Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021174X
         (398 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   3.4  
AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash pro...    21   3.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   3.4  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   3.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   5.9  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    20   7.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   7.8  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 46  RQHHPPFISPRRHNGSPSGNR 108
           RQH P FI+    + S  GN+
Sbjct: 76  RQHIPNFIAAAFESNSRGGNK 96


>AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash
           protein protein.
          Length = 40

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 46  RQHHPPFISPRRHNGSPSGNR 108
           RQH P FI+    + S  GN+
Sbjct: 16  RQHIPNFIAAAFESNSRGGNK 36


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 85  NGSPSGNRYQQFPSQASTLP 144
           + SPSG+  Q   S AST P
Sbjct: 37  SSSPSGSSPQHSSSSASTSP 56


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 85  NGSPSGNRYQQFPSQASTLP 144
           + SPSG+  Q   S AST P
Sbjct: 37  SSSPSGSSPQHSSSSASTSP 56


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +1

Query: 52  HHPPFISPRRHNGSPSGNRYQQFPSQASTLPISGKFQAHDMNNQQS 189
           HH  F        SP+G+   Q P +    P S    +H MN   S
Sbjct: 75  HHCRFKFSSSVGWSPAGHEEAQSPHRIYMHPESPSKGSHWMNQDIS 120


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 61  PFISPRRHNGSPSGNRYQQFPS 126
           PF+  ++H      + Y+QFP+
Sbjct: 3   PFVVQKKHITEIIADIYRQFPT 24


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 358 TTNKVSLSLAFSS 396
           T N +SLSLAF+S
Sbjct: 465 TPNLLSLSLAFNS 477


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,561
Number of Sequences: 336
Number of extensions: 2164
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)