Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021168
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 126 2e-29
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 126 2e-29
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 126 2e-29
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 99 2e-21
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 99 2e-21
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 98 6e-21
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 98 6e-21
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 81 6e-16
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 81 6e-16
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 81 6e-16
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 78 5e-15
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 78 5e-15
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 75 7e-14
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 73 3e-13
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 73 3e-13
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 71 1e-12
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 43 2e-04
Z81062-1|CAB02945.2| 365|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z79752-6|CAB02080.2| 423|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 126 bits (304), Expect = 2e-29
Identities = 55/78 (70%), Positives = 71/78 (91%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
VS DGDVT+TNDGATI++ MDV+H + KL+V+L++SQD EIGDGTTGVVVLAGALLE+A
Sbjct: 63 VSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAE 122
Query: 436 NLLDKGIHPIRIADGYEM 489
L+D+GIHPI+IADG+++
Sbjct: 123 KLIDRGIHPIKIADGFDL 140
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/61 (62%), Positives = 50/61 (81%)
Frame = +2
Query: 71 MALFPGSVAFDEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDK 250
MA + FDE G+PFI++R+Q+ QKR+TG +A+KSHI AAR +A+TLRTSLGPRGLDK
Sbjct: 1 MAQSSAQLLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDK 60
Query: 251 L 253
+
Sbjct: 61 M 61
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +3
Query: 492 CRPGTDHLDSVSEAFPVNKNTRENLI*VAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXE 671
C+ + LDS+S+ FPV RE L+ A T+LGSK+V + R AEI E
Sbjct: 142 CKKALETLDSISDKFPVEN--RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIE 199
Query: 672 TRDVNFELIKVE 707
++DVNFE+IK+E
Sbjct: 200 SKDVNFEMIKME 211
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 126 bits (304), Expect = 2e-29
Identities = 55/78 (70%), Positives = 71/78 (91%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
VS DGDVT+TNDGATI++ MDV+H + KL+V+L++SQD EIGDGTTGVVVLAGALLE+A
Sbjct: 63 VSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAE 122
Query: 436 NLLDKGIHPIRIADGYEM 489
L+D+GIHPI+IADG+++
Sbjct: 123 KLIDRGIHPIKIADGFDL 140
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/61 (62%), Positives = 50/61 (81%)
Frame = +2
Query: 71 MALFPGSVAFDEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDK 250
MA + FDE G+PFI++R+Q+ QKR+TG +A+KSHI AAR +A+TLRTSLGPRGLDK
Sbjct: 1 MAQSSAQLLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDK 60
Query: 251 L 253
+
Sbjct: 61 M 61
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +3
Query: 492 CRPGTDHLDSVSEAFPVNKNTRENLI*VAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXE 671
C+ + LDS+S+ FPV RE L+ A T+LGSK+V + R AEI E
Sbjct: 142 CKKALETLDSISDKFPVEN--RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIE 199
Query: 672 TRDVNFELIKVE 707
++DVNFE+IK+E
Sbjct: 200 SKDVNFEMIKME 211
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 126 bits (304), Expect = 2e-29
Identities = 55/78 (70%), Positives = 71/78 (91%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
VS DGDVT+TNDGATI++ MDV+H + KL+V+L++SQD EIGDGTTGVVVLAGALLE+A
Sbjct: 63 VSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAE 122
Query: 436 NLLDKGIHPIRIADGYEM 489
L+D+GIHPI+IADG+++
Sbjct: 123 KLIDRGIHPIKIADGFDL 140
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/61 (62%), Positives = 50/61 (81%)
Frame = +2
Query: 71 MALFPGSVAFDEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDK 250
MA + FDE G+PFI++R+Q+ QKR+TG +A+KSHI AAR +A+TLRTSLGPRGLDK
Sbjct: 1 MAQSSAQLLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDK 60
Query: 251 L 253
+
Sbjct: 61 M 61
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +3
Query: 492 CRPGTDHLDSVSEAFPVNKNTRENLI*VAMTTLGSKVVVKCHRLMAEIXXXXXXXXXXXE 671
C+ + LDS+S+ FPV RE L+ A T+LGSK+V + R AEI E
Sbjct: 142 CKKALETLDSISDKFPVEN--RERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSVADIE 199
Query: 672 TRDVNFELIKVE 707
++DVNFE+IK+E
Sbjct: 200 SKDVNFEMIKME 211
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 99 bits (238), Expect = 2e-21
Identities = 46/76 (60%), Positives = 59/76 (77%)
Frame = +1
Query: 259 SSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASN 438
S +GDVT+TNDGATIL M V H K+LV+L+++QD E GDGTT VVV+AGALL+ A N
Sbjct: 62 SGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQN 121
Query: 439 LLDKGIHPIRIADGYE 486
LL KGIHP I++ ++
Sbjct: 122 LLSKGIHPTTISESFQ 137
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 179 SHIQAARQIASTLRTSLGPRGLDKL 253
S+I AA+ +A +RTSLGPRG+DK+
Sbjct: 35 SNIVAAKAVADAVRTSLGPRGMDKM 59
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 99 bits (238), Expect = 2e-21
Identities = 46/76 (60%), Positives = 59/76 (77%)
Frame = +1
Query: 259 SSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASN 438
S +GDVT+TNDGATIL M V H K+LV+L+++QD E GDGTT VVV+AGALL+ A N
Sbjct: 62 SGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQN 121
Query: 439 LLDKGIHPIRIADGYE 486
LL KGIHP I++ ++
Sbjct: 122 LLSKGIHPTTISESFQ 137
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +2
Query: 179 SHIQAARQIASTLRTSLGPRGLDKL 253
S+I AA+ +A +RTSLGPRG+DK+
Sbjct: 35 SNIVAAKAVADAVRTSLGPRGMDKM 59
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 97.9 bits (233), Expect = 6e-21
Identities = 44/78 (56%), Positives = 59/78 (75%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
V GDV VTNDGATILK ++VEH GK+LV+LAQ QD+E+GDGTT VV++A LL++A
Sbjct: 50 VDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRAD 109
Query: 436 NLLDKGIHPIRIADGYEM 489
L+ + +HP I +GY +
Sbjct: 110 ELVKQKVHPTTIINGYRL 127
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 149 KRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
KR TG ++ AA IA+ +++SLGP GLDK+
Sbjct: 14 KRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKM 48
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 97.9 bits (233), Expect = 6e-21
Identities = 44/78 (56%), Positives = 59/78 (75%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
V GDV VTNDGATILK ++VEH GK+LV+LAQ QD+E+GDGTT VV++A LL++A
Sbjct: 50 VDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRAD 109
Query: 436 NLLDKGIHPIRIADGYEM 489
L+ + +HP I +GY +
Sbjct: 110 ELVKQKVHPTTIINGYRL 127
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 149 KRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
KR TG ++ AA IA+ +++SLGP GLDK+
Sbjct: 14 KRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKM 48
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 81.4 bits (192), Expect = 6e-16
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +1
Query: 262 SDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNL 441
S G + VTNDGATILK + V++ K+LV ++ +QD E+GDGTT V VLA LL++A L
Sbjct: 54 SAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKL 113
Query: 442 LDKGIHPIRIADGY 483
+++ IHP I GY
Sbjct: 114 VNQRIHPQTIISGY 127
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 116 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
P IL+D +++R G A S A I ++++LGP+G+DK+
Sbjct: 3 PVQILKDNAQEER--GESARLSSFVGAIAIGDLVKSTLGPKGMDKI 46
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 81.4 bits (192), Expect = 6e-16
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +1
Query: 262 SDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNL 441
S G + VTNDGATILK + V++ K+LV ++ +QD E+GDGTT V VLA LL++A L
Sbjct: 54 SAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKL 113
Query: 442 LDKGIHPIRIADGY 483
+++ IHP I GY
Sbjct: 114 VNQRIHPQTIISGY 127
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 116 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
P IL+D +++R G A S A I ++++LGP+G+DK+
Sbjct: 3 PVQILKDNAQEER--GESARLSSFVGAIAIGDLVKSTLGPKGMDKI 46
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 81.4 bits (192), Expect = 6e-16
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = +1
Query: 262 SDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNL 441
S G + VTNDGATILK + V++ K+LV ++ +QD E+GDGTT V VLA LL++A L
Sbjct: 54 SAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKL 113
Query: 442 LDKGIHPIRIADGY 483
+++ IHP I GY
Sbjct: 114 VNQRIHPQTIISGY 127
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 116 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
P IL+D +++R G A S A I ++++LGP+G+DK+
Sbjct: 3 PVQILKDNAQEER--GESARLSSFVGAIAIGDLVKSTLGPKGMDKI 46
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 78.2 bits (184), Expect = 5e-15
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
V S G T++NDGATILK++D+ +V +A+SQD E+GDGTT VVVLA +L+Q
Sbjct: 50 VDSKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMK 109
Query: 436 NLLDKGIHP 462
++ G+HP
Sbjct: 110 PFIEDGVHP 118
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +2
Query: 116 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
P I+L+D K+ G I S+I A + +A ++RT+LGPRGLDKL
Sbjct: 5 PIILLKDGTENKQ--GKGQIISNINACQVVADSIRTTLGPRGLDKL 48
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 78.2 bits (184), Expect = 5e-15
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
V S G T++NDGATILK++D+ +V +A+SQD E+GDGTT VVVLA +L+Q
Sbjct: 50 VDSKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMK 109
Query: 436 NLLDKGIHP 462
++ G+HP
Sbjct: 110 PFIEDGVHP 118
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +2
Query: 116 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
P I+L+D K+ G I S+I A + +A ++RT+LGPRGLDKL
Sbjct: 5 PIILLKDGTENKQ--GKGQIISNINACQVVADSIRTTLGPRGLDKL 48
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 74.5 bits (175), Expect = 7e-14
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +1
Query: 280 VTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLDKGIH 459
VTND ATILK ++++H ++++ + Q+ +IGD T VV+LA ALLE A+NL+ G+
Sbjct: 64 VTNDAATILKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMT 123
Query: 460 PIRIADGYE 486
P +A GYE
Sbjct: 124 PQEVAAGYE 132
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
VS GD+ +T DG +L M ++H ++ + + +QDD GDGTT V+L G LL+QA
Sbjct: 48 VSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAE 107
Query: 436 NLLDKGIHPIRIADGYE 486
+L+ +G+HP + +G+E
Sbjct: 108 SLVLEGLHPRIVTEGFE 124
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = +1
Query: 256 VSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
VS GD+ +T DG +L M ++H ++ + + +QDD GDGTT V+L G LL+QA
Sbjct: 48 VSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAE 107
Query: 436 NLLDKGIHPIRIADGYE 486
+L+ +G+HP + +G+E
Sbjct: 108 SLVLEGLHPRIVTEGFE 124
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/72 (40%), Positives = 47/72 (65%)
Frame = +1
Query: 268 GDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQASNLLD 447
G + +TNDG IL+ + V+H K ++++A++QD+E GDGTT V++LAG ++ A L+
Sbjct: 57 GGIVMTNDGNAILREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLE 116
Query: 448 KGIHPIRIADGY 483
+ HP I Y
Sbjct: 117 QKTHPTLIIKAY 128
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 113 RPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKL 253
+P I+L KR +G +I A + IA +RTSLGPR + K+
Sbjct: 7 QPIIVL--SQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKM 51
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 268 GDVTVTNDGATILKMMDVEHQI----GKLLVQLAQSQDDEIGDGTTGVVVLAGALLEQAS 435
G +T DG T+ K +D++ + KL+ +A ++E GDGTT VLA A+ ++
Sbjct: 60 GSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLARAIAKEGF 119
Query: 436 NLLDKGIHPIRIADG 480
+ +G + + I G
Sbjct: 120 ESIRQGGNAVEIRRG 134
>Z81062-1|CAB02945.2| 365|Caenorhabditis elegans Hypothetical
protein F15A4.1 protein.
Length = 365
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/42 (23%), Positives = 20/42 (47%)
Frame = +2
Query: 320 LSIRLVNYLCNWLRVKMTKLVMVPQGLLFLLVHSLSKPQICW 445
++I +LC W KL+++P + + +KP + W
Sbjct: 63 MNIMTALFLCQWFEAIAAKLLIIPYQIGVIRFSDYNKPYVSW 104
>Z79752-6|CAB02080.2| 423|Caenorhabditis elegans Hypothetical
protein D2005.6 protein.
Length = 423
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1
Query: 490 PSHNHRLYESDGYLCPTDLRLAQGVHQQEQQPLWYHHQFRHLDSEP 353
P++ H Y +GY+ PT Q Q+Q P + + + H + +P
Sbjct: 53 PAYLHEPYGQNGYIDPTYGDTQQQHPSQQQYPYYGYPSYSHYNYQP 98
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical protein
W05B2.4 protein.
Length = 2265
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 481 NHRLYESDGYLCPTDLRLAQGVHQQEQQPLWYH 383
+H+ Y DG LC +D ++ + E+ W H
Sbjct: 1747 DHKTYWKDGKLCNSDAQIRMIIITDEEDYAWLH 1779
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical protein
K03H1.5 protein.
Length = 1385
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 421 GVHQQEQQPLWYHHQFRHLDSEPIAQVVYQSD 326
G + +P W H QF+HLD Q + QS+
Sbjct: 947 GTRRFFDKPHWKHQQFKHLDIRNPLQNMNQSE 978
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,535,543
Number of Sequences: 27780
Number of extensions: 364673
Number of successful extensions: 859
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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