Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021166
(705 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014) 32 0.52
SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0) 31 0.69
SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15) 31 0.91
SB_50934| Best HMM Match : HSP90 (HMM E-Value=0) 31 0.91
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 31 0.91
SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72) 30 1.6
SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49) 30 2.1
SB_26361| Best HMM Match : fn3 (HMM E-Value=0) 30 2.1
SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22) 30 2.1
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10) 30 2.1
SB_28099| Best HMM Match : SAP (HMM E-Value=0.8) 30 2.1
SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72) 30 2.1
SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082) 30 2.1
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 30 2.1
SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31) 29 2.8
SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22) 29 2.8
SB_37086| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_32384| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_37780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_39187| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_30368| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 29 3.7
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_38251| Best HMM Match : fn3 (HMM E-Value=2.1e-05) 29 4.9
SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11) 29 4.9
SB_15280| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 29 4.9
SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5) 29 4.9
SB_42367| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_24428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045) 28 6.4
SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 28 8.5
SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043) 28 8.5
SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1) 28 8.5
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 28 8.5
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.5
>SB_32573| Best HMM Match : His_leader (HMM E-Value=0.0014)
Length = 134
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = -2
Query: 425 SSREWSFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 258
SS ++ H P SSS S+ + HH + HHH + + +H
Sbjct: 76 SSSSSIIIIIHHHHPSSSSSSSSIIIIHHHHPSSSSIIIIHHHHHHPSSSSIINHH 131
>SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0)
Length = 1596
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
EA E S E G A E+ +ASE G+A+E ETG
Sbjct: 31 EAGEASETGEAGKASEAGEASETGEASEASETG 63
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 281 DSPAENGDAEESNDASENGDATEKKETGVKRKS 379
++ E G+A E+ +ASE +A E ETG K+
Sbjct: 64 EATGEAGEASETGEASEASEAGEASETGEAGKA 96
>SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15)
Length = 979
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 254 KNGT-DEAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
+NG EA ED A E G+ E+++ASE G+A+E E G
Sbjct: 790 ENGVASEAGEDGEASEAGEDGEASEASEAGEASEASEAG 828
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 251 QKNGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 385
+ G EA E S A G+A E+ +ASE G+A+E E +++A
Sbjct: 913 EAGGASEAGEASEA--GEASEAGEASEAGEASEAVEASEASEAIA 955
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
EA ED A E +A E+++ASE G+A+E E G
Sbjct: 805 EAGEDGEASEASEAGEASEASEAGEASEASEAG 837
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 269 EAPEDSPAENGDAEESNDASENGDATEKKETG 364
EA E + G+A E+++ASE G+A+E E G
Sbjct: 689 EASEAAGEATGEAGEASEASEAGEASEAGEAG 720
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +2
Query: 251 QKNGTDEAPEDSPA----ENGDAEESNDASENGDATEKKETG 364
+ G EA E A E G+A E+ +ASE G+A++ E G
Sbjct: 421 EAGGASEASEAGEAGGASEAGEASEAGEASEAGEASKASEAG 462
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKETGVKRKSV 382
EA E A E G+A E+ +ASE G+A++ E G ++V
Sbjct: 463 EASEAGGASEAGEASEAGEASEAGEASKASEAGEASEAV 501
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 251 QKNGTDEAPEDSPA-ENGDAEESNDASENGDATEKKETGVKRKSVA 385
+ G EA E S A E +A E++ ASE G+A+E E +++A
Sbjct: 466 EAGGASEAGEASEAGEASEAGEASKASEAGEASEAVEASEASEAIA 511
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKETGV 367
EA E A + G+A E+ +ASE G+A+E E GV
Sbjct: 760 EASEAGEAGKAGEASEAGEASEVGEASEAGENGV 793
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
E E S A E G+A E+ +ASE G+A+E E G
Sbjct: 736 EGSEASKAGEAGEAVEAGEASEAGEASEAGEAG 768
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
EA E S A E G+A E+++A E G+A E E G
Sbjct: 817 EAGEASEASEAGEASEASEAGEAGEAGEAGEAG 849
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
E E S A E G+A E+ +ASE G+A E E G
Sbjct: 653 EGSEASKAGEAGEAVEAGEASEAGEAIEAGEAG 685
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 263 TDEAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
T EA E S A E G+A E+ +A E G+A+E G
Sbjct: 698 TGEAGEASEASEAGEASEAGEAGEAGEASEAGVAG 732
>SB_50934| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 855
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 263 TDEAPEDSPAENGDAEESNDASENGD-ATEKKETGVK 370
T E PE +P + DA +S DAS D A +++E +K
Sbjct: 24 TKEEPESAPKVDDDAGKSRDASRTDDEAVQREEEAIK 60
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 277 WGFIGTILLPLLSAASTFLAGDFLTGDSFGSVEVTSSGATS-FLSTAAS 134
W T + P+ FL DFLT S S +TSS + S FLS ++S
Sbjct: 295 WTIASTNVGPISEQQGIFLPSDFLTSSSLPSDFLTSSSSLSDFLSLSSS 343
>SB_51808| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 516
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 EPKESPVKKSPAKKVEAAE-SNGKRMVPMKPQKIRLLKMVMLKKATMH 326
EP + +K +K+ E S G+R+VP K +K+ L K + +KK ++
Sbjct: 383 EPDKKTLKAQLLQKIHTKEYSIGERIVPRKYEKLILTKDLKIKKVDVY 430
>SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Frame = +3
Query: 120 LATMADAAVDKKEVAPEEVTSTEPKESP-------VKKSPAKKVEAAESNGKRMVPMKPQ 278
L T+ D KE E+ T E KE V++ A++V+ +S GK+ KP+
Sbjct: 14 LITVLATEEDNKESKEEKSTDVEKKEEEEDGKVEVVEEKAAEEVKVTKSKGKKKKSKKPK 73
Query: 279 KIRLLKMV 302
K + K+V
Sbjct: 74 KGKKKKIV 81
>SB_4259| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 EPKESPVKKSPAKKVEAAE-SNGKRMVPMKPQKIRLLKMVMLKKATMH 326
EP + +K +K+ E S G+R+VP K +K+ L K + +KK ++
Sbjct: 441 EPDKKTLKAQLLQKIHTKEYSIGERIVPRKYEKLILTKDLKIKKVDVY 488
>SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 EPKESPVKKSPAKKVEAAE-SNGKRMVPMKPQKIRLLKMVMLKKATMH 326
EP + +K +K+ E S G+R+VP K +K+ L K + +KK ++
Sbjct: 311 EPDKKTLKAQLLQKIHTKEYSIGERIVPRKYEKLILTKDLKIKKVDVY 358
>SB_57268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 EPKESPVKKSPAKKVEAAE-SNGKRMVPMKPQKIRLLKMVMLKKATMH 326
EP + +K +K+ E S G+R+VP K +K+ L K + +KK ++
Sbjct: 376 EPDKKTLKAQLLQKIHTKEYSIGERIVPRKYEKLILTKDLKIKKEDVY 423
>SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)
Length = 1205
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 EPKESPVKKSPAKKVEAAE-SNGKRMVPMKPQKIRLLKMVMLKKATMH 326
EP + +K +K+ E S G+R+VP K +K+ L K + +KK ++
Sbjct: 301 EPDKKTLKAQLLQKIHTKEYSIGERIVPRKYEKLILTKDLKIKKEDVY 348
>SB_26361| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1898
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 272 APEDSPAENGDAEESNDASENGDATEKKETG 364
A +D+ A+NG A + NDA GD + + G
Sbjct: 436 AGDDNDADNGGAGDDNDADNGGDGCDGDDDG 466
>SB_25694| Best HMM Match : RVT_1 (HMM E-Value=1.9e-22)
Length = 1797
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 EPKESPVKKSPAKKVEAAE-SNGKRMVPMKPQKIRLLKMVMLKKATMH 326
EP + +K +K+ E S G+R+VP K +K+ L K + +KK ++
Sbjct: 311 EPDKKTLKAQLLQKIHTKEYSIGERIVPRKYEKLILTKDLKIKKEDVY 358
>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
Length = 416
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -2
Query: 410 SFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 258
S ++ H P S S+ + HH S + HHH ++++ +H +H
Sbjct: 97 SIIIIHHHHP----SSSSIIIIHHHPSSSIIIIIHHHHPSSSSIIIIHHHH 143
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = -2
Query: 410 SFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 258
S ++ +H SSS + HH S + HHH ++++ +H +H
Sbjct: 121 SIIIIIHHHHPSSSS--IIIIHHHHPSSSSIIIIHHHHHPSSSIIIIHHHH 169
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Frame = -2
Query: 425 SSREWSFLLFLHQEPQ----ISSSHQSLSFL---WHHRSQMHRCFLQHHHFQQANLLGLH 267
SS ++ +H P I H S S + HH S + HHH ++++ +H
Sbjct: 30 SSSSIIIIIIIHHHPSSSIIIHHHHPSSSIIIIHHHHPSSSSIIIIHHHHPSSSSIIIIH 89
Query: 266 RYH 258
+H
Sbjct: 90 HHH 92
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -2
Query: 410 SFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 258
S ++ H P SS + HH S + HHH ++++ +H +H
Sbjct: 58 SIIIIHHHHP---SSSSIIIIHHHHPSSSSIIIIHHHHPSSSSIIIIHHHH 105
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/51 (19%), Positives = 21/51 (41%)
Frame = -2
Query: 410 SFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 258
S ++ +H P H S + HH + HH ++++ + +H
Sbjct: 174 SIIIIIHHHPSSIIIHHPSSSIIHHHPSSSSIIIHHHPSSSSSIIIIIHHH 224
>SB_28099| Best HMM Match : SAP (HMM E-Value=0.8)
Length = 446
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 EPKESPVKKSPAKKVEAAE-SNGKRMVPMKPQKIRLLKMVMLKKATMH 326
EP + +K +K+ E S G+R+VP K +K+ L K + +KK ++
Sbjct: 22 EPDKKTLKAQLLQKIHTKEYSIGERIVPRKYEKLILTKDLKIKKEDVY 69
>SB_16760| Best HMM Match : OmpA (HMM E-Value=0.72)
Length = 933
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 EPKESPVKKSPAKKVEAAE-SNGKRMVPMKPQKIRLLKMVMLKKATMH 326
EP + +K +K+ E S G+R+VP K +K+ L K + +KK ++
Sbjct: 383 EPDKKTLKAQLLQKIHTKEYSIGERIVPRKYEKLILTKDLKIKKEDVY 430
>SB_15796| Best HMM Match : RVT_1 (HMM E-Value=0.00082)
Length = 1304
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 EPKESPVKKSPAKKVEAAE-SNGKRMVPMKPQKIRLLKMVMLKKATMH 326
EP + +K +K+ E S G+R+VP K +K+ L K + +KK ++
Sbjct: 730 EPDKKTLKAQLLQKIHTKEYSIGERIVPRKYEKLILTKDLKIKKEDVY 777
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 135 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQ 278
D DK E PE+ +P+ P KK AK + E + M KP+
Sbjct: 150 DKPEDKPEDKPEDKLEGKPENKPEKKPKAKSEDKPEDMPEDMPEDKPE 197
>SB_47181| Best HMM Match : Pkinase (HMM E-Value=7.7e-31)
Length = 801
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 251 QKNGTDEAPEDSPAENGDAEESNDASENG--DATEKKETGVKRKSV 382
+KN E E+ P GDA E D + G +++ GVK+++V
Sbjct: 173 KKNNETELQEEEPPSVGDAMECKDKEKKGRKKLQPRQKIGVKKRNV 218
>SB_38258| Best HMM Match : Sec7 (HMM E-Value=5.1e-22)
Length = 237
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 341 HHRSQMHRCFLQHHHFQQANLLGLHRYHSF 252
HH H HHH+ +L+ H +HSF
Sbjct: 171 HHYYHHHLLHHHHHHWHHHHLIIRHHHHSF 200
>SB_37086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 120 LATMADAAVDK-KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKIRL 290
L +AA++K +E +E+ K + V S E + G+ +VP+ P+K RL
Sbjct: 480 LVKKQEAAIEKIREKRRKELEDVHEKVTAVYASEGALSEPTRTKGQFLVPLPPKKARL 537
>SB_32384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 171 EVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKIRLLKMVML 308
+ + P+ S ++PA+ V S+G +V +KPQK K+V L
Sbjct: 249 QTNAVYPEASQQDQAPAQHVAKPVSDGLPVVEVKPQKTMHFKLVKL 294
>SB_3888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 986
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 153 KEVAPEEVTSTEPKES--PVKKSPAKKVEAAESNGKRMVPMKPQKIR 287
K V+PEE+ S +PK + P K P + + K+ P P K +
Sbjct: 758 KLVSPEELKSKKPKPAPPPSPKKPVSSKKVPTAAAKKAAPASPAKAK 804
>SB_37780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 147 DKKEVAPEEVTSTEPKESPVK--KSPAKKVEAAESNGKRMVPMKPQKI 284
D + AP VTS+ P + P+K K+ + +AA SN + V K +++
Sbjct: 116 DVTQSAPTRVTSSLPSKQPIKSSKTSRSQTKAAPSNARLNVGGKGKRL 163
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
EA E A E G+A E+ +ASE G+A E E G
Sbjct: 50 EASEAGEASEAGEASEAGEASEAGEAGEASEAG 82
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
EA E A E G+A E+ +ASE G+A+E E G
Sbjct: 194 EAVEAGEASEAGEASEAGEASEAGEASEAGEAG 226
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
EA E A E G+A E+ +ASE G+A E E G
Sbjct: 200 EASEAGEASEAGEASEAGEASEAGEAGEASEAG 232
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKETGV 367
EA E S A E G+A E+ +ASE G A+E E V
Sbjct: 215 EAGEASEAGEAGEASEAGEASEAGKASEAGEASV 248
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +2
Query: 251 QKNGTDEAPEDSPA----ENGDAEESNDASENGDATEKKETG 364
+ G EA E S A E G+A E+ ASE G+A E E G
Sbjct: 532 EAGGASEAGEASEAGGASEAGEASEAGGASEAGEAIEAGEDG 573
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKE 358
EA E S A E G+A E+ +ASE G+A E E
Sbjct: 344 EAGEASKASEAGEASEAGEASEAGEAGEASE 374
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 266 DEAPEDSP--AENGDAEESNDASENGDATEKKETGV 367
D+ EDS AEN D +E NDA ++ + E+ + V
Sbjct: 30 DKETEDSDPGAENDDEQEKNDADDSDEVKEEDDVSV 65
>SB_39187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 266 DEAPEDSPAENGDAEESNDASENGDATE 349
D+ +D ENGD +E++D +EN D E
Sbjct: 57 DKNDDDDDDENGDDDENDDDNENDDDDE 84
>SB_30368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 260 GTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
G EA E S A G+A E+++ASE G+A+E E
Sbjct: 30 GASEAGEASEA--GEASEASEASEAGEASEAGE 60
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 269 EAPEDSPA-ENGDAEESNDASENGDATEKKETG 364
EA E S A E G+A E+ +ASE G+ E E G
Sbjct: 42 EASEASEASEAGEASEAGEASEAGEVGEAGEAG 74
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +2
Query: 251 QKNGTDEAPEDSPAENGDAEESNDASENGDATEKKET 361
+ NG+DE+ E E+ +++ESN + E+ ++ E E+
Sbjct: 205 ESNGSDESNESD--ESNESDESNGSDESNESDESNES 239
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 251 QKNGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKS 379
+ NG+DE+ E E+ ++ESN + E+ ++ E E+ +S
Sbjct: 157 ESNGSDESNESD--ESNGSDESNGSDESNESDESNESDESNES 197
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = +2
Query: 251 QKNGTDEAPEDSPAENGDAEESNDASENGDATEKKET 361
+ NG+DE+ + E+ +++ESN++ E+ ++ E E+
Sbjct: 169 ESNGSDES--NGSDESNESDESNESDESNESDESNES 203
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = +2
Query: 251 QKNGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKS 379
+ NG+DE+ E E+ +++ESN++ E+ ++ E + +S
Sbjct: 175 ESNGSDESNESD--ESNESDESNESDESNESDESNGSDESNES 215
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 251 QKNGTDEAPE-DSPAENGDAEESNDASENGDATEKKETGV 367
+ NG+DE+ E D E+ ++ S+++ E+ ++ E E+G+
Sbjct: 223 ESNGSDESNESDESNESDESNGSDESYESDESDESNESGL 262
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 341 HHRSQMHRCFLQHHHFQQANLLGLHRYHSFAI 246
HH+ Q H QHHH QQ + H +H I
Sbjct: 243 HHQQQRHHHHEQHHHQQQQH----HHHHEHII 270
>SB_38251| Best HMM Match : fn3 (HMM E-Value=2.1e-05)
Length = 352
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 168 EEVTSTEPKESPVKKSPAKKVEAAESNGKRMVP 266
++V T KE P++ SP+KKV ++ + +P
Sbjct: 193 DQVVKTPIKEPPMETSPSKKVSEGQTTARIEIP 225
>SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11)
Length = 606
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 159 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKP 275
++ E+ ++EP+ +P KSPA+ A+ +P+ P
Sbjct: 565 LSSEKPEASEPEPAPEPKSPAENSTASNDTSTTAIPLPP 603
>SB_15280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 69
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 168 EEVTSTEPKESPVKKSPAKKVEAAESNGKRMVP 266
++V T KE P++ SP+KKV ++ + +P
Sbjct: 27 DQVVKTPIKEPPMETSPSKKVSEGQTTARIEIP 59
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +2
Query: 257 NGTDEAPEDSPAENG-DAEESNDAS----ENGDATEKKETGVKR 373
+GTDE EDS E+ D + SN AS E G EK +T ++R
Sbjct: 1548 DGTDEKTEDSMQEDAKDLDSSNTASDTTKEKGKNKEKDKTVLER 1591
>SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5)
Length = 260
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -2
Query: 392 HQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYH 258
HQ S S S HH+ Q HR QHHH Q + H++H
Sbjct: 73 HQLQYSVYSVSSASLQHHHQRQRHR-HHQHHH--QLQYIQCHQHH 114
>SB_42367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 254 KNGTDEAPEDSPAENGDAEES--NDASENGDATEKKET 361
K T + P DS E+G+ EE N+ E G+ +ET
Sbjct: 20 KEDTPKKPADSSKEDGELEEGELNEEGEEGEILSDEET 57
>SB_24428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 398 FLHQEPQISSSHQSLSFLWHHRSQMHRCF 312
FL + ISSS + LW +RS+ HR F
Sbjct: 398 FLKESGWISSSRFCVVHLWRNRSERHRFF 426
>SB_10354| Best HMM Match : AT_hook (HMM E-Value=0.045)
Length = 191
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Frame = +2
Query: 269 EAPEDSPAENG-----DAEESNDASENGD--ATEKKETGVKRKS 379
EAPE+ PAE+ + E+ DAS++G+ A +K+ G +K+
Sbjct: 70 EAPEEKPAEDSKDQAVEESETKDASKDGEGNAADKRARGRPKKA 113
>SB_53502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 120 LATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGK 254
+ MAD E P E T T E+ K+P+ E E G+
Sbjct: 32 IQNMADEEGKATEATPPEATETPAAEAAPAKAPSADAEVQEEAGE 76
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 317 NDASENGDATEKKETGVKRKSV 382
+D SEN DAT+ ETG K + V
Sbjct: 738 SDQSENNDATDGSETGDKNQEV 759
>SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043)
Length = 811
Score = 27.9 bits (59), Expect = 8.5
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 138 AAVDKKEVAP-EEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKIRLLKMVMLKK 314
A +D++ AP E+ S+ P+ KK A K E E+ MV + P+K R K L+
Sbjct: 660 ATIDEELGAPLTEMISSLPR----KKPRAAKDEELETPLTEMVYLPPKKTRATKDEELEV 715
Query: 315 ATMHLRTVMPQKRKR 359
+ + +P +KR
Sbjct: 716 PLTEMISPLPPNKKR 730
>SB_385| Best HMM Match : SRP54_N (HMM E-Value=1.1)
Length = 210
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 132 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKIRL 290
AD KK+ A + S E +S K+PAKK E + + K KP +++
Sbjct: 62 ADEPPKKKKKAESKPKSAEKSKSSKSKTPAKK-ETKKESKKSPKKSKPVTVKI 113
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 141 AVDKKEVAPEEVTSTEPKESPVKKSPAKKV-EAAESNGKRMV 263
++D+K + E S +P SPV+K P E+AE +R V
Sbjct: 107 SIDRKRRSSYESPSPQPFPSPVRKPPEPMTEESAEEKDQRTV 148
>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 594
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -2
Query: 422 SREWSFLLFLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHR 264
SR S + H+ P+ H L H + H C++ H F+ L LH+
Sbjct: 143 SRLQSTVTGKHERPESQPFHLELHNRVHVEYRPHACWMCHKAFKHKTALVLHK 195
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,511,569
Number of Sequences: 59808
Number of extensions: 317952
Number of successful extensions: 1761
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1694
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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