Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021168
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   2.4  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   3.2  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   3.2  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   3.2  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   5.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.6  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   7.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   7.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.4  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 335 VNYLCNWLRVKMTKLVMVPQGLLFLLVHSLSKPQICWTKVS 457
           +N   ++ RVK+T     PQG L L      +P+I   K S
Sbjct: 115 MNQDISFSRVKLTNTCSPPQGQLVLSSMHKYQPRILIVKAS 155


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 461 GWIPLSNRFEACSRS 417
           GWI L N FEA ++S
Sbjct: 117 GWIILCNIFEAAAKS 131


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -1

Query: 202 LSGCLYM*LYGIGTGKSFLSILIPQDYKWTAILIKGHRSREQGHFSR 62
           LSG + M   G G G    S+  PQ Y + A +    + RE+  F+R
Sbjct: 91  LSG-MPMPALGFGLGHPLESVPFPQVYSYFAGVNPRKQRRERTTFTR 136


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = -1

Query: 424 QGVHQQEQQPLWYHHQFRHLDSEPIAQVVYQSDAQRPSF 308
           QG     +Q +W    + H    P   V   ++A+ P F
Sbjct: 34  QGAQMGPEQQMWEPQMWHHHSHMPPHSVFAANNAEFPEF 72


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = -1

Query: 424 QGVHQQEQQPLWYHHQFRHLDSEPIAQVVYQSDAQRPSF 308
           QG     +Q +W    + H    P   V   ++A+ P F
Sbjct: 34  QGAQMGPEQQMWEPQMWHHHSHMPPHSVFAANNAEFPEF 72


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 522 RCQDGQCQGGSHLITIGYTNRMDTFVQ 442
           +C D Q QG   +I   Y N+ D + Q
Sbjct: 76  KCTDKQKQGAKTVIQHLYKNKQDWWKQ 102


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 420 ECTSKNNNPCGTITNFVIL 364
           ECT   N P GT+   V++
Sbjct: 504 ECTHVVNIPLGTVVEMVLI 522


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 320 LSIRLVNYLCNWLRVKMTKLV 382
           LS  + ++LCNW     T +V
Sbjct: 203 LSTSMRSHLCNWGSANSTNIV 223


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 320 LSIRLVNYLCNWLRVKMTKLV 382
           LS  + ++LCNW     T +V
Sbjct: 363 LSTSMRSHLCNWGSANSTNIV 383


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 320 LSIRLVNYLCNWLRVKMTKLV 382
           LS  + ++LCNW     T +V
Sbjct: 363 LSTSMRSHLCNWGSANSTNIV 383


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 401  LFLLVHSLSKPQICWTKVSI 460
            +FL+V  L   QI W K+ I
Sbjct: 1341 MFLVVGQLQASQIHWQKIII 1360


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,278
Number of Sequences: 336
Number of extensions: 3866
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)