Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021166
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0106 - 25611239-25611295,25611388-25611477,25611582-256116... 39 0.003
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 30 1.6
01_03_0137 - 12904727-12904981,12907192-12907605 30 2.1
08_02_0646 + 19676133-19677581 29 2.7
05_07_0148 + 28024820-28025293,28025655-28025702,28026034-280260... 29 2.7
02_02_0489 + 10869482-10871218 29 2.7
01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668... 29 2.7
10_07_0020 - 11944054-11944653,11944734-11944847,11944917-119449... 29 3.6
03_05_0519 - 25131614-25134778 29 3.6
11_06_0184 - 21006659-21009823 29 4.8
03_06_0746 + 35961431-35961488,35963941-35964021,35964650-359647... 29 4.8
01_06_1610 - 38625427-38625726,38625814-38625885,38626001-386261... 29 4.8
04_04_1002 - 30025914-30026021,30026116-30026297,30026626-300269... 28 6.3
12_02_0689 + 22160627-22160720,22161331-22161425,22161679-221618... 28 8.3
12_02_0466 + 19403855-19404347,19404359-19404582,19404659-194050... 28 8.3
10_01_0275 - 2904601-2904900,2905083-2905233,2905522-2905598,290... 28 8.3
03_02_0509 - 9003330-9003446,9003587-9003673,9004113-9004280,900... 28 8.3
>05_06_0106 -
25611239-25611295,25611388-25611477,25611582-25611669,
25611757-25611836,25611968-25612120,25612403-25612546,
25612633-25612884,25612985-25613116,25613207-25613287,
25613368-25613488,25613930-25614025,25614195-25614298,
25614481-25614567,25614690-25614803,25614871-25614930,
25615007-25615102,25615316-25615366,25615457-25615562,
25615642-25615713,25616117-25616172,25616446-25616508,
25616636-25616764
Length = 743
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +3
Query: 150 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKIRLLKMVMLKKATM 323
K E PE+ T T PKE P KK+ K+ E AES VP+KP+K + L ++ ++ + +
Sbjct: 476 KNETRPEK-TETAPKEKPSKKNRKKEKEVAES-----VPVKPKKEKKLLVLPMEASVL 527
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 144 VDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAE 242
V KK P+E + E K+ K++P KVEA+E
Sbjct: 239 VQKKAAPPKESKAKEAKKEAPKEAPKPKVEASE 271
>01_03_0137 - 12904727-12904981,12907192-12907605
Length = 222
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 257 NGTDEAPEDS-PAENGDAEESNDASENGDATEK-KETGVK 370
NG +E E++ E GD +E D E GD E+ E G K
Sbjct: 45 NGEEEVEEEAVDGEEGDGDEEGDGEEEGDDEEEDAEEGEK 84
>08_02_0646 + 19676133-19677581
Length = 482
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +3
Query: 132 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKIRLLKMVMLK 311
ADAAV K +V + +T + PAK +A + K + P+KP K + V+
Sbjct: 119 ADAAVVKAKVPKTDKAATAKSKGTDTAKPAKVAKA--GSAKAVKPVKPVKTAKSESVVAA 176
Query: 312 KA 317
KA
Sbjct: 177 KA 178
>05_07_0148 +
28024820-28025293,28025655-28025702,28026034-28026080,
28026334-28026496,28026595-28026656,28026820-28027003,
28027093-28027182,28027553-28027686,28027747-28027936,
28028103-28029033,28029860-28030065
Length = 842
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 153 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKIR 287
K V EEV + + + PAKKV A++ KR+ K K R
Sbjct: 644 KPVTKEEVAAMRAQFKEIDARPAKKVAEAKARKKRVAMKKLDKAR 688
>02_02_0489 + 10869482-10871218
Length = 578
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 147 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVP 266
++ E + + +EP+ PVKK AKK + AE+ KR P
Sbjct: 89 EEGEEVEGDSSESEPEPEPVKKESAKKAK-AEAKKKRAAP 127
>01_05_0501 +
22764978-22765896,22766087-22766349,22766613-22766836,
22767419-22767749,22767968-22768372
Length = 713
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 383 PQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLG 273
PQI L +W + + H+ +Q+H QQANLLG
Sbjct: 461 PQIIELSAGLVHMWRNMYECHQ--VQNHIAQQANLLG 495
>10_07_0020 -
11944054-11944653,11944734-11944847,11944917-11944976,
11945154-11945474,11945556-11945594
Length = 377
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 254 KNGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 385
K + +D PA + E++ D E G+ +KK+T VK+KS A
Sbjct: 91 KKDKPKPADDLPALDPSIEQALDEEEIGE--DKKKTAVKKKSAA 132
>03_05_0519 - 25131614-25134778
Length = 1054
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 123 ATMADAAVDKKEVAP-EEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQK 281
A A AA +KK AP EE + E K+ K + A K E E + K+ P K +K
Sbjct: 182 AAAASAAEEKKPEAPAEEKKAEEAKKEEKKSAEADKKE--EKDDKKKSPEKGKK 233
>11_06_0184 - 21006659-21009823
Length = 1054
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 251 QKNGTDEAPEDSPAENGDAEESNDASENGDATEK 352
Q +G+D+ P P + GD E+ S+ GD +K
Sbjct: 303 QSDGSDQPPPPQP-DGGDTEQQPPQSDGGDKKQK 335
>03_06_0746 +
35961431-35961488,35963941-35964021,35964650-35964713,
35965538-35966216
Length = 293
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 248 WQKNGTDEAPEDS-PAENGDAEESNDASENGDATEKKETGV 367
W + GT E +D AE G+ E D +GD E GV
Sbjct: 220 WWREGTGEESDDVLSAEIGNGAEETDEPGDGDLAASAEQGV 260
>01_06_1610 -
38625427-38625726,38625814-38625885,38626001-38626117,
38626509-38626674,38626768-38626815,38626889-38626962,
38627126-38627243,38627332-38627420,38627512-38627687,
38627785-38627898,38627981-38628051,38628431-38628477,
38628581-38628721,38629095-38629136
Length = 524
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 257 NGTDEAPEDSPAENGDAEESNDASENGDATE 349
+G + + SP+ NGDA+E ++ +N D+ +
Sbjct: 433 SGENNSINPSPSSNGDAKEPTESQDNDDSDD 463
>04_04_1002 -
30025914-30026021,30026116-30026297,30026626-30026908,
30026992-30027630
Length = 403
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 225 KVEAAESNGKRMVPMKPQKIRLLKMVMLKKATMHLRTVMPQKRKRLV*RGNLW 383
KV+A + K K Q + LL+ V++ + T+ + P+K+KRL + +L+
Sbjct: 351 KVQAKDLVEKEFTLTKIQVMELLRAVLVTRNTLSSVLLPPKKKKRLHLQSSLY 403
>12_02_0689 +
22160627-22160720,22161331-22161425,22161679-22161822,
22162256-22162513,22162595-22162666,22162759-22162824,
22163212-22163346,22163562-22163697,22163807-22163983,
22164086-22164192,22164281-22164421,22164604-22164740,
22164823-22165076,22165158-22165300,22165423-22165581,
22166049-22166461,22167369-22167474
Length = 878
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +3
Query: 120 LATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKIRLLKM 299
+AT+ AA+ KKE PE + ST+ + + A N + M + ++R
Sbjct: 654 IATLK-AALAKKEGEPENIQSTQSSPDMYRIKRGNAIPAFPKNRQPMEEVGNLEVRNNAT 712
Query: 300 VMLKKATMHLRTVMPQ 347
M KKA+ V+ +
Sbjct: 713 PMQKKASFQFSGVLSE 728
>12_02_0466 +
19403855-19404347,19404359-19404582,19404659-19405093,
19405180-19406024,19406353-19406635,19406903-19406977
Length = 784
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 150 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKIRLLK 296
+ + P S K SP K KK A GK VP+ P+K+ L K
Sbjct: 524 RPHLPPPAKRSKRAKSSPPKLDTRKKA-AGTGRGKIKVPLAPKKLDLGK 571
>10_01_0275 -
2904601-2904900,2905083-2905233,2905522-2905598,
2907201-2907390,2908796-2908981,2910521-2910571,
2911476-2911885,2912252-2912509,2912768-2913070
Length = 641
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 173 FLRCNFLLVDGCVCHCCKV 117
F RC FLL C+ +CCK+
Sbjct: 423 FGRCCFLLKSVCLANCCKI 441
>03_02_0509 -
9003330-9003446,9003587-9003673,9004113-9004280,
9004835-9004957,9005081-9005170,9005275-9005295
Length = 201
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 251 QKNGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKS 379
+K+G ++ E +GDA S + DA E+KE K S
Sbjct: 149 EKDGREQELEKQKLMDGDAGNSRLGPDRADAEEEKELDSKHSS 191
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,785,035
Number of Sequences: 37544
Number of extensions: 261845
Number of successful extensions: 1050
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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