Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021174X
(398 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW71 Cluster: RNA-dependent RNA polymerase; n=1; Bomb... 73 2e-12
UniRef50_P35928 Cluster: RNA replicase polyprotein; n=2; Erysimu... 39 0.041
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 38 0.072
UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep: Poly... 38 0.072
UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep: Pol... 35 0.67
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 34 0.89
UniRef50_Q9VEE5 Cluster: CG33547-PA; n=6; Eumetazoa|Rep: CG33547... 34 1.2
UniRef50_A0D1A3 Cluster: Chromosome undetermined scaffold_34, wh... 34 1.2
UniRef50_UPI0000E460D2 Cluster: PREDICTED: similar to orphan nuc... 33 1.6
UniRef50_UPI000023F3F3 Cluster: hypothetical protein FG08939.1; ... 33 1.6
UniRef50_Q8QN85 Cluster: EsV-1-204; n=1; Ectocarpus siliculosus ... 33 1.6
UniRef50_UPI000065E9C7 Cluster: KIAA2018 (KIAA2018), mRNA; n=1; ... 33 2.1
UniRef50_Q4S555 Cluster: Chromosome 6 SCAF14737, whole genome sh... 33 2.1
UniRef50_A0UZM9 Cluster: Fibronectin, type III precursor; n=1; C... 33 2.1
UniRef50_UPI000023F1B7 Cluster: hypothetical protein FG01632.1; ... 33 2.7
UniRef50_Q0UHT5 Cluster: Predicted protein; n=1; Phaeosphaeria n... 32 3.6
UniRef50_UPI0000EBE732 Cluster: PREDICTED: hypothetical protein;... 32 4.8
UniRef50_UPI00006CAAA6 Cluster: PHD-finger family protein; n=1; ... 32 4.8
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 32 4.8
UniRef50_A0YPI4 Cluster: Serine/threonine kinase; n=1; Lyngbya s... 32 4.8
UniRef50_Q98FN9 Cluster: Phosphonate monoester hydrolase; n=4; A... 31 8.3
UniRef50_A5ZRS3 Cluster: Putative uncharacterized protein; n=1; ... 31 8.3
UniRef50_P10358 Cluster: RNA replicase polyprotein; n=8; Tymovir... 31 8.3
>UniRef50_Q6AW71 Cluster: RNA-dependent RNA polymerase; n=1; Bombyx
mori Macula-like latent virus|Rep: RNA-dependent RNA
polymerase - Bombyx mori Macula-like latent virus
Length = 1747
Score = 72.9 bits (171), Expect = 2e-12
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +2
Query: 50 NTIHRLYHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMT*TTNKVSLSLAS 208
+T+ HRDAITAPLVETAISNFRHKLQLYPYQVNSKL+ N++ + + S
Sbjct: 8 DTLANTIHRDAITAPLVETAISNFRHKLQLYPYQVNSKLIP-LLNQLGIGVTS 59
Score = 66.5 bits (155), Expect = 2e-10
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +1
Query: 256 RDAITAPVVETAISNFRHKLQLYPYQVNSKLM 351
RDAITAP+VETAISNFRHKLQLYPYQVNSKL+
Sbjct: 16 RDAITAPLVETAISNFRHKLQLYPYQVNSKLI 47
>UniRef50_P35928 Cluster: RNA replicase polyprotein; n=2; Erysimum
latent virus|Rep: RNA replicase polyprotein - Erysimum
latent virus (ELV)
Length = 1748
Score = 38.7 bits (86), Expect = 0.041
Identities = 14/33 (42%), Positives = 26/33 (78%)
Frame = +2
Query: 71 HRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 169
HRD+I+APL+++++S + L+L+PY V +L+
Sbjct: 15 HRDSISAPLLDSSVSQLQSSLELFPYTVPKELV 47
Score = 34.3 bits (75), Expect = 0.89
Identities = 12/32 (37%), Positives = 25/32 (78%)
Frame = +1
Query: 256 RDAITAPVVETAISNFRHKLQLYPYQVNSKLM 351
RD+I+AP++++++S + L+L+PY V +L+
Sbjct: 16 RDSISAPLLDSSVSQLQSSLELFPYTVPKELV 47
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 37.9 bits (84), Expect = 0.072
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 50 NTIHRLYHRDAITAPLVETAISNFRHKLQLYPYQVNSK 163
N + HRD + APL+E+ R L+LYP+ +N++
Sbjct: 8 NNLSSTVHRDTVAAPLLESIAQPLRDSLELYPWAINAE 45
Score = 31.9 bits (69), Expect = 4.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 256 RDAITAPVVETAISNFRHKLQLYPYQVNSK 345
RD + AP++E+ R L+LYP+ +N++
Sbjct: 16 RDTVAAPLLESIAQPLRDSLELYPWAINAE 45
>UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep:
Polyprotein - Grapevine rupestris vein feathering virus
Length = 2068
Score = 37.9 bits (84), Expect = 0.072
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 71 HRDAITAPLVETAISNFRHKLQLYPYQV 154
HRD + +PLVE A R LQLYPY +
Sbjct: 146 HRDTVCSPLVEAAAGPLRDSLQLYPYDI 173
Score = 33.5 bits (73), Expect = 1.6
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 256 RDAITAPVVETAISNFRHKLQLYPYQV 336
RD + +P+VE A R LQLYPY +
Sbjct: 147 RDTVCSPLVEAAAGPLRDSLQLYPYDI 173
>UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep:
Polyprotein - Maize rayado fino virus
Length = 2027
Score = 34.7 bits (76), Expect = 0.67
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 71 HRDAITAPLVETAISNFRHKLQLYPYQV 154
HRD ITAP+VE+ + R L+ YP+ +
Sbjct: 22 HRDTITAPIVESLATPLRRSLERYPWSI 49
Score = 31.9 bits (69), Expect = 4.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 256 RDAITAPVVETAISNFRHKLQLYPYQV 336
RD ITAP+VE+ + R L+ YP+ +
Sbjct: 23 RDTITAPIVESLATPLRRSLERYPWSI 49
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 34.3 bits (75), Expect = 0.89
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 53 TIHRLYHRDAITAPLVETAISNFRHKLQLYPYQV 154
T+ HRD I APL+ET S +R L+ +P+ V
Sbjct: 30 TLSSTIHRDTIAAPLMETLASPYRDSLRDFPWAV 63
>UniRef50_Q9VEE5 Cluster: CG33547-PA; n=6; Eumetazoa|Rep: CG33547-PA
- Drosophila melanogaster (Fruit fly)
Length = 2938
Score = 33.9 bits (74), Expect = 1.2
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +1
Query: 49 QHHPPFISPRRHNGSPSGNRYQQFPSQASTLPISGKFQAHDMNNQQSQLVPGFSA*HGFH 228
QH + P++H SP + QQ Q + + + Q H Q Q+ + A H
Sbjct: 301 QHQQQHLMPQQHRPSPQQHSQQQQQQQQHSQQFAARQQQHQQQQHQQQVQQSYHA--QIH 358
Query: 229 QFSRHSRHP 255
Q + HP
Sbjct: 359 QQPQQHPHP 367
>UniRef50_A0D1A3 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 468
Score = 33.9 bits (74), Expect = 1.2
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1
Query: 64 FISPRRHNGSPSGNRYQQFPSQASTLPISGKFQAHDMNNQQSQLVP 201
F P++ N SP +QQ Q S +PIS +Q + NQQ Q P
Sbjct: 103 FPVPQQVNSSPMLGAFQQSIPQPSQIPISQMYQTAPVLNQQQQYKP 148
>UniRef50_UPI0000E460D2 Cluster: PREDICTED: similar to orphan
nuclear hormone receptor; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to orphan nuclear
hormone receptor - Strongylocentrotus purpuratus
Length = 723
Score = 33.5 bits (73), Expect = 1.6
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = +1
Query: 46 RQHHPPFISPRRHNGSPSGNRYQQFPSQASTLPISGKFQAHDMNNQQSQ--LVPGFSA*H 219
+QHHP SP H + + QQ Q+ T P + Q+ QQSQ + P H
Sbjct: 87 QQHHPHHHSPPHHQATQPHQQVQQQHPQSQTSPPLQQPQSQQQQQQQSQHRVTP-----H 141
Query: 220 GFHQFSRHSRHPRDAITAPV 279
Q + H R + P+
Sbjct: 142 NHQQHTPHQSPQRQSPVTPM 161
>UniRef50_UPI000023F3F3 Cluster: hypothetical protein FG08939.1; n=1;
Gibberella zeae PH-1|Rep: hypothetical protein FG08939.1
- Gibberella zeae PH-1
Length = 2643
Score = 33.5 bits (73), Expect = 1.6
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 82 HNGSPSGNRYQQFPSQASTLPISGKFQAHDMNNQQSQLVPGFSA*HGFHQFSRHSR-HPR 258
H PS + + + +T I G F+ N+QS ++P F A + H R HP+
Sbjct: 2064 HKSQPSQGKTEADKDKLTTSKILGAFKRSSKENRQSMVIPDFQAYQQHQMGAPHQRQHPQ 2123
Query: 259 DAIT 270
T
Sbjct: 2124 QHTT 2127
>UniRef50_Q8QN85 Cluster: EsV-1-204; n=1; Ectocarpus siliculosus
virus 1|Rep: EsV-1-204 - Ectocarpus siliculosus virus 1
Length = 450
Score = 33.5 bits (73), Expect = 1.6
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 34 AWLSRQHHPPFISPRRHNG---SPSGNRYQQFPSQASTLPISGKFQAHDMNNQ 183
AW SRQH P +SP +H+G +P+ Q P+ A++ G +A N +
Sbjct: 397 AWQSRQHIRPLLSPVQHSGLMETPAAAAATQAPADAASTRAPGIAEASFRNGE 449
>UniRef50_UPI000065E9C7 Cluster: KIAA2018 (KIAA2018), mRNA; n=1;
Takifugu rubripes|Rep: KIAA2018 (KIAA2018), mRNA -
Takifugu rubripes
Length = 2068
Score = 33.1 bits (72), Expect = 2.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 55 HPPFISPRRHNGSPSGNRYQQFPSQASTLPISGKFQAHDMNNQ 183
+PP+ SP H PS Q FP+Q T P + K A +NN+
Sbjct: 1926 YPPY-SPAAHPSLPSDVTLQYFPNQMFTSPSADKGSAPPLNNR 1967
>UniRef50_Q4S555 Cluster: Chromosome 6 SCAF14737, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 6
SCAF14737, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2045
Score = 33.1 bits (72), Expect = 2.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 55 HPPFISPRRHNGSPSGNRYQQFPSQASTLPISGKFQAHDMNNQ 183
+PP+ SP H PS Q FP+Q T P + K A +NN+
Sbjct: 1903 YPPY-SPAAHPSLPSDVTLQYFPNQMFTSPSADKGSAPPLNNR 1944
>UniRef50_A0UZM9 Cluster: Fibronectin, type III precursor; n=1;
Clostridium cellulolyticum H10|Rep: Fibronectin, type III
precursor - Clostridium cellulolyticum H10
Length = 1318
Score = 33.1 bits (72), Expect = 2.1
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 62 RLYHRDAITAPLVETAISNFRHKLQLYPYQVNSKLMT*TTNKVSL 196
++Y ++T VE SNFR+ +LY Y N KL + T +S+
Sbjct: 875 KVYECGSVTEFKVEGLTSNFRYYARLYAYDPNKKLRSLPTQSISV 919
Score = 31.5 bits (68), Expect = 6.3
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 262 AITAPVVETAISNFRHKLQLYPYQVNSKLMT*TTNKVSLSLAFSS 396
++T VE SNFR+ +LY Y N KL + T +S+ SS
Sbjct: 881 SVTEFKVEGLTSNFRYYARLYAYDPNKKLRSLPTQSISVRTLRSS 925
>UniRef50_UPI000023F1B7 Cluster: hypothetical protein FG01632.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01632.1 - Gibberella zeae PH-1
Length = 1590
Score = 32.7 bits (71), Expect = 2.7
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 76 RRHNGSPSGNRYQQFPSQASTLPISGKFQAHDMNNQQSQLVPGFSA*HGFHQFSRHSRHP 255
R H +P + QQ P Q P + Q H + Q+ P H F+QF +H++
Sbjct: 44 RAHGHNPQQQQQQQQPVQQ---PQELQQQEHSPQQRHQQMSPDM---HQFNQFQQHAQQD 97
Query: 256 RDAITAPV 279
R I +P+
Sbjct: 98 RGIIQSPL 105
>UniRef50_Q0UHT5 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 642
Score = 32.3 bits (70), Expect = 3.6
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = +1
Query: 58 PPFISPRRHNGSPSGNRYQQFPSQASTLPISGKFQAHDMNNQQSQLVPGF 207
PP I P + G+P RY P G F A+ NQ PGF
Sbjct: 57 PPNIQPPKKKGNPIITRYPPPPGYRGPAQTQGPFGANQYPNQYQPPQPGF 106
>UniRef50_UPI0000EBE732 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 302
Score = 31.9 bits (69), Expect = 4.8
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +1
Query: 46 RQHHPPFISPRRHNGSPSGNRYQQFPSQASTLPISGK 156
RQHH P RRH SP R + FP P SG+
Sbjct: 84 RQHHGPAPGDRRHGESPGTGRSEDFPQ----FPASGR 116
>UniRef50_UPI00006CAAA6 Cluster: PHD-finger family protein; n=1;
Tetrahymena thermophila SB210|Rep: PHD-finger family
protein - Tetrahymena thermophila SB210
Length = 3760
Score = 31.9 bits (69), Expect = 4.8
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 43 SRQHHPPFISPRRHNGSPSG--NRYQQFPSQASTLPISGKFQAHDMNNQQSQL 195
S QHHP F P + N + N Y Q P+Q + LP +FQ QS L
Sbjct: 1538 SYQHHP-FPQPHQKNNELTNYNNNYIQNPAQNTNLPYPNQFQQGGGGQLQSNL 1589
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 31.9 bits (69), Expect = 4.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 71 HRDAITAPLVETAISNFRHKLQLYPYQVNSKL 166
HRD I PL+E +R L YP+ + + L
Sbjct: 103 HRDTIATPLMEALAEPYRQSLSTYPWHIPTNL 134
>UniRef50_A0YPI4 Cluster: Serine/threonine kinase; n=1; Lyngbya sp.
PCC 8106|Rep: Serine/threonine kinase - Lyngbya sp. PCC
8106
Length = 481
Score = 31.9 bits (69), Expect = 4.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 280 LREPLWRLGDGESVD*IGESHAKRRSQGQADFVGCSCHELGIY-LIWVK 137
L + W GD E+ + E+ K R+ ++DF C +LGI +W+K
Sbjct: 343 LSQKQWEYGDEETAKRLREAAGKNRNLHRSDFDYLPCEDLGIINNLWMK 391
>UniRef50_Q98FN9 Cluster: Phosphonate monoester hydrolase; n=4;
Alphaproteobacteria|Rep: Phosphonate monoester hydrolase
- Rhizobium loti (Mesorhizobium loti)
Length = 522
Score = 31.1 bits (67), Expect = 8.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 1 QKSACPWLLRLAWLSRQHHPPFISPRRHN 87
Q+ A PW L+++S HPPFI P +N
Sbjct: 202 QEQAAPWFAHLSFISP--HPPFIVPEPYN 228
>UniRef50_A5ZRS3 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 175
Score = 31.1 bits (67), Expect = 8.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 38 GFHANTIHRLYHRDAITAPLVETAISNFRHKLQLYPYQ 151
GF + R+Y+ D I P++ TAI +F + L +Y Q
Sbjct: 81 GFLSGYAFRIYYDDDIKVPMLLTAIMDFLYNLAVYALQ 118
>UniRef50_P10358 Cluster: RNA replicase polyprotein; n=8;
Tymovirus|Rep: RNA replicase polyprotein - Turnip yellow
mosaic virus
Length = 1844
Score = 31.1 bits (67), Expect = 8.3
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 71 HRDAITAPLVETAISNFRHKLQLYPYQVNSKLM 169
HRD P++E+ + + R +Q YP+ + +L+
Sbjct: 15 HRDPSLHPILESTVDSIRSSIQTYPWSIPKELL 47
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,899,176
Number of Sequences: 1657284
Number of extensions: 8807016
Number of successful extensions: 22205
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 19201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22198
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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