Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021170
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    29   0.050
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   4.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   4.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   4.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   5.8  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   7.6  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 0.050
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 280 IGPPAYVYYSHSFRPPXFRSFCRGCFATGFLMTYSWKKL 164
           I P  Y +YS  FR   +R  CR CF +   +  S +KL
Sbjct: 354 INPFIYAFYSADFRLAFWRLTCRKCFKSRTNLDPSNRKL 392


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 727 SGDDSLVSPPPPAHP 683
           SG +  V+P PP HP
Sbjct: 88  SGQNKAVAPYPPNHP 102


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 304 DNQEKPRESIV*QRCSGTSPILRASFCSLEHSRQKKSKSAL 426
           DNQE   E+   + C+ +       FC+LE+ + K+ +  L
Sbjct: 178 DNQEVSMENTENKSCTDSDIEKYKMFCNLENVKLKELRIIL 218


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 727 SGDDSLVSPPPPAHP 683
           SG +  V+P PP HP
Sbjct: 88  SGQNKAVAPYPPNHP 102


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -1

Query: 760 EYDITTQTVFVSGD-DSLVSPPPP 692
           EY  + Q  FV+ D D  + PPPP
Sbjct: 357 EYSPSVQHEFVTFDLDEPLPPPPP 380


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 791 TRITILPSFTRVRHHH 744
           +++ ILP  T+ +HHH
Sbjct: 555 SKMEILPKTTQRQHHH 570


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,989
Number of Sequences: 438
Number of extensions: 5607
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)