Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021176
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 102 3e-22
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 69 4e-12
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 65 5e-11
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 65 5e-11
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 64 2e-10
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 60 1e-09
SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16) 54 2e-07
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 44 2e-04
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 39 0.004
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 36 0.026
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 36 0.035
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 35 0.061
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 34 0.11
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 32 0.43
SB_11781| Best HMM Match : zf-C3HC4 (HMM E-Value=6.6e-16) 31 0.75
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.0
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_16643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 29 4.0
SB_23087| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_5842| Best HMM Match : WD40 (HMM E-Value=6.7e-21) 29 5.3
SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16) 29 5.3
SB_34801| Best HMM Match : Vicilin_N (HMM E-Value=0.3) 28 7.0
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 28 7.0
SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21) 28 7.0
SB_12625| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 7.0
SB_4151| Best HMM Match : DUF1035 (HMM E-Value=6) 28 9.2
SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30) 28 9.2
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 102 bits (245), Expect = 3e-22
Identities = 40/69 (57%), Positives = 55/69 (79%)
Frame = +2
Query: 44 PPQPQICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRD 223
P + ++C C++ I+++Y+L+AL WHE CLKC CCD RLG++G +LY++ANLILCKRD
Sbjct: 11 PVERRLCRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILCKRD 70
Query: 224 YLRLFGNTG 250
YLRLFG G
Sbjct: 71 YLRLFGIPG 79
Score = 74.1 bits (174), Expect = 1e-13
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +1
Query: 250 ILAACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILC 405
+ + CNK I AFE+VMRAR+N YH+ECF CQ+C R VG+ F +NK+LC
Sbjct: 80 VCSHCNKPIAAFELVMRARNNAYHIECFGCQRCRKRLVVGEAFCFHDNKVLC 131
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +2
Query: 50 QPQICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYL 229
Q +CAGC I ER+ L A+DQ WH DCLKC C+ RL + T +++ +ILC+ DY
Sbjct: 244 QQAVCAGCGSRILERFYLMAVDQEWHADCLKCSDCELRL-DNELTCFSKDGVILCREDYY 302
Query: 230 RLF 238
R F
Sbjct: 303 RRF 305
Score = 61.3 bits (142), Expect = 8e-10
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +1
Query: 256 AACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYEERL 429
++C++ I + E+VMRAR VYH+ CFAC +C G+ F + +I C+ DYEE L
Sbjct: 311 SSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCKEDYEELL 368
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 65.3 bits (152), Expect = 5e-11
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +1
Query: 256 AACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDY 417
+ C K IPA E+VMRA NVYHL CF C C H G F L +NK+ C+ D+
Sbjct: 8 SGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCKADF 61
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 65.3 bits (152), Expect = 5e-11
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +1
Query: 256 AACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDY 417
+ C K IPA E+VMRA NVYHL CF C C H G F L +NK+ C+ D+
Sbjct: 106 SGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCKADF 159
Score = 62.1 bits (144), Expect = 5e-10
Identities = 23/61 (37%), Positives = 41/61 (67%)
Frame = +2
Query: 59 ICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRLF 238
IC GC++ I +R+L+K +D+ WHE CL+ CC CR ++ + +++ + C+ DY ++F
Sbjct: 45 ICTGCNEPIEDRFLMKVVDEAWHESCLQ--CCICR-SQLSRSCFSKDRKLYCRTDYEKVF 101
Query: 239 G 241
G
Sbjct: 102 G 102
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 63.7 bits (148), Expect = 2e-10
Identities = 29/64 (45%), Positives = 34/64 (53%)
Frame = +2
Query: 50 QPQICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYL 229
Q + C GC I +RYL+K + WH CLKC C LG T YT+ I CK DY
Sbjct: 98 QGERCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREA-TCYTKDGKIYCKADYA 156
Query: 230 RLFG 241
R FG
Sbjct: 157 RQFG 160
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +1
Query: 256 AACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYEERL 429
A C + I A + V RA++ VYHL CFAC C + G+ F L + +LC+ Y E L
Sbjct: 164 ARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLCKLHYLEAL 221
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 63.3 bits (147), Expect = 2e-10
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +1
Query: 256 AACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYD 414
A C K+IPA E+VM+ VYHL CF C C+++ GDRF++ ++ CE D
Sbjct: 709 AVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDRFHVVNGRLFCEND 761
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +2
Query: 56 QICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRL 235
Q CAGC I +++LLK LD +WH C++C C C L E ++R + CK D+ R
Sbjct: 3 QQCAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTE---RCFSREGKLFCKTDFYRR 59
Query: 236 FG 241
+G
Sbjct: 60 YG 61
Score = 47.6 bits (108), Expect = 1e-05
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 AACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDR-FYLCENKILCEYDY 417
+ C++ I +MV RA+ V+H++CF C C + GD +Y+ + +C DY
Sbjct: 65 SGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQITTGDELYYIGDGSFICRDDY 119
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQL-WHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDY 226
C+GC + I+ +++ L +H DC C C ++ Y +C+ DY
Sbjct: 64 CSGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQITTGDELYYIGDGSFICRDDY 119
>SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16)
Length = 339
Score = 53.6 bits (123), Expect = 2e-07
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 256 AACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYE 420
A C+ + VMRAR+ +YH++CF C C+ + GD F L E+ + C+ D+E
Sbjct: 85 AKCSLNFSKNDFVMRARNKIYHIDCFRCVACSRQLVPGDEFALREDGLFCKADHE 139
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 62 CAGCSKVITER-YLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDY 226
CA CS ++ ++++A ++++H DC +C C +L G R + + CK D+
Sbjct: 84 CAKCSLNFSKNDFVMRARNKIYHIDCFRCVACSRQL-VPGDEFALREDGLFCKADH 138
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRLFG 241
C CSK + + A+ + WH+ CL C CC+ L L + I CK Y + FG
Sbjct: 10 CPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDST--NLADKDGEIYCKGCYGKNFG 67
Query: 242 NTGY 253
GY
Sbjct: 68 PKGY 71
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +2
Query: 47 PQPQICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDY 226
P CAGC + I L AL++ WH C C C C L + + C++DY
Sbjct: 84 PYLHTCAGCGEAIKGSQALLALEKQWHLWCFSCTKCHCLLSLEYMGMDGKP---YCEKDY 140
Query: 227 LRLFGNT 247
LFG T
Sbjct: 141 QELFGVT 147
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 256 AACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYL-CENKILCEYDYEE 423
A C + I + ++ A +HL CF+C +C+ C+ Y+ + K CE DY+E
Sbjct: 90 AGCGEAIKGSQALL-ALEKQWHLWCFSCTKCH---CLLSLEYMGMDGKPYCEKDYQE 142
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = +1
Query: 316 YHLECFACQQCNHRFCVGDRFYLCENKILCE 408
+H CFAC C F D+ LC+
Sbjct: 38 FHEACFACNSCRQPFPPSDKIIFTGTDYLCQ 68
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +2
Query: 44 PPQPQICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRD 223
P CA C + + A+ + +H C +C C+ RL Y R + + CK+D
Sbjct: 5 PSSINYCATCGEPCIKTEYKYAIGKRFHNACFRCVVCEERLST---DFYARGSELYCKKD 61
Query: 224 YLRLFGNTGYL 256
YL F + ++
Sbjct: 62 YLSKFNSVCHI 72
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRLFG 241
C C + + +R ++ AL + WH + C C+ GH Y R L C+ Y L+G
Sbjct: 81 CFCCGRPVEDR-VVHALGKAWHVEHFVCAKCEKPF--YGHRYYERKGLAYCETHYNELYG 137
Query: 242 N 244
+
Sbjct: 138 D 138
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 277 PAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYEE 423
P + V+ A +H+E F C +C F G R+Y + CE Y E
Sbjct: 87 PVEDRVVHALGKAWHVEHFVCAKCEKPF-YGHRYYERKGLAYCETHYNE 134
Score = 31.1 bits (67), Expect = 0.99
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 98 LLKALDQLWHEDCLKCGCCDCRLGEVG 178
++KA+ WH DC +C C+ L + G
Sbjct: 25 VIKAMQANWHPDCFRCEICNDCLADTG 51
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +1
Query: 250 ILAACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYEER 426
+ CN+VI V A S YH ECF C C+ + G F E + +C+ Y ER
Sbjct: 236 VCVKCNQVIKT-SSVQHAGST-YHSECFTCHHCD-KPLAGSPFTKQEGRNVCQNCYRER 291
Score = 31.5 bits (68), Expect = 0.75
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 259 ACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILC 405
AC+ +I + +H ECF C +CN + G++F + + + +C
Sbjct: 298 ACHNLIEGNTKFVAYDEKYFHRECFTCCKCN-KPLAGEKFRIRDGEKIC 345
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Frame = +1
Query: 250 ILAACNKVIPAFEMVMRARSNVYHLECFACQQC-----NHRFCVGDRFYLCEN 393
+ AACN E + +S +H +CF C +C + +F D LC N
Sbjct: 175 VCAACNGDFAPGEKKVGYQSKTFHDKCFICDECKQPIGSKQFIRRDERRLCNN 227
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 35.9 bits (79), Expect = 0.035
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTLYTRANLILCKRDYLRLF 238
CA C+ I + + ALDQ WH + C C G+ G + R C+ DY +F
Sbjct: 341 CAYCNGPILDS-CVTALDQTWHPEHFVCAECGNPFGDTG--FHERDGKPFCREDYYAMF 396
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 35.1 bits (77), Expect = 0.061
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHTL 187
CA C ++I +A D WH C CDC LG + + +
Sbjct: 143 CAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVM 184
Score = 31.1 bits (67), Expect = 0.99
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 256 AACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYE 420
AAC+++I A E A + +H++ F C +C+ G R+ + +NK C + +E
Sbjct: 144 AACDEIIFA-EQCTEAEDSCWHVQHFCCFECDCPL-GGMRYVMRDNKPYCCHCFE 196
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 62 CAGCSKVITERYLL--KALDQLWHEDCLKCGCCDCRLG 169
CA CS+ I + + L + WH+DC C C R G
Sbjct: 2031 CASCSQPIRKSMAVYVSELKRYWHDDCFSCVVCHVRFG 2068
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 32.3 bits (70), Expect = 0.43
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 53 PQICAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLGEVGHT 184
P C C K + KA + WH+ CL C C+ RL T
Sbjct: 2 PDKCPRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRLDSTNLT 45
>SB_11781| Best HMM Match : zf-C3HC4 (HMM E-Value=6.6e-16)
Length = 293
Score = 31.5 bits (68), Expect = 0.75
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 380 IYAKIRFSASTITKRGWFSQTWRTIHHRWHISSD 481
I ++R+ T+R +F Q WR ++ W IS++
Sbjct: 182 IVLRVRYFYQWFTRRSFFWQKWRRLNQEWFISTE 215
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 259 ACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYEER 426
AC + I + YH +CF C +C + G F E +C+ Y +R
Sbjct: 63 ACRQYIEGTVKFVTRDEGTYHSDCFVCSRC-RKPLAGKTFTEHEGSWVCDDCYHDR 117
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 250 ILAACNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILCE 408
I +C K I + V+R ++ +H ECF C C G F + +++ +C+
Sbjct: 1 ICNSCFKTITS--SVVRYQNKPHHSECFVCFHCRTPL-AGKTFQMRDDRKVCK 50
>SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 281 AGITLLQAASIQYCRITSNNL-SCRELGWRACIECGQPPRVGSRSSRTSNSPRAT 120
A + +L+ I Y R NNL S R + +PP + R SRTS PRA+
Sbjct: 71 AKLRVLRPNYILYRRKARNNLKSLRRNSGTSRSMSDRPPELPPRQSRTSTKPRAS 125
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +2
Query: 44 PP--QPQICAGCSKVITERYLLKALDQLWHED--CLKCGCCDCRLGEVGH 181
PP QPQ C C KV +LK Q HE KC C+ + GH
Sbjct: 254 PPAEQPQTCDICKKVYASARVLKVHVQTVHEGERPHKCKYCEATFTQRGH 303
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 501 TSESGAMGGL-MNG-SGRSGSVCCPPAPQAPGPLGDQLRLPRMRRGPP 638
T G GG+ NG SGR GS P P APG G PR +GPP
Sbjct: 27 TGPPGLAGGVGANGPSGRGGSQGPPGPPGAPGQPG-----PRGIKGPP 69
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 262 CNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILC 405
C + + E ++ R ++H CF C +CN G + E++ C
Sbjct: 614 CGERVYLMERLVAER-RLFHRACFRCSRCNSSLRAGTYTFFPESESFC 660
>SB_16643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 554
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -1
Query: 239 RITSNNLSCRELGWRACIECGQPPRVGSRSSRTSNSPRATVDPKPSRDT 93
+I S ++ G R I+ Q P+ GS+SS S++ +AT PK T
Sbjct: 491 KIVSEDVKSPRKG-RNVIKAFQSPKKGSKSSEESDNHKATNSPKKKSKT 538
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 543 GRSGSVCCPPAPQAPGPLGDQLRLPRMRRGPP 638
GRS ++ PP PQ P Q+ P +GPP
Sbjct: 3801 GRSKNISGPPGPQGPPGQASQIPGPPGPQGPP 3832
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 62 CAGCSKVITERYLLKALDQLWHEDCLKCGCCDCRLG 169
CA C ++I +A D+ WH+ C CD LG
Sbjct: 374 CAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLG 409
>SB_23087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 408 VRLRREAGFRKHGVQSTTAGTSQATDYAFASTSESGAMGGLMNGSG--RSGSV 560
+R R +A F+K+G T G + AT A TS ++ + G+G RSG +
Sbjct: 215 LRERIKAIFKKYGFTVTAIGLAVATTIATIVTSLGKSLSSVARGAGCRRSGEI 267
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 62 CAGCSKVITE-RYLLKALDQLWHEDCLKCGCCDCRLGEVG 178
C C ++I L+ WHE+C +C C +G G
Sbjct: 402 CFACGQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSG 441
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 262 CNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILC 405
C K I E SN +H ECF C +C R + F +++LC
Sbjct: 525 CLKAIVGGEYYTLEESN-FHKECFMCSRCG-RSLASEGFVREGDELLC 570
>SB_5842| Best HMM Match : WD40 (HMM E-Value=6.7e-21)
Length = 759
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 503 GGGKCVVCRLRCASGGG 453
GGG CV R+RC SGGG
Sbjct: 608 GGGTCVT-RIRCRSGGG 623
>SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16)
Length = 299
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = +1
Query: 367 GDRFYLCENKILCEYDYEERLVFANMAYNPPPLAHLKRQTTHLPPPPRAVRWAAS*TGQV 546
G+R + + +YD + Y P + + + ++ PPP A+ ++A QV
Sbjct: 146 GERSSMGYDSTSVDYDNPREYTEPSAGYQQQPSTYDQPSSGYMQPPPAALEYSAPSYNQV 205
Query: 547 VPAP 558
AP
Sbjct: 206 QSAP 209
>SB_34801| Best HMM Match : Vicilin_N (HMM E-Value=0.3)
Length = 451
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 457 PPLAHLKRQTTHLPPPPRAVR 519
PPL L+ + T LPPPP+ R
Sbjct: 371 PPLPRLRLRLTSLPPPPQPSR 391
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 262 CNKVIPAFEMVMRARSNVYHLECFACQQCNHRFCVGDRFYLCENKILC 405
C K I E SN +H ECF C +C R + F +++LC
Sbjct: 113 CLKAIVGGEYYTLEESN-FHKECFMCSRCG-RSLASEGFVREGDELLC 158
>SB_16139| Best HMM Match : rve (HMM E-Value=3.6e-21)
Length = 889
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +3
Query: 498 STSESGAMGGLMNGSGRSGSVCCPPAPQAPGPLGDQLRLPRMRRGPPVCQVSKLNSRTK 674
++S G G + GS CP AP P+ + P RR P S +N K
Sbjct: 303 ASSSLGGSGQITPSGTLQGSKPCPSGGVAPDPITYTVHKPYRRRYSPPTAYSSVNDGYK 361
>SB_12625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 474 QATDYAFASTSESGAMGGLMNGSGRSGSVCCPPAPQAPGPL-GDQLRL 614
QAT Y+FA + G + PP P PGP+ D+L L
Sbjct: 51 QATHYSFAVRPDGLDAGSVPEHVDERNRASAPPEPAQPGPVSADELIL 98
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 454 PPPLAHLKRQTTHLPPPPRAVRWAAS*TGQVVPAPFAAPP 573
PPP+A T PPPP + AA+ VP A+PP
Sbjct: 154 PPPIA----PATGGPPPPPPIAPAATVPAPAVPLAAASPP 189
>SB_4151| Best HMM Match : DUF1035 (HMM E-Value=6)
Length = 254
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 702 ALVFGSLTLV*YDCSVLIL--GIRVGRVSYAVISAGRREAQGLEVRGGSKRSRND 544
A V+ TL+ CS+L+L G+ V Y + RR LE GS+R +D
Sbjct: 67 AAVYSGKTLIALTCSILVLLIGVTFMLVGYLI---PRRSVVYLEKSNGSRRPTDD 118
>SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +1
Query: 448 YNPP-PLAHLKRQTTHLPPPPRAVRWAAS*TGQVVPAPFAAPPHLKP 585
Y PP P A T H PPP + + ++ G P + PP P
Sbjct: 137 YPPPGPQAPPPGSTVHYPPPQTTMGYPSAQPGFAPPGNYPPPPAPPP 183
>SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 259 ACNKVIPAFEMVMRARSNVYHLECFACQQCN 351
+C K + E V ++V+H CF C CN
Sbjct: 247 SCGKSVDILERVA-VENHVFHKACFVCAICN 276
>SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30)
Length = 3015
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Frame = -1
Query: 275 ITLLQAAS----IQYCRITSNNLSCRELGW--RACIECGQPPRVGSRS 150
IT++ A S +QY + + SC G R+CIE PP++G+R+
Sbjct: 1203 ITIIMACSYFIGLQYVKTSRTRRSCFGNGRQKRSCIEPKDPPQLGNRT 1250
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,770,172
Number of Sequences: 59808
Number of extensions: 597690
Number of successful extensions: 2693
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2683
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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