Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021166
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 33 0.15
U53332-1|AAK31529.2| 580|Caenorhabditis elegans Hypothetical pr... 33 0.20
DQ178637-1|ABD75716.1| 580|Caenorhabditis elegans F59G1.4 protein. 33 0.20
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z92803-7|CAB07244.1| 445|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41534-4|AAB47596.1| 323|Caenorhabditis elegans Hypothetical pr... 29 3.2
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 29 3.2
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 29 3.2
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 29 3.2
AF016684-4|AAB66208.1| 159|Caenorhabditis elegans Hypothetical ... 29 3.2
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 29 4.3
U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeo... 29 4.3
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 4.3
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 4.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 4.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 4.3
AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin p... 29 4.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 4.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 4.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 4.3
Z81131-4|CAD01083.1| 415|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z78012-5|CAB01415.1| 590|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 28 5.7
AF098991-1|AAC67449.2| 758|Caenorhabditis elegans Hypothetical ... 28 5.7
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 28 5.7
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 28 5.7
Z68880-9|CAA93099.1| 255|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68879-12|CAA93091.1| 255|Caenorhabditis elegans Hypothetical p... 28 7.5
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 27 9.9
U58757-11|AAC47916.1| 62|Caenorhabditis elegans Histone h1 lik... 27 9.9
U39851-6|AAM81116.1| 965|Caenorhabditis elegans Proteasome regu... 27 9.9
AL021504-1|CAA16428.3| 325|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 251 QKNGTDEAPEDSPAENGD-AEESNDASENGDATEKKETGVKRKS 379
+ N E DSP + D +++S+DASEN ++E E K+K+
Sbjct: 36 EDNDEKEKAADSPESSSDQSDDSDDASENSSSSEPDEPAPKKKN 79
>U53332-1|AAK31529.2| 580|Caenorhabditis elegans Hypothetical
protein F59G1.4 protein.
Length = 580
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 129 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKI-RLLKMVM 305
++D AV+ K+ A +E+T + E KK +KVE + R + + +K LLK +
Sbjct: 426 LSDGAVEYKK-AQDEITRKKEDEENKKKKEKEKVEKEKMKALRHIQLTSRKAPSLLKKEL 484
Query: 306 LKKATMHL 329
+ +T HL
Sbjct: 485 SEPSTTHL 492
>DQ178637-1|ABD75716.1| 580|Caenorhabditis elegans F59G1.4 protein.
Length = 580
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 129 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKI-RLLKMVM 305
++D AV+ K+ A +E+T + E KK +KVE + R + + +K LLK +
Sbjct: 426 LSDGAVEYKK-AQDEITRKKEDEENKKKKEKEKVEKEKMKALRHIQLTSRKAPSLLKKEL 484
Query: 306 LKKATMHL 329
+ +T HL
Sbjct: 485 SEPSTTHL 492
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 126 TMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAA 239
T D + KK + +T+PK+ +K SPAKK E A
Sbjct: 1105 TSKDPKLSKKAPVEKPKPTTDPKDDKLKPSPAKKPEKA 1142
>Z92803-7|CAB07244.1| 445|Caenorhabditis elegans Hypothetical
protein K01G5.5 protein.
Length = 445
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 150 KKEVAPEEVTSTEPKESPVKKS-PAKKVEAAESN 248
KKEV EE E +E+P KKS +KK E+++S+
Sbjct: 410 KKEVKKEETPDEEEEEAPKKKSKKSKKQESSDSD 443
>U41534-4|AAB47596.1| 323|Caenorhabditis elegans Hypothetical
protein C16A3.6 protein.
Length = 323
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 135 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKR 257
D+ D +E E + EP + VKK P KK ++GK+
Sbjct: 258 DSDEDDEEGGDEPMEIEEPPKKKVKKEPKKKTGKKAADGKK 298
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 251 QKNGTDEAPED-SPAENGDAEESNDASENGDATEKKETG 364
+ N + P+D +P NG+A+ + A+ NG+ T +TG
Sbjct: 120 ESNSPEHLPKDKAPIMNGNAKNAPAANRNGNNTSTAKTG 158
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 251 QKNGTDEAPED-SPAENGDAEESNDASENGDATEKKETG 364
+ N + P+D +P NG+A+ + A+ NG+ T +TG
Sbjct: 317 ESNSPEHLPKDKAPIMNGNAKNAPAANRNGNNTSTAKTG 355
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/34 (29%), Positives = 24/34 (70%)
Frame = +2
Query: 257 NGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
NG +E+ + ++NG+ ++ +AS+NG+ ++ +E
Sbjct: 290 NG-EESDNEEASDNGEESDNGEASDNGEESDNEE 322
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 257 NGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
NG +E ++NGD ++ +AS+NG+ ++ +E
Sbjct: 218 NG-EERGNGEASDNGDESDNGEASDNGEESDNEE 250
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 257 NGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
NG DE+ ++NG+ ++ +AS+NG+ ++ E
Sbjct: 230 NG-DESDNGEASDNGEESDNEEASDNGEESDNGE 262
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 257 NGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
NG +E ++NGD ++ +AS+NG+ ++ +E
Sbjct: 266 NG-EERGNGEASDNGDESDNGEASDNGEESDNEE 298
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 257 NGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
NG DE+ ++NG+ ++ +AS+NG+ ++ E
Sbjct: 278 NG-DESDNGEASDNGEESDNEEASDNGEESDNGE 310
Score = 27.9 bits (59), Expect = 7.5
Identities = 8/31 (25%), Positives = 22/31 (70%)
Frame = +2
Query: 266 DEAPEDSPAENGDAEESNDASENGDATEKKE 358
+E+ + ++NG+A ++ + S+NG+ ++ +E
Sbjct: 160 EESDNEIESDNGEASDNGEESDNGEESDNEE 190
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 257 NGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
NG +E+ NG+A ++ D S+NG+A++ E
Sbjct: 212 NG-EESDNGEERGNGEASDNGDESDNGEASDNGE 244
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 257 NGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
NG +E+ NG+A ++ D S+NG+A++ E
Sbjct: 260 NG-EESDNGEERGNGEASDNGDESDNGEASDNGE 292
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +2
Query: 257 NGTDEAPEDSPAENGDAEESNDASENGDATEKKE 358
NG +E+ + ++NG+ ++ +AS+NG+ ++ E
Sbjct: 314 NG-EESDNEEASDNGEESDNGEASDNGEESDNGE 346
>AF016684-4|AAB66208.1| 159|Caenorhabditis elegans Hypothetical
protein F45C12.9 protein.
Length = 159
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 65 TRVLNFYSLFKLFHFFNLPCNNGR 136
T +LN+Y L LF+F+ + C +G+
Sbjct: 60 TCILNYYYLCNLFNFYGIVCEDGQ 83
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 251 QKNGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVA 385
+K+ DE +D+ E E + GD +KK+ G K+K A
Sbjct: 425 KKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAGEKKKKDA 469
>U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform b protein.
Length = 199
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 278 EDSPAENG-DAEESNDASENGDATEKKE 358
+ +P E G D EE ND+ +NG+ E++E
Sbjct: 12 KSNPVEEGNDFEEENDSEKNGEEDEEEE 39
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 147 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQK 281
+K +P + T E KE KSP KK ++ E P+K +K
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPEDVKSPVKKEK 1488
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 138 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKR 257
A+ KKE +PE+ E K SP +KSP K E +S K+
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 138 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN 248
A+ KKE +PE+ S K KSP KK ++ E +
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 123 ATMADAAVDKKEVAPEEVTSTEPKESPVK-KSPAKKVEAAESNGKRMVPMKPQKIRLLKM 299
AT DKK+ E+T+ + + K ++ +K ++AAE K+ K K++L
Sbjct: 9556 ATSKQKETDKKQKLEAEITAKKSADEKSKLETESKLIKAAEDAAKKQ-KEKEDKLKLEAD 9614
Query: 300 VMLKKA 317
V KKA
Sbjct: 9615 VASKKA 9620
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 123 ATMADAAVDKKEVAPEEVTSTEPKESPVK-KSPAKKVEAAESNGKRMVPMKPQKIRLLKM 299
AT DKK+ E+T+ + + K ++ +K ++AAE K+ K K++L
Sbjct: 9576 ATSKQKETDKKQKLEAEITAKKSADEKSKLETESKLIKAAEDAAKKQ-KEKEDKLKLEAD 9634
Query: 300 VMLKKA 317
V KKA
Sbjct: 9635 VASKKA 9640
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 123 ATMADAAVDKKEVAPEEVTSTEPKESPVK-KSPAKKVEAAESNGKRMVPMKPQKIRLLKM 299
AT DKK+ E+T+ + + K ++ +K ++AAE K+ K K++L
Sbjct: 9576 ATSKQKETDKKQKLEAEITAKKSADEKSKLETESKLIKAAEDAAKKQ-KEKEDKLKLEAD 9634
Query: 300 VMLKKA 317
V KKA
Sbjct: 9635 VASKKA 9640
>AF003383-3|ABO16467.1| 438|Caenorhabditis elegans Cyclophylin
protein 17 protein.
Length = 438
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +3
Query: 126 TMADAAVDKKEVAPEE---VTSTEPKESPVKK 212
TMA V ++EV PEE +T+T K PVKK
Sbjct: 232 TMAPEEVPEEEVIPEEEEEITTTTRKTRPVKK 263
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 147 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQK 281
+K +P + T E KE KSP KK ++ E P+K +K
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPEDVKSPVKKEK 1488
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 138 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKR 257
A+ KKE +PE+ E K SP +KSP K E +S K+
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 138 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN 248
A+ KKE +PE+ S K KSP KK ++ E +
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 147 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQK 281
+K +P + T E KE KSP KK ++ E P+K +K
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPEDVKSPVKKEK 1488
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 138 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKR 257
A+ KKE +PE+ E K SP +KSP K E +S K+
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 138 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN 248
A+ KKE +PE+ S K KSP KK ++ E +
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 147 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQK 281
+K +P + T E KE KSP KK ++ E P+K +K
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPEDVKSPVKKEK 1488
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 138 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKR 257
A+ KKE +PE+ E K SP +KSP K E +S K+
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 138 AAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESN 248
A+ KKE +PE+ S K KSP KK ++ E +
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
>Z81131-4|CAD01083.1| 415|Caenorhabditis elegans Hypothetical
protein T24D1.5 protein.
Length = 415
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 263 TDEAPEDSPAENGDAEESNDA-SENGDATEKKETG 364
TDE +DS ++ D EES+D+ S N A TG
Sbjct: 202 TDEEEDDSDMDDEDEEESDDSNSPNSAAAVASHTG 236
>Z78012-5|CAB01415.1| 590|Caenorhabditis elegans Hypothetical
protein C52E4.5 protein.
Length = 590
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 165 PEEVTSTEPKESPVKKSPAKKVEAAE 242
P E TSTEP+E+ V K+P + E E
Sbjct: 96 PGEKTSTEPEETGVGKAPIQTSEGLE 121
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 165 PEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQK 281
P T T ++PV K+PA K A ++ G + VP ++
Sbjct: 72 PAPKTPTRAAKTPVVKTPAAKTPAKKAPGVQTVPSSDEE 110
>AF098991-1|AAC67449.2| 758|Caenorhabditis elegans Hypothetical
protein F59H5.1 protein.
Length = 758
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 135 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKIRLLKMVM 305
D A ++E EEV S EP ESP +P ++ G + K + ++L + V+
Sbjct: 34 DNADFEREDDEEEVLS-EPSESPYTSTPKSSKRVNKTRGTKDFFKKDESLQLFRFVL 89
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = -2
Query: 398 FLHQEPQISSSHQSLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYHSFAITFCSFN 228
F+ S+ S + + H + HHH +LL L+ +HS + SFN
Sbjct: 220 FMSSAASSSTPSTSSAPQMNQNQNTHPNSINHHHQPDTSLLMLNNHHSSPLNQLSFN 276
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +3
Query: 153 KEVAPEEVTSTEPKESP---VKKSPAKKVEAAESNGK 254
K+ P EV + P SP + KSP +V A E NGK
Sbjct: 119 KKNIPVEVVNVNPDRSPNWYLPKSPIGRVPALEINGK 155
>Z68880-9|CAA93099.1| 255|Caenorhabditis elegans Hypothetical
protein K08F4.9 protein.
Length = 255
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 253 LPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAAS 134
LPLL A++ ++GD LT D V + S A+ L+ S
Sbjct: 127 LPLLQKAASHVSGDSLTPDRAAIVNIGSDCASQALNLRGS 166
>Z68879-12|CAA93091.1| 255|Caenorhabditis elegans Hypothetical
protein K08F4.9 protein.
Length = 255
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 253 LPLLSAASTFLAGDFLTGDSFGSVEVTSSGATSFLSTAAS 134
LPLL A++ ++GD LT D V + S A+ L+ S
Sbjct: 127 LPLLQKAASHVSGDSLTPDRAAIVNIGSDCASQALNLRGS 166
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 251 QKNGTDEAPED-SPAENGDAEESNDASENGDATEKKETGVKRKSVALD 391
+KN D E SP +D S+ +T KK+ KR VA+D
Sbjct: 722 KKNEKDVKVESPSPIRKKKLPSDSDESDEETSTNKKQPAKKRSRVAID 769
>U58757-11|AAC47916.1| 62|Caenorhabditis elegans Histone h1 like
protein 7, isoforma protein.
Length = 62
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 138 AAVDK-KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKRMVPMKPQKIRLLKMVMLKK 314
AAV K K+VA + + +PK VKK A +AA K+ V K K KK
Sbjct: 2 AAVQKAKKVAKTKKVAAKPKAPKVKKIQASPKKAAAPKAKKPVKKAAAKKSPAKKAAPKK 61
>U39851-6|AAM81116.1| 965|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 2, isoform b
protein.
Length = 965
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 150 KKEVAPEEVTSTEPK-ESPVKKSPAKKVEAAESNGKRMVPMKP 275
KKE APE+ T + ++P + PA++ + S+ + PMKP
Sbjct: 871 KKEKAPEKDTKPLHRLQNPARVIPAQRQLISISDARAYSPMKP 913
>AL021504-1|CAA16428.3| 325|Caenorhabditis elegans Hypothetical
protein Y61B8B.1 protein.
Length = 325
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = -2
Query: 359 SLSFLWHHRSQMHRCFLQHHHFQQANLLGLHRYHSFAITFCSFNFLSW 216
SL+F+++ + CF Q H + A+++ +H +AI S FL++
Sbjct: 98 SLTFIYYESECLALCFFQKHQ-KIASVIDVHVIPRYAIIIGSLIFLAF 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,298,917
Number of Sequences: 27780
Number of extensions: 248810
Number of successful extensions: 1448
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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