Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021168
(709 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 124 9e-29
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 94 8e-20
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 89 3e-18
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 83 2e-16
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 80 1e-15
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 78 6e-15
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 77 1e-14
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 77 2e-14
10_08_0620 - 19321612-19323237 76 3e-14
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 71 1e-12
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 68 8e-12
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 50 2e-06
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 49 3e-06
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 40 0.002
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 39 0.003
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 39 0.003
05_03_0653 + 16617121-16617359,16618892-16618955,16619455-166194... 29 2.7
10_07_0011 + 11788818-11789590,11789999-11790098,11790144-117903... 28 8.4
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 124 bits (298), Expect = 9e-29
Identities = 57/77 (74%), Positives = 70/77 (90%)
Frame = +1
Query: 259 SSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASN 438
S DGDVT+TNDGATIL+ MDV++QI KL+V+L+ SQD EIGDGTTGVVV+AG+LLEQA
Sbjct: 59 SPDGDVTITNDGATILEQMDVDNQIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEK 118
Query: 439 LLDKGIHPIRIADGYEM 489
LL++GIHPIRIA+GYE+
Sbjct: 119 LLERGIHPIRIAEGYEL 135
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/55 (58%), Positives = 46/55 (83%)
Frame = +2
Query: 89 SVAFDEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
++AFDE+GRPFIILR+Q+++ RL G DA K++I A + +A LRTSLGP+G+DK+
Sbjct: 2 ALAFDEFGRPFIILREQEKKSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKM 56
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/67 (41%), Positives = 37/67 (55%)
Frame = +3
Query: 507 DHLDSVSEAFPVNKNTRENLI*VAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXETRDVN 686
DHL+ +S F + E L+ MTTL SK+V +C R +AEI E +DVN
Sbjct: 142 DHLEHISHKFEFSATNIEPLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKDVN 201
Query: 687 FELIKVE 707
+LIKVE
Sbjct: 202 LDLIKVE 208
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 94.3 bits (224), Expect = 8e-20
Identities = 42/78 (53%), Positives = 58/78 (74%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
V GDVT+TNDGATIL+M++VEH K+LV+LA+ QD E+GDGTT VV++A LL++ +
Sbjct: 3 VDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGN 62
Query: 436 NLLDKGIHPIRIADGYEM 489
+L+ IHP I GY +
Sbjct: 63 DLVRNKIHPTSIISGYRL 80
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 89.0 bits (211), Expect = 3e-18
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +1
Query: 274 VTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKG 453
VTVTNDGATILK + +++ K+LV +++ QDDE+GDGTT VVVLAG LL +A L++
Sbjct: 54 VTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMK 113
Query: 454 IHPIRIADGYEM 489
IHP+ I GY M
Sbjct: 114 IHPMTIIAGYRM 125
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 125 ILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
+L+D +++ G A + A IA ++T+LGP+G+DK+
Sbjct: 4 VLKDDAVEEK--GERARMAAFIGAMAIADLVKTTLGPKGMDKI 44
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/66 (57%), Positives = 51/66 (77%)
Frame = +1
Query: 274 VTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKG 453
VTVTNDGATILK + +++ K+LV +++ QDDE+GDGTT VVVLAG LL +A L++
Sbjct: 55 VTVTNDGATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMK 114
Query: 454 IHPIRI 471
IHP+ I
Sbjct: 115 IHPMTI 120
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 80.2 bits (189), Expect = 1e-15
Identities = 33/72 (45%), Positives = 51/72 (70%)
Frame = +1
Query: 268 GDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLD 447
G T++NDGATI++++D+ H K+LV +A+SQD E+GDGTT VV+LA L++A ++
Sbjct: 57 GGTTISNDGATIMRLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIE 116
Query: 448 KGIHPIRIADGY 483
G+HP + Y
Sbjct: 117 DGVHPHSLIRSY 128
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 161 GTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
G + S+I A +A T+RT+LGPRG+DKL
Sbjct: 21 GRAQVVSNINACTVVADTVRTTLGPRGMDKL 51
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 78.2 bits (184), Expect = 6e-15
Identities = 33/76 (43%), Positives = 50/76 (65%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
+ + G + VTNDG IL+ +D+ H K +++L+++QD+E+GDGTT V+VLAG +L A
Sbjct: 51 LDASGGIVVTNDGNAILREIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAE 110
Query: 436 NLLDKGIHPIRIADGY 483
+DK HP I Y
Sbjct: 111 AFIDKHYHPTVICRAY 126
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/46 (41%), Positives = 31/46 (67%)
Frame = +2
Query: 116 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
P ++L+D KR +GT ++IQAA+ +A +RT+LGPR + K+
Sbjct: 6 PVLVLKDS--LKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKM 49
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/72 (45%), Positives = 48/72 (66%)
Frame = +1
Query: 268 GDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLD 447
G + VTNDG IL+ +D+ H K +++L+++QD+E+GDGTT V+VLAG +L A +D
Sbjct: 55 GGIVVTNDGNCILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFID 114
Query: 448 KGIHPIRIADGY 483
K HP I Y
Sbjct: 115 KNYHPTVICRAY 126
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +2
Query: 116 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
P ++L+D KR +GT ++IQAA+ +A +RT+LGP+ + K+
Sbjct: 6 PVLVLKDS--LKRESGTKVHHANIQAAKAVADIIRTTLGPQSMLKM 49
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/73 (50%), Positives = 49/73 (67%)
Frame = +1
Query: 259 SSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASN 438
S + +V +TNDGATIL M + ++L +L++SQD GDGTT VVVLAG+LL +A +
Sbjct: 57 SGEQEVIITNDGATILSRMSLLQPAARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQS 116
Query: 439 LLDKGIHPIRIAD 477
LL G HP AD
Sbjct: 117 LLSAGAHPTAAAD 129
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +2
Query: 182 HIQAARQIASTLRTSLGPRGLDKL 253
+I AAR +A +RTSLGPRG+DK+
Sbjct: 31 NIAAARAVADAVRTSLGPRGMDKM 54
>10_08_0620 - 19321612-19323237
Length = 541
Score = 75.8 bits (178), Expect = 3e-14
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +1
Query: 259 SSDGD--VTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQA 432
SS GD V +TNDGATIL M + ++L L++SQD GDGTT VVVLAG+LL +A
Sbjct: 59 SSGGDQAVIITNDGATILSRMPLLQPAARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRA 118
Query: 433 SNLLDKGIHPIRIADGYEM 489
+LL G HP AD +
Sbjct: 119 QSLLSAGAHPTAAADALHL 137
Score = 34.7 bits (76), Expect = 0.073
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 182 HIQAARQIASTLRTSLGPRGLDKL 253
+I A R +A+ RTSLGPRG+DK+
Sbjct: 31 NIAAGRAVAAAARTSLGPRGMDKM 54
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/78 (37%), Positives = 49/78 (62%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
V GD+ +T DG T+LK M +++ ++ + A +QDD GDGTT V+ G L++Q+
Sbjct: 47 VGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSE 106
Query: 436 NLLDKGIHPIRIADGYEM 489
+D+G HP + DG+++
Sbjct: 107 RCIDEGTHPRFLVDGFDV 124
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 67.7 bits (158), Expect = 8e-12
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = +1
Query: 280 VTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIH 459
VTND ATI+ ++V+H K+LV ++Q +EIGDG + AG LLE+A L+ G+H
Sbjct: 60 VTNDAATIVNELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLH 119
Query: 460 PIRIADGY 483
P I GY
Sbjct: 120 PSEIIIGY 127
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/40 (40%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 137 QDRQKRLTGTD-AIKSHIQAARQIASTLRTSLGPRGLDKL 253
++ K L+G D A+ +I A R++++ RTSLGP G++K+
Sbjct: 11 KEGHKHLSGLDEAVLKNIDACRELSAITRTSLGPNGMNKM 50
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = +1
Query: 259 SSDGDVTVTNDGATILKMMDVEHQI----GKLLVQLAQSQDDEIGDGTTGVVVLAGALLE 426
S G + NDG T+ K +++E + KL+ Q A +D GDGTT VVLA ++
Sbjct: 94 SKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMIT 153
Query: 427 QASNLLDKGIHPIRIADGYE 486
+ ++ G +P++I G E
Sbjct: 154 EGVKVVAAGANPVQITRGIE 173
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = +1
Query: 259 SSDGDVTVTNDGATILKMMDVEHQI----GKLLVQLAQSQDDEIGDGTTGVVVLAGALLE 426
S G + NDG T+ + +++E + KL+ Q A +D GDGTT VVLA L+
Sbjct: 98 SKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIA 157
Query: 427 QASNLLDKGIHPIRIADGYE 486
+ ++ G +P++I G E
Sbjct: 158 EGVKVVAAGANPVQITRGIE 177
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 268 GDVTVTNDGATILKMMDV----EHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
G V NDG TI + +++ E+ L+ ++A +D GDGTT VLA +++
Sbjct: 85 GSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGL 144
Query: 436 NLLDKGIHPIRIADGYE 486
+ G +P+ I G +
Sbjct: 145 LSVTSGANPVSIKKGID 161
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 268 GDVTVTNDGATILKMMDV----EHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
G V NDG TI + +++ E+ L+ ++A +D GDGTT VLA +++
Sbjct: 80 GSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGL 139
Query: 436 NLLDKGIHPIRIADGYE 486
+ G +P+ + G +
Sbjct: 140 LSVTSGANPVSLKKGID 156
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMD----VEHQIGKLLV----QLAQSQDDEIGDGTTGVVVLA 411
+ D V NDG TI K ++ VEH LL Q+A + +GDGTT ++LA
Sbjct: 599 IDQDDVPKVINDGITIAKAIELPNAVEHAGAMLLQEHVNQIASKTNSSVGDGTTTAIILA 658
Query: 412 GALLEQASNLLDKGIHPIRIADGYE 486
++ + G +P+ + G +
Sbjct: 659 REIINLGLLAVATGANPVALRKGID 683
>05_03_0653 + 16617121-16617359,16618892-16618955,16619455-16619485,
16619577-16619848,16620528-16620633,16620715-16620872,
16621527-16621714,16621786-16621855,16622814-16622984,
16624363-16624838,16625625-16625871,16626158-16626490,
16627329-16627412,16627751-16627843,16627966-16628025,
16628582-16628680,16628830-16628970,16629207-16629287,
16629895-16629966,16631160-16631231,16632083-16632176,
16632257-16632339,16632455-16632532,16632914-16632970,
16633055-16633132,16633236-16633357,16633463-16633623,
16634419-16634495,16634570-16634683,16634857-16634958,
16635368-16635436,16635437-16635577,16635936-16636109,
16636934-16637063,16637137-16637276,16637369-16637446,
16637813-16637911,16638408-16638803
Length = 1749
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 36 HLSFVHYLNREKWPCSRDRWPLMS 107
H SF++YLN+ KWP +++ L+S
Sbjct: 1661 HDSFINYLNKGKWPDAQNEAVLLS 1684
>10_07_0011 +
11788818-11789590,11789999-11790098,11790144-11790380,
11790683-11790754
Length = 393
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 574 WP*QPWAVKWWSSVTG*WQK 633
WP P+ V+ +SS TG W+K
Sbjct: 192 WPPSPFVVQVYSSATGRWEK 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,817,173
Number of Sequences: 37544
Number of extensions: 444511
Number of successful extensions: 1118
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -