Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021175
(715 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 50 2e-06
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06) 44 9e-05
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 43 2e-04
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 42 5e-04
SB_45368| Best HMM Match : fn2 (HMM E-Value=3.1e-32) 41 9e-04
SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08) 40 0.002
SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31) 38 0.006
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_46788| Best HMM Match : LRR_1 (HMM E-Value=9.1e-12) 38 0.008
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) 37 0.019
SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12) 37 0.019
SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14) 36 0.025
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 36 0.033
SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34) 34 0.13
SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17) 33 0.23
SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08) 33 0.30
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_13886| Best HMM Match : 7tm_1 (HMM E-Value=1e-08) 33 0.30
SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) 32 0.40
SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09) 32 0.40
SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14) 32 0.53
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 31 0.93
SB_40911| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_806| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15) 30 1.6
SB_35110| Best HMM Match : LRR_1 (HMM E-Value=3.9e-09) 30 2.1
SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10) 29 2.8
SB_55784| Best HMM Match : CUB (HMM E-Value=3.1e-25) 29 3.7
SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_59514| Best HMM Match : LRR_1 (HMM E-Value=0.16) 29 4.9
SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16) 28 6.5
SB_46310| Best HMM Match : LRR_1 (HMM E-Value=9e-07) 28 6.5
SB_17109| Best HMM Match : LRR_1 (HMM E-Value=2.9e-10) 28 6.5
SB_6590| Best HMM Match : Borrelia_orfA (HMM E-Value=0.33) 28 6.5
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +2
Query: 470 LPRN*FVQNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLEN 649
L +N Q+ ++DLS N I +G F L LN+ N++ + S F L +
Sbjct: 83 LLKNTSFQDYQYLKWLDLSNNDISDIQDGTFENLRYLKQLNLGENKIRTVSASMFKGLVS 142
Query: 650 LEVLDLSHNRLRFIPFQVFEPM 715
LE LDL N L+ +P VF+P+
Sbjct: 143 LEKLDLRFNDLKALPRGVFKPL 164
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +2
Query: 515 IDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIP 694
+ +S +KK G F L +L++S NE+ + A L LEVL +++N L +P
Sbjct: 196 LHVSATGMKKITQGTFGSLMSLEFLDVSFNEIRHFDEESLACLPLLEVLHINNNSLTTVP 255
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 491 QNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLS 670
+N+ ++L N I+ +F L L++ N+L+ +PR F L++L L L
Sbjct: 114 ENLRYLKQLNLGENKIRTVSASMFKGLVSLEKLDLRFNDLKALPRGVFKPLKSLRELFLH 173
Query: 671 HNR 679
NR
Sbjct: 174 DNR 176
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 587 LNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPFQVFE 709
L +SR+ L+ + ++F D + L+ LDLS+N + I FE
Sbjct: 74 LTVSRSPLKLLKNTSFQDYQYLKWLDLSNNDISDIQDGTFE 114
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +2
Query: 503 KTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRL 682
+ S + L N+I + F L LN+ N L +PRS F DL +L LDLS NRL
Sbjct: 69 QVSLLSLYNNLISTIHSNAFRNLTALRSLNLGANRLSVLPRSVFRDLASLRSLDLSANRL 128
Query: 683 RFIPFQVFE 709
+P FE
Sbjct: 129 SSLPEDTFE 137
Score = 34.3 bits (75), Expect = 0.100
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +2
Query: 470 LPRN*FVQNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLEN 649
LPR+ F ++++ +DLS N + F L L + N L IP +TF L
Sbjct: 107 LPRSVF-RDLASLRSLDLSANRLSSLPEDTFEGLSSLQDLFLDFNRLRAIPETTFHGLAA 165
Query: 650 LEVLDLSHNRLR 685
L+ L L +N L+
Sbjct: 166 LQRLRLHNNNLK 177
>SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06)
Length = 239
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +2
Query: 515 IDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIP 694
+DLS N++K+ F+ L +N+SRN +E + R F + L +D S NRL F+P
Sbjct: 100 VDLSRNLLKRVFKHYFSGLEDLKSVNLSRNVIECVEREAFEGCKALSKVDFSGNRLIFVP 159
Query: 695 F 697
+
Sbjct: 160 W 160
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +2
Query: 470 LPRN*FVQNISKTSYIDLSGNVIKKTG----NGLFAQFGRLIYLNISRNELEDIPRSTFA 637
+P N F ++ Y+ + N I + F +L++LN+S N +E I F+
Sbjct: 125 IPDNWF--DLPNLEYMSVDNNQIDRISYPNLEPFFQNRSQLVHLNLSNNAIESIASEAFS 182
Query: 638 DLENLEVLDLSHNRLRFIPFQ 700
L +L+VLDL HN+L I Q
Sbjct: 183 QLIHLKVLDLRHNKLSTITAQ 203
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +2
Query: 500 SKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNR 679
S +S ++ + + +F L + NEL+ IP + F DL NLE + + +N+
Sbjct: 86 STSSSLEFIKTSLSSIADDVFHNLTALEKFILIENELDWIPDNWF-DLPNLEYMSVDNNQ 144
Query: 680 LRFIPFQVFEP 712
+ I + EP
Sbjct: 145 IDRISYPNLEP 155
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +2
Query: 494 NISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSH 673
N+SK ++ LS N + + F L+ L + N+L +P S FA+L N++ LDL
Sbjct: 378 NLSKLWFLQLSKNHLTELPEN-FGNLTSLVELRLDSNQLSSLPAS-FANLTNVKTLDLYR 435
Query: 674 NRLRFIP 694
N+L IP
Sbjct: 436 NKLSEIP 442
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 497 ISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHN 676
+SK ++L+GN ++K + A L L I N+L ++ S F ++NL+VL+L N
Sbjct: 108 LSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDENDLSELSVS-FTLMKNLKVLELGDN 166
Query: 677 RLRFIP 694
+ +P
Sbjct: 167 HIERLP 172
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 560 FAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIP 694
F+Q L L++ N++ +P F DL NLE LD+ NR+ +P
Sbjct: 330 FSQMANLTKLHLDENQVVCLP-DDFGDLVNLEWLDVGQNRIEMLP 373
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 560 FAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLR 685
FA + L++ RN+L +IPR LENL LDL N+L+
Sbjct: 422 FANLTNVKTLDLYRNKLSEIPR-VLLKLENLMRLDLDGNKLK 462
>SB_45368| Best HMM Match : fn2 (HMM E-Value=3.1e-32)
Length = 1206
Score = 41.1 bits (92), Expect = 9e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 518 DLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDL 667
D+ N+IK +G+FA L LN+ NE+ I TF DL NL+ L +
Sbjct: 1119 DIGNNLIKDIPSGVFANVRDLQVLNLHNNEITTIDEDTFTDLTNLKKLTM 1168
>SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08)
Length = 535
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/64 (31%), Positives = 38/64 (59%)
Frame = +2
Query: 494 NISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSH 673
N + +DLS N +K +F F + L ++ N+LE+I ++ + L++L L+L++
Sbjct: 24 NTDRIHSLDLSSNQLKIIPEFVFRGFSNVKNLTLADNDLEEIGNASLSGLKSLLYLNLAN 83
Query: 674 NRLR 685
N+LR
Sbjct: 84 NKLR 87
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +2
Query: 491 QNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLS 670
+ S + L+ N +++ GN + L+YLN++ N+L + + LE ++++
Sbjct: 47 RGFSNVKNLTLADNDLEEIGNASLSGLKSLLYLNLANNKLRKWNGNLSVNTPELETINVT 106
Query: 671 HN 676
N
Sbjct: 107 GN 108
>SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31)
Length = 870
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 515 IDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFAD--LENLEVLDLSHNRLRF 688
+ + GN ++ G F+ + +++S NE+ D P F L NLE DLS N + F
Sbjct: 288 LSIKGNGLRVIGGSCFSNLSGVNIIDLSNNEIRDFPEQLFRVFLLRNLESADLSSNAITF 347
Score = 35.9 bits (79), Expect = 0.033
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 572 GRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPFQVF 706
G L L+I N L I S F++L + ++DLS+N +R P Q+F
Sbjct: 283 GHLQKLSIKGNGLRVIGGSCFSNLSGVNIIDLSNNEIRDFPEQLF 327
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 515 IDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFAD-LENLEVLDLSHNRLRFI 691
++L GN I++ + G + L +S NE++++ TF D L + L ++ N+L+++
Sbjct: 522 VNLRGNAIRELPWRHY--LGNITVLELSNNEIKEL-NMTFVDSLARVVNLAINDNKLKYL 578
Query: 692 P 694
P
Sbjct: 579 P 579
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +2
Query: 494 NISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSH 673
++++ +++L N I + L A L YLN+ NEL+ +P LE L+VL LS
Sbjct: 142 HLTRLRWLNLQNNQITNLPSSL-ADMNGLCYLNLEANELKIVP-EVVTKLEKLQVLILSD 199
Query: 674 NRLRFIP 694
N + +P
Sbjct: 200 NEIGALP 206
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +2
Query: 512 YIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFI 691
Y++L N +K + + +L L +S NE+ +P A LENL L L NRL +
Sbjct: 171 YLNLEANELKIVPE-VVTKLEKLQVLILSDNEIGALPADLNA-LENLRELYLDDNRLMSL 228
Query: 692 PFQVFE 709
P ++ E
Sbjct: 229 PKKLHE 234
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 488 VQNISKTSYIDLSGNVIKKTGNGLFA-QFGRLIYLNISRNELEDIPRSTFADLENLEVLD 664
+ +++ ++LSGN I F +F +YL RN+ + + L LEVLD
Sbjct: 71 ILELTQLQVLNLSGNHITNFPYRFFMLRFLTELYL---RNDFLEFLPAQVCTLVQLEVLD 127
Query: 665 LSHNRLRFIPF 697
L++N +R +P+
Sbjct: 128 LANNFIRTLPY 138
>SB_46788| Best HMM Match : LRR_1 (HMM E-Value=9.1e-12)
Length = 139
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +2
Query: 494 NISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSH 673
++++ +++L N I + L A L YLN+ NEL+ +P LE L+VL LS
Sbjct: 41 HLTRLRWLNLQNNQITNLPSSL-ADMNGLCYLNLEANELKIVP-EVVTKLEKLQVLILSD 98
Query: 674 NRLRFIP 694
N + +P
Sbjct: 99 NEIGALP 105
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +2
Query: 488 VQNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDL 667
+ ++ + +DL N ++K +GL + L YL++S NEL D+PR ++ + L+ L L
Sbjct: 390 IVDLDRLCRLDLQKNKLRKIPSGLL-KMTCLKYLDLSDNELTDLPRKEWSPV--LKTLYL 446
Query: 668 SHNRLRFIP 694
S N L +P
Sbjct: 447 SGNLLETLP 455
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 37.5 bits (83), Expect = 0.011
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +2
Query: 497 ISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHN 676
+S + LS N I T G F +L LN+ RN L I +TF L L+VL+L++N
Sbjct: 108 LSSLEVLKLSKNRIS-TIRGAFWGQNKLQQLNLERNRLSHIQDTTFKHLLALKVLNLANN 166
Query: 677 RLRFI 691
R+ I
Sbjct: 167 RIYHI 171
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 500 SKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHN 676
+K ++L N + + F L LN++ N + I + +F+DL +LE LDLS+N
Sbjct: 132 NKLQQLNLERNRLSHIQDTTFKHLLALKVLNLANNRIYHISQGSFSDLRSLEGLDLSNN 190
Score = 31.9 bits (69), Expect = 0.53
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +2
Query: 566 QFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFI 691
+F L L++SRN I S F L +LEVL LS NR+ I
Sbjct: 83 KFTALKELDLSRNFFTSILASAFNRLSSLEVLKLSKNRISTI 124
>SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +2
Query: 494 NISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSH 673
N S ++ GN I + L + L L +SRN+ E P + + H
Sbjct: 14 NCSGIDEFNIEGNNIAELPEKLLSSLKNLTSLTLSRNKFEVFPAGPPKQFCQVNTFIMEH 73
Query: 674 NRLRFIPFQVF 706
NR++ IPF VF
Sbjct: 74 NRMQKIPFGVF 84
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 587 LNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPFQV 703
L +S N L+ +PR A L L VLD+ N+L IP ++
Sbjct: 328 LILSNNLLKKLPRGIGA-LRKLRVLDIEENKLESIPTEI 365
>SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2
Query: 515 IDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIP 694
ID SGN ++K + L LN++ N L +P + +NL LD+SHNRL +P
Sbjct: 92 IDFSGNSLEKLPAEI-GHMEHLQTLNLNCNALTTVP--PLRNAKNLARLDISHNRLESLP 148
Query: 695 FQVF 706
+F
Sbjct: 149 EGIF 152
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +2
Query: 488 VQNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDL 667
++N + +D+S N ++ G+F LI + N L + L L+VLDL
Sbjct: 128 LRNAKNLARLDISHNRLESLPEGIFNL--ELIAEIYAANNLIQALGNEVGCLHVLKVLDL 185
Query: 668 SHNRLRFIPFQV 703
S N+L IP ++
Sbjct: 186 SENKLEAIPCEL 197
>SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15)
Length = 1466
Score = 36.7 bits (81), Expect = 0.019
Identities = 33/83 (39%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Frame = +2
Query: 485 FVQNIS------KTSYIDLSGNVIKKTGNGLFAQFGRLIYL-------NISRNELEDIPR 625
F+QN+S K LS NV K LF L L N S N +E+I
Sbjct: 928 FIQNLSHLKIVGKGQQFHLSDNVDFKYDLSLFKSLSNLESLLPNIESLNWSHNCIEEI-- 985
Query: 626 STFADLENLEVLDLSHNRLRFIP 694
+ L LEVLDLSHN+LR IP
Sbjct: 986 NHLESLSELEVLDLSHNKLRAIP 1008
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +2
Query: 488 VQNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDL 667
++++S+ +DLS N ++ L A+ G + LN++ N+L + L +L LDL
Sbjct: 988 LESLSELEVLDLSHNKLRAIPTNLNAKLGNIRKLNLANNQLSCV--DGLEKLYSLVELDL 1045
Query: 668 SHNRL 682
N L
Sbjct: 1046 RSNLL 1050
>SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)
Length = 1328
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +2
Query: 488 VQNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDL 667
+ ++ +DLSGN ++ L +L ++N+S NE E P + L+ LDL
Sbjct: 969 LMHLRNVERLDLSGNFLQDFPPLLHEAMPKLEHMNLSHNEFETFP-YCLVKCKRLKSLDL 1027
Query: 668 SHNRLRFIP 694
S+N+L P
Sbjct: 1028 SYNKLTNSP 1036
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 536 IKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPF 697
I G L + L++S N L+D P + LE ++LSHN P+
Sbjct: 961 IADAGEYLLMHLRNVERLDLSGNFLQDFPPLLHEAMPKLEHMNLSHNEFETFPY 1014
>SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14)
Length = 384
Score = 36.3 bits (80), Expect = 0.025
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 512 YIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFI 691
++DLS N I + F L L I+ N+L ++P TF L L+ LDLSHN+L +
Sbjct: 88 HLDLSYNRIGFLPDS-FGYLFHLETLFINNNKLRELP-DTFCYLARLQKLDLSHNQLLHL 145
Query: 692 P 694
P
Sbjct: 146 P 146
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +2
Query: 518 DLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPF 697
++ GN I + L + L L +SRN+ E P + + HNR++ IPF
Sbjct: 291 NIEGNNIAELPEKLLSSLKNLTSLTLSRNKFEVFPAGPPKQFCQVNTFIMEHNRMQKIPF 350
Query: 698 QVF 706
VF
Sbjct: 351 GVF 353
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 587 LNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPFQV 703
L +S N L+ +PR A L L VLD+ N+L IP ++
Sbjct: 753 LILSNNLLKKLPRGIGA-LRKLRVLDIEENKLESIPTEI 790
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 587 LNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPFQVFE 709
L++ N+++ +PR L +L LD+SHN + +P + E
Sbjct: 250 LSLRENKIKILPR-VIGQLVHLVTLDISHNHIENLPAGIDE 289
>SB_51944| Best HMM Match : LRR_1 (HMM E-Value=7.7e-34)
Length = 409
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 560 FAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPFQVFE 709
FA F L YL++ N+L P + L +LEVL LS N +R +P + E
Sbjct: 146 FASFHCLAYLSMENNDLVCFP-GEISKLSSLEVLILSGNSIRELPDSIKE 194
>SB_19634| Best HMM Match : LRR_1 (HMM E-Value=2.6e-17)
Length = 267
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +2
Query: 521 LSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPFQ 700
L+ N I + + +FA + L L++ N L IP L +LE LDL++N + +P++
Sbjct: 110 LAYNKIAELDSKVFAGYSGLTVLDLHDNLLTSIPEDIII-LRDLERLDLTNNDISGLPYK 168
Query: 701 V 703
+
Sbjct: 169 I 169
>SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08)
Length = 537
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 518 DLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHN 676
DL+G + + + + L+ L +S NE+ I + F L +L L LSHN
Sbjct: 29 DLTGASLTSVPDKVLRNYTNLVTLILSNNEIIAIDENAFQGLTSLRNLSLSHN 81
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = +2
Query: 488 VQNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDL 667
V ++ ++ L GN + LF + L +L++ N + ++P + A L+ L L
Sbjct: 36 VLDLQHLEFLYLEGNYLTTLPETLFERLPNLKWLDLRNNHINEVPENLGAH-RCLKNLLL 94
Query: 668 SHNRLRFIPFQV 703
N +R +PF++
Sbjct: 95 EGNNIRTLPFEL 106
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 587 LNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPFQVFE 709
L+++R L +IP DL++LE L L N L +P +FE
Sbjct: 22 LDLNRKNLIEIPPKVL-DLQHLEFLYLEGNYLTTLPETLFE 61
>SB_13886| Best HMM Match : 7tm_1 (HMM E-Value=1e-08)
Length = 536
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 518 DLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFA-DLENLEVLDLSHN 676
DLS I G F + L+ LN+S N ++ S + DL +L +LD++ N
Sbjct: 45 DLSDGGIDYIEPGTFRNYSNLVSLNLSMNRIKSFEVSNISTDLPSLAILDMTGN 98
>SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06)
Length = 575
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 551 NGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRL 682
NGL F LI L + N + I F L+NL+ L+L HN +
Sbjct: 122 NGL-QMFTNLINLTLENNSISAIAPHAFKGLDNLQSLNLRHNNI 164
>SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09)
Length = 224
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +2
Query: 638 DLENLEVLDLSHNRLRFIPFQV 703
+L++LE+LDLS+NRL FIP +
Sbjct: 50 ELKDLELLDLSYNRLSFIPADI 71
>SB_45576| Best HMM Match : LRR_1 (HMM E-Value=2.7e-14)
Length = 829
Score = 31.9 bits (69), Expect = 0.53
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 560 FAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIP 694
+A+ LI L++ L IP F LE+LE LDL++N+L IP
Sbjct: 518 WAKHKSLISLSLENCNLTSIPDVVF-HLESLEKLDLNNNKLTSIP 561
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +2
Query: 488 VQNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDL 667
+ ++ + + L+ N +++ + + + L +L+ N LE +P L LEVL+L
Sbjct: 451 ISDLKQLQKLRLTDNKLRRLPDTI-GRLHNLRFLHCDYNVLESLP-DQMGSLTELEVLEL 508
Query: 668 SHNRL 682
+HN+L
Sbjct: 509 THNKL 513
>SB_40911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +2
Query: 488 VQNISKTSYIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDL 667
+ +++ ++LS N I K GL L LNISRN+++ +P L L V
Sbjct: 146 LDKLTQLRELNLSRNSITKL-EGL-ESLVHLQVLNISRNQIQTLPAPLMKKLRELRVFHF 203
Query: 668 SHNRL 682
++N L
Sbjct: 204 AYNSL 208
>SB_806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -1
Query: 265 ILQPHSLIY*HTSTF-YTNLHNPRYFTSTTDAPKTLILTRTLRNFTFLNETPLHIHDSHV 89
I H ++ + +T+ YT+ N +TSTT+ I + +R + +HI+D H+
Sbjct: 126 IYDKHIRVHIYNNTYVYTSTINTYVYTSTTNTYGVHIYDKHMRVHIYDKHMRVHIYDKHI 185
Query: 88 Q 86
+
Sbjct: 186 R 186
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -1
Query: 232 TSTF-YTNLHNPRYFTSTTDAPKTLILTRTLRNFTFLNETPLHIHDSHVQ 86
T+T+ YT+ N +TSTT+ I + +R + +HI+D H++
Sbjct: 11 TNTYVYTSTTNTYVYTSTTNTYGVHIYDKHMRVHIYDKHMRVHIYDKHIR 60
>SB_15974| Best HMM Match : LRR_1 (HMM E-Value=7.1e-15)
Length = 272
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 548 GNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIP 694
G G L +S N L +P + +L +L+VLD+++N+L+ +P
Sbjct: 56 GGGQLKDLADARILVLSNNRLTSLP-ADLDELRSLQVLDVANNKLKSLP 103
>SB_35110| Best HMM Match : LRR_1 (HMM E-Value=3.9e-09)
Length = 546
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 518 DLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPF 697
++SGN+ +T + FG L L++S N L +ENL L L+ N +R +P
Sbjct: 72 NISGNIHLETYD-----FGHLEKLDLSYNRLTGADILALGLMENLRTLHLTGNEIRRLPI 126
Query: 698 QV 703
++
Sbjct: 127 EM 128
>SB_28720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 575 RLIYLNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPFQV 703
+L L++ N L+ +P + + NL VLD+S NRL +P +
Sbjct: 29 KLSVLSLRDNLLQRLP-TEIGNCRNLHVLDVSGNRLECLPLTI 70
>SB_47473| Best HMM Match : LRR_1 (HMM E-Value=2.8e-10)
Length = 658
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 560 FAQFGRLIYLNISRNELE--DIPRSTFADLENLEVLDLSHNR 679
FA +L YLN+S N + +I R T +L +L VLD+S N+
Sbjct: 112 FAGLNKLEYLNMSDNRISTWEIDRDT--ELRSLVVLDISGNK 151
>SB_55784| Best HMM Match : CUB (HMM E-Value=3.1e-25)
Length = 418
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 512 YIDLSGNVIKKTGNGLFAQFGRLIYLNISRNELEDIPRSTFADLENLEVL 661
+ DLS N+I F L ++SRN L + F L NL VL
Sbjct: 252 HFDLSFNIITNLNARAFTNVTSLDTFDLSRNLLTKLENGAFDGLTNLNVL 301
>SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 587 LNISRNELEDIPRSTFADLENLEVLDLSHNRLRFIPFQVFE 709
L++ LE IP + +L+ LDLS NR++ IP Q+ E
Sbjct: 467 LSLINCNLESIPDAILKQ-SSLKKLDLSRNRIKSIPAQIEE 506
>SB_59514| Best HMM Match : LRR_1 (HMM E-Value=0.16)
Length = 320
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +2
Query: 515 IDLSGNVIKKTGNGLFAQF----GRLIYLNISRNELEDIP-RSTFADLENLEVLDL 667
+D+ N I + G G A+F GRL+ LN+ N + D RS LE E L L
Sbjct: 137 LDICWNEIGRDGAGYIAEFIENNGRLVELNLDNNHITDHGLRSIARGLEVNETLRL 192
>SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16)
Length = 288
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 587 LNISRNELEDIPRSTFADLENLEVLDLSHNRLRFI 691
L++S NE E + D +L LDLSHN ++F+
Sbjct: 108 LDLSFNEFESLDLQE-VDCPSLTQLDLSHNSIQFV 141
>SB_46310| Best HMM Match : LRR_1 (HMM E-Value=9e-07)
Length = 218
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +2
Query: 578 LIYLNISRNELEDIPR----STFADLENLEVLDLSHNR 679
L+ LN+S N L D TF E L LDLSHNR
Sbjct: 100 LLKLNLSNNNLSDKDTVALLETFKGNEKLLWLDLSHNR 137
>SB_17109| Best HMM Match : LRR_1 (HMM E-Value=2.9e-10)
Length = 390
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 578 LIYLNISRNELEDIP--RSTFADLENLEVLDLSHNRL 682
L Y I +LE I STF+ L NL+ LDLS N+L
Sbjct: 222 LAYNLIKHRDLEAIDGLASTFSILTNLKKLDLSENQL 258
>SB_6590| Best HMM Match : Borrelia_orfA (HMM E-Value=0.33)
Length = 479
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 348 CDDEHLTCSNTSVQDNKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLRTSI 521
C E+L S T+ NK T + + T + N YL+ +++ T +LRT++
Sbjct: 52 CKQEYLQHSTTTA--NKSIYNTAQQLQTRVSTTQYNNCKQEYLQHNIYNTAQQLRTTV 107
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,999,444
Number of Sequences: 59808
Number of extensions: 377916
Number of successful extensions: 1037
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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