244 YWILAACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILC 405
YW++ AC +IP+F V + Y+ A C + + +N ++C
Sbjct: 283 YWMVIACGALIPSFGRVFKRSLRWYYTGLLAKLLVKWTNCTSELILVDKNHLVC 336
>03_01_0175 - 1413599-1413934,1414326-1414526,1414660-1414962
Length = 279
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 496 PPPPRAVRWAAS*TGQVVPAPFAAPPHLKPLGL 594
PPP RA+R AAS P P APP P G+
Sbjct: 34 PPPRRALRVAASAAADAPPKP--APPPTSPSGI 64
>01_03_0012 +
11638363-11638476,11638854-11640678,11641855-11642096,
11642198-11642327,11642464-11642774
Length = 873
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 131 DCLKCGCCDCRLGEVGHTLYTRANL--ILCKRDYLRL 235
+C+ CCD G GH + NL I+C R+ L L
Sbjct: 456 ECVYESCCDLSQGNDGHVCFCNRNLYDIICTREKLPL 492
>06_03_0930 -
26038341-26038508,26039114-26039254,26040799-26040858,
26040972-26041034,26041444-26041454,26041722-26041802,
26042783-26043020,26043563-26043997
Length = 398
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +3
Query: 411 RLRREAGFRKHGVQSTTAGTSQATDYAFASTSESGAMGGLMNGSGRSGSVCCPPAPQAP 587
R R +G + A S A+ ++ S SG+ G G+ C PP P P
Sbjct: 67 RRRSPSGSGSAATKGRWARGSPASPLDYSGGSGSGSGSAASTSGGEDGAFCSPPPPPPP 125
>08_02_0193 -
14073103-14073246,14073332-14073481,14073571-14073640,
14073900-14074021,14074260-14074395,14074492-14074967
Length = 365
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 454 PPPLAHLKRQTTHLPPPPRAVRWAAS*TGQVVPAPFA 564
PPPL +R PPPPR + G ++PA F+
Sbjct: 54 PPPLCRRRRSWPPPPPPPRVSSSSYVGRGILLPATFS 90
>01_01_1164 +
9263990-9264409,9264498-9264603,9264825-9264877,
9265249-9265380,9266250-9266372
Length = 277
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 566 PPRTSSPWASRR-PAEITAYETRPTRMPSIKTEQSY*TKVSDPKTR 700
PP S RR PA A ETRPTR PS ++ ++D TR
Sbjct: 45 PPFRSRSCRRRRVPAPAAAAETRPTRSPSRARARARAKLLADADTR 90
>09_06_0137 - 21080263-21081894
Length = 543
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 540 SGRSGSVCCPPAPQAPGPLGDQLRLPRMRRGPPV 641
S SG + PP+PQ PLG RL +RRG P+
Sbjct: 93 SALSGLLASPPSPQL--PLGLLRRLLALRRGVPL 124
>08_02_1004 -
23461798-23462024,23462340-23462415,23463479-23463610,
23463927-23464004,23464919-23465320
Length = 304
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 487 THLPPPPRAVRWAAS*TGQVVPAPFAAPPHLKPLG-LSATS*DYRV*DAAHPYA 645
T LPPPPRA A+ ++P P A L P G +A + R D HP A
Sbjct: 3 TCLPPPPRAA--IAAVLTSLLPPPPGASASLAPAGPAAAVARQIRRNDGHHPGA 54
>07_03_1102 - 23981362-23982219
Length = 285
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 475 KRQTTHLPPPPRAVRWAAS*TGQVVPAPFAAPP 573
+R T PPPP A W G VV AP PP
Sbjct: 157 RRSTGSAPPPPPATAWGIFRLG-VVGAPDVYPP 188
>03_05_0843 +
28126480-28127007,28127092-28127457,28129388-28129487,
28130266-28130546,28130643-28130705,28131276-28131431,
28131913-28132080,28132158-28132298,28132714-28132840,
28132888-28132994,28134142-28134372,28134446-28134559,
28135091-28135261
Length = 850
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 454 PPPLAHLKRQTTHLPPPPRAVRWAA 528
PPPL ++ PP RA+RWAA
Sbjct: 41 PPPLPPPPPRSNSAPPERRALRWAA 65
>01_01_1063 - 8386813-8387236,8387322-8387779
Length = 293
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 454 PPPLAHLKRQTTHLPPPPRAVRWAAS*TGQVVPAPFAAPP 573
PPP+ + H PPPP A A S ++ PA P
Sbjct: 241 PPPMPYGPHPHPHQPPPPAAAATAPS-APEITPAACQVQP 279
>08_02_0108 - 12615091-12615789,12616131-12616311,12616717-12616790
Length = 317
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 530 HERVRSFRLRLLPPRTSSPWASRRPAE 610
H+R R +RLRLLPPR W S RP +
Sbjct: 9 HQR-RYYRLRLLPPR----WGSLRPQQ 30
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +1
Query: 421 ERLVFANMAYNPPPLAHLKRQTTHLPPPPRAVRWAAS*TGQVVPAPFAAPPHLKPL 588
+RL+ A +PPP A + T P P +G P PPHLKPL
Sbjct: 233 QRLLRPLPAESPPPAALANLELTGSPVKPAVEDRGGENSGAARPPK---PPHLKPL 285
>07_01_1037 -
9026198-9026586,9026773-9026937,9027010-9027096,
9027173-9027245,9027947-9028012,9028096-9028194,
9028710-9028772,9028959-9029345
Length = 442
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 453 STTAGTSQATDYAFASTSESGAMGGLMNGSGRSGSVCCPPAPQAPGPLGDQLR-LPRMRR 629
+ AG + D A+A + G L G S S PP P P P + R R
Sbjct: 10 AAAAGEEEEEDAAWADALDFDDSGFLRRGPASSPSRLRPPRPDDPAPAASLSQGAARGLR 69
Query: 630 GPP 638
PP
Sbjct: 70 SPP 72
>12_01_0274 - 1997016-1997357
Length = 113
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -1
Query: 263 QAASIQYCRITSNNLSCRELGWRACIECGQPPRVGSRSSR 144
QAA T L+ GW+ +ECG P VG R
Sbjct: 49 QAAPTTLLLATVAELAATADGWKRGVECGSAPVVGGGGGR 88
>11_01_0687 -
5651002-5651453,5651535-5651951,5652621-5653338,
5654106-5654417,5654482-5654814
Length = 743
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 435 RKHG--VQSTTAGTSQATDYAFASTSESGAMGGLMNGSGRSGS 557
RK G + +TA QA AFA+ + G + L +G+G S S
Sbjct: 8 RKRGEDIHPSTAAKGQAVPLAFAAPAPHGLLINLDSGTGSSAS 50
>10_08_0095 +
14760292-14760624,14760689-14761000,14761768-14762489,
14762905-14763187,14763419-14763650,14763736-14764187
Length = 777
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 435 RKHG--VQSTTAGTSQATDYAFASTSESGAMGGLMNGSGRSGS 557
RK G + +TA QA AFA+ + G + L +G+G S S
Sbjct: 8 RKRGEDIHPSTAAKGQAVPLAFAAPAPHGLLINLDSGTGSSAS 50
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 496 PPPPRAVRWAAS*TGQVVPAPFAAPPHLKPLG 591
PPPP+ + Q P PF APP P G
Sbjct: 30 PPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPG 61
>07_03_1666 + 28482262-28482385,28482475-28482992
Length = 213
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 444 GVQSTTAGTSQATDYAFASTSESGAMGGLMNGSGRSGSVCCPPA 575
G Q S+ + + S MG LM+GSGR + PPA
Sbjct: 62 GNQGFIRRNSKGQFVVLLNVTSSEMMGSLMSGSGRVAVITPPPA 105
>07_03_0588 -
19715677-19715754,19715843-19715942,19716170-19716297,
19716385-19716552,19716623-19716735,19716820-19716972,
19717082-19717225,19718710-19719427
Length = 533
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 496 PPPPRAVRWAAS*TGQVVPAPFAAPPHLKP 585
PPPP VR+ S V P APP P
Sbjct: 41 PPPPAEVRYTPSAMNPPVVPPVVAPPKPTP 70
>06_03_1427 -
30090464-30090475,30090476-30090553,30090903-30091304,
30091372-30091446,30091536-30091691,30091821-30092012,
30093735-30093908,30094966-30095123,30096738-30096914,
30096996-30097035
Length = 487
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 522 GGLMNGSGRSGSVCCPPAPQAPGPLGDQLRLP 617
GG N + RSG+VC P+ A G LR+P
Sbjct: 145 GGYKNTAMRSGAVCGGPSMPADGDGSLHLRIP 176
>06_03_1422 +
30058936-30058975,30059057-30059233,30060848-30061005,
30062063-30062236,30063959-30064150,30064280-30064435,
30064525-30064599,30064667-30065068,30065418-30065495,
30065840-30066173,30066275-30066339
Length = 616
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 522 GGLMNGSGRSGSVCCPPAPQAPGPLGDQLRLP 617
GG N + RSG+VC P+ A G LR+P
Sbjct: 145 GGYKNTAMRSGAVCGGPSMPADGDGSLHLRIP 176
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 496 PPPPRAVRWAAS*TGQVVPAPFAAPPHLKPLGLSATS*DYRV*DAAHPY 642
PPPP + ++ ++ + P+P AAP +P T+ R DAA P+
Sbjct: 640 PPPPASHQFRSAAAFRRPPSPAAAPLRARPQRGGGTT--IRAIDAAQPF 686
>02_04_0311 + 21936812-21937861
Length = 349
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 555 SVCCPPAPQAPGPLGDQLRLPRMR-RGPPVCQVSKLNSRTKLK*AT 689
S+C PAP+APGP GD R R PP + L SR +L+ AT
Sbjct: 248 SLCALPAPRAPGP-GDGGDHERFTVRLPPHVREEVLKSR-RLRHAT 291
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,441,185
Number of Sequences: 37544
Number of extensions: 564191
Number of successful extensions: 2531
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2511
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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