Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021175
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    51   1e-08
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   5.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.5  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 50.8 bits (116), Expect = 1e-08
 Identities = 25/71 (35%), Positives = 38/71 (53%)
 Frame = +2

Query: 494 NISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSH 673
           N+     +DLS N + +     F    +L +L+ S N + +IP   F  L NL ++D SH
Sbjct: 270 NMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSH 329

Query: 674 NRLRFIPFQVF 706
           NRLR +P  +F
Sbjct: 330 NRLRSLPDNLF 340



 Score = 38.7 bits (86), Expect = 5e-05
 Identities = 21/65 (32%), Positives = 32/65 (49%)
 Frame = +2

Query: 515 IDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIP 694
           I L  N I+      F     L  LN+  N++  I   TF +L  LE LDL++N +  + 
Sbjct: 121 IHLDDNRIESLERRAFMNLKSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSISSLD 180

Query: 695 FQVFE 709
           F +F+
Sbjct: 181 FNIFD 185



 Score = 37.9 bits (84), Expect = 8e-05
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +2

Query: 515 IDLSGNVIKKTGNGLFAQFG-RLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFI 691
           +DLS N I       F      L+ L +  N+L +  +  F ++ +L+VLDLSHN L  +
Sbjct: 228 LDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYEL 287

Query: 692 PFQVF 706
            F  F
Sbjct: 288 DFDTF 292



 Score = 37.5 bits (83), Expect = 1e-04
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
 Frame = +2

Query: 491 QNISKTSYIDLSGNVIKKTGNGLFAQFGRL--IYLNISRNELEDI---PRSTFAD----- 640
           QN+ +   +DL+ N I      +F Q G L   ++N+S N+L ++   P   F       
Sbjct: 161 QNLPELEDLDLAYNSISSLDFNIFDQVGSLGMFHVNMSHNKLINLVVAPSVPFEQDTGLG 220

Query: 641 -LENLEVLDLSHNRLRFIPFQVFEPM 715
            L+N++VLDLS N +  +  Q F P+
Sbjct: 221 GLQNIKVLDLSFNNITSVAKQFFRPV 246



 Score = 30.3 bits (65), Expect = 0.016
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 602 NELEDIPRSTFADLENLEVLDLSHNRLRFIPFQVF 706
           + +++ P      L  LE LDLS+NRLR +P   F
Sbjct: 28  SSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSF 62



 Score = 30.3 bits (65), Expect = 0.016
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +2

Query: 485 FVQNISKTSYIDLSGNVIKKTGNGLF-AQFGR-LIYLNISRNELEDIPRSTFADLENLEV 658
           F++++ K   + L  N I+    G F     R L  +  S N + ++ + TFADL  LE 
Sbjct: 64  FLRSLKK---VHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVRNVQQHTFADLIQLEQ 120

Query: 659 LDLSHNRLRFIPFQVF 706
           + L  NR+  +  + F
Sbjct: 121 IHLDDNRIESLERRAF 136



 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 509 SYIDLSGNVIKKTGNGLFAQFGRLIYLNISRN 604
           S++DLS N + +   G F    RL  LN+  N
Sbjct: 397 SWLDLSYNRLGQIDAGTFKGIPRLASLNLGHN 428


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 444 IIWTNSNINYLEIDLFKT 497
           I + NSN+NY +I + +T
Sbjct: 25  ISYKNSNVNYSKIGIVQT 42


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 488 VQNISKTSYIDLSGNVIKKTGNGLF 562
           V ++SK   + LSG+V+ K    LF
Sbjct: 381 VSSVSKPEALRLSGSVVTKVTCELF 405


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 635 ADLENLEVLDLSHNRLRFIPFQVFEP 712
           A + NL + DL HN   +   + F+P
Sbjct: 400 ASIVNLHIYDLHHNPAIYPDPEKFDP 425


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,035
Number of Sequences: 336
Number of extensions: 2873
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)