Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021174X
         (398 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    25   0.77 
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    25   0.77 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   3.1  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   4.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   4.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    22   7.2  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    22   9.5  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 303 PSQASTLPISGKFQAHDINNQQSQLVPGFF 392
           P  AST P  G FQ+   NN  S ++PG +
Sbjct: 10  PGAASTTPSPGAFQSLARNN--SYVIPGLY 37



 Score = 25.0 bits (52), Expect = 1.0
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 121 PSQASTLPISGKFQAHDMNNQQSQLVPG 204
           P  AST P  G FQ+   NN  S ++PG
Sbjct: 10  PGAASTTPSPGAFQSLARNN--SYVIPG 35


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 11/40 (27%), Positives = 15/40 (37%)
 Frame = +1

Query: 82  HNGSPSGNRYQQFPSQASTLPISGKFQAHDMNNQQSQLVP 201
           H   P     QQ+ S     P+  K + HD      +L P
Sbjct: 314 HQHQPQQQHQQQYHSHPHHTPVQFKTELHDNTQYDEELSP 353



 Score = 21.8 bits (44), Expect = 9.5
 Identities = 10/40 (25%), Positives = 14/40 (35%)
 Frame = +3

Query: 264 HNGSRSGNRHQQFPSQASTLPISGKFQAHDINNQQSQLVP 383
           H         QQ+ S     P+  K + HD      +L P
Sbjct: 314 HQHQPQQQHQQQYHSHPHHTPVQFKTELHDNTQYDEELSP 353


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
 Frame = +1

Query: 40  LSRQHHPPFISPRRHNGSPSGNRYQQFPSQAST--LPISGKFQAH 168
           L  Q HPP    +     PS  ++QQ   Q  +  LP  G  + H
Sbjct: 230 LPHQQHPPGAGVQGAGPIPSQQKHQQHQQQQQSVLLPKHGTARQH 274


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 52  HHPPFISPRRHNGSPSGNRYQQFPSQASTLPISGKFQAHDMNNQQSQLVP 201
           HHP  + P  H G    + Y Q PS +   PI  + Q   +  + S   P
Sbjct: 183 HHPALLHPAYHTGL---HHYYQ-PSPSHPQPIVPQPQRASLERRDSLFRP 228


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +1

Query: 52  HHPPFISPRRHNGSPSGNRYQQFPSQASTLPISGKFQAHDMNNQQSQLVP 201
           HHP  + P  H G    + Y Q PS +   PI  + Q   +  + S   P
Sbjct: 183 HHPALLHPAYHTGL---HHYYQ-PSPSHPQPIVPQPQRASLERRDSLFRP 228


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 159 PSS*HEQPTKSACPWLLRLA 218
           PSS H+QP++SA   L++ A
Sbjct: 271 PSSQHQQPSRSASIDLMQSA 290


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 127 QASTLPISGKFQAHDMNN 180
           QA+ +P +GK+  HD ++
Sbjct: 115 QANVVPANGKYVYHDQDD 132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,836
Number of Sequences: 2352
Number of extensions: 8940
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)