Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021165
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   2.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   3.7  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -3

Query: 118 QNKIDISSI*QRQHRAGSSRSTAVS--YAKPEIDRENRH 8
           Q K+ +  + +++ R      TA    YAK   D+ENRH
Sbjct: 464 QRKLLLGQMVEKEVRERREADTAAELRYAKEHADKENRH 502


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 114  TKSISHLFSNGNTEPVARGL-PQCRTLSRRSTV 19
            T + +H+ +NG+  PV+ G  PQ    ++R+T+
Sbjct: 1216 TSNEAHVIANGHDGPVSAGKPPQAPPKAKRTTL 1248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,945
Number of Sequences: 2352
Number of extensions: 11030
Number of successful extensions: 44
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)