Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021175
(715 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 45 9e-06
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 40 3e-04
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 34 0.023
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 33 0.054
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 29 0.87
SPBC336.06c |rnh1||ribonuclease H Rnh1|Schizosaccharomyces pombe... 29 0.87
SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase Agn2|Schizo... 28 1.5
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 27 2.0
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.7
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 27 2.7
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 27 2.7
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 26 4.7
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 26 6.1
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy... 25 8.1
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 45.2 bits (102), Expect = 9e-06
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +2
Query: 521 LSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIP 694
L N IK G + +F RL YLNI N L + P S LE+LE+LD+S N+++ +P
Sbjct: 59 LGHNFIKSIGPEIL-KFTRLRYLNIRSNVLREFPES-LCRLESLEILDISRNKIKQLP 114
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 644 ENLEVLDLSHNRLRFIPFQVFE 709
EN LDLSH LR +P++ E
Sbjct: 27 ENALTLDLSHLNLRELPYEQLE 48
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +2
Query: 524 SGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPFQV 703
S ++++K + + +L+YL S +L+ IP++ F L++L LDLS N L IP+ +
Sbjct: 316 SSSLMEKDAILSSSSWSQLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYAL 375
Query: 704 FE 709
E
Sbjct: 376 GE 377
Score = 30.3 bits (65), Expect = 0.29
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 500 SKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNR 679
S+ Y+ S +K +F L+ L++S NEL +IP + +L L L+L+ N+
Sbjct: 332 SQLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYA-LGELPQLCSLNLASNK 390
Query: 680 L 682
+
Sbjct: 391 I 391
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 33.9 bits (74), Expect = 0.023
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 584 YLNISRNELEDIPRSTFADLENLEVLDLSHN 676
YL ++ +L+++P+ + NL VLDLSHN
Sbjct: 871 YLELANVQLKEVPKYIATSMPNLRVLDLSHN 901
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 587 LNISRNELEDIPRSTFADLENLEVLDLSHNRL 682
LN N L + ++F++L NL+ LD+S+N+L
Sbjct: 651 LNAVENRLSSL--TSFSNLLNLQYLDISYNQL 680
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 32.7 bits (71), Expect = 0.054
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +2
Query: 473 PRN*FVQNISKTSYIDLSGNVIKKTGNGLFAQFGR--LIYLNISRNELEDIPRSTFADLE 646
PR + + + +++S N I + +F+ R L LNI+ N+L +P ST L
Sbjct: 467 PRGKPITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHST-RYLV 525
Query: 647 NLEVLDLSHNRLRFIPFQVFE 709
NL LDLS+N P + E
Sbjct: 526 NLTYLDLSYNNFVTFPLIITE 546
Score = 27.5 bits (58), Expect = 2.0
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +2
Query: 515 IDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIP 694
+D+ +V++K F++ L+ISR+ LE IP + L L++SHN +P
Sbjct: 391 MDIGADVLRK-----FSEKKITANLDISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLP 445
Query: 695 FQVFE 709
E
Sbjct: 446 LDFME 450
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/65 (23%), Positives = 34/65 (52%)
Frame = +2
Query: 488 VQNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDL 667
+ +S+ ++ S N++ + + + +L +L + N+L + L+NLE +DL
Sbjct: 544 ITELSQLETLNFSHNLLSQISSKI-GSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDL 602
Query: 668 SHNRL 682
S+N +
Sbjct: 603 SYNAI 607
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 506 TSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHN 676
T+ +D+S + ++ ++ LI LN+S N D+P L+ LD+S+N
Sbjct: 407 TANLDISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDISNN 463
Score = 27.1 bits (57), Expect = 2.7
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 533 VIKKTGNGLFAQ---FGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRL 682
V + GN F F L LN+S N L +IP F + +L+ L +S N L
Sbjct: 814 VDNRLGNDCFTALEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNEL 866
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 28.7 bits (61), Expect = 0.87
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 491 QNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLS 670
+ + K S + + N I + N L L L +S N L S LENLE+LD+S
Sbjct: 189 EKLQKLSLLSIQSNRITQFEN-LACLSHCLRELYVSHNGLTSF--SGIEVLENLEILDVS 245
Query: 671 HNRLRFIPF 697
+N ++ + +
Sbjct: 246 NNMIKHLSY 254
>SPBC336.06c |rnh1||ribonuclease H Rnh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 264
Score = 28.7 bits (61), Expect = 0.87
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -1
Query: 637 GERGPRYIL*FVPGNVQVNQSTELREQAVSSLLDNVSAQIDVRSLGNVLNKSIS 476
G PR I + G Q N EL QA+ L+N S + +RS N KS++
Sbjct: 149 GNDDPRNISVPLAGEEQTNNRAEL--QAIILALENTSGDLTIRSDSNYSIKSLT 200
>SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase
Agn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 485 FVQNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRST 631
FV N S++ ++ + L QF L+YLN+ +E+ +P ST
Sbjct: 45 FVLNFGNDSWMMSKLTLMYNAADALNLQF--LLYLNLDMSEMSTVPAST 91
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 27.5 bits (58), Expect = 2.0
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 491 QNISKTSYIDLSGNVIKKTGNGLFAQ-FGRLIYLNISRNELEDIPRSTFADLENLEVLDL 667
+N+ + L+ N+ + +G F + LN+S L D+ L L LD+
Sbjct: 238 KNLQFLQTLSLANNLNLYSADGYAVDVFQGINNLNLSSTSLADVAELPVHTLHKLTFLDI 297
Query: 668 SHNRLRFI 691
S N +R I
Sbjct: 298 SENNIRDI 305
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 509 SYIDLSGNVIKKTGNGLFAQFGRLIYLNISRN-ELEDIPRSTFADLENLEVLDLSHNR 679
SY+DL+ + + + G+L+ + N L++ R ++L NL+ L HNR
Sbjct: 2513 SYLDLAMKLKHDLIRTVVSHTGKLLVEKVKGNYHLKEHEREVSSELLNLQQLSAEHNR 2570
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 2.7
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 488 VQNISKTSYID----LSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTF---ADLE 646
V N+ ++S ID L N++ G+ LF FG + ++ R E I RS A
Sbjct: 311 VDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSG 370
Query: 647 NLEVLDLSHNRLR 685
++V +SH R R
Sbjct: 371 GVDVNVISHKRQR 383
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 596 SRNELEDIPRSTFADLENLEVLDLSHNRLRFIPF 697
SRN L P +T +LE ++ DLSH R +PF
Sbjct: 396 SRNSL---PNNTTKELEMKKMDDLSHERYENLPF 426
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 593 ISRNELEDIPRSTFADLENLEVLD 664
+S+N ED+ RS+ ADLE +VL+
Sbjct: 656 VSKNGFEDVERSSVADLEE-DVLE 678
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = +3
Query: 378 TSVQDNKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLRTSI 521
+S+ DN L +++ + N DT+ + ++I+Y +L + +RT+I
Sbjct: 936 SSLCDNVLVRSSPSPKNNFDDTVFISYTSIDYDSPELDSVYEGVRTTI 983
>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 357
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -1
Query: 586 VNQSTELREQAVSSLLDNVSAQIDVRSLGNVLNK 485
VN+S E +E S L S Q+D++ + N++++
Sbjct: 6 VNESVEFQESQESLSLLEASKQLDLKKIQNLVDQ 39
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,716,033
Number of Sequences: 5004
Number of extensions: 50614
Number of successful extensions: 163
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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