Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021163
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 54 1e-07
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 45 6e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 45 6e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 45 6e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 45 6e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 45 6e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 45 6e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 45 6e-05
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 40 0.002
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 40 0.002
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 40 0.002
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 38 0.009
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 38 0.009
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 37 0.012
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 37 0.012
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.022
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 36 0.022
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 36 0.029
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 36 0.029
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 36 0.029
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 36 0.038
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 36 0.038
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.038
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 35 0.066
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 35 0.066
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.066
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 35 0.066
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.066
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.087
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.087
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 34 0.087
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 34 0.087
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 34 0.087
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 33 0.15
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.15
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 33 0.15
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 33 0.15
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 33 0.15
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 33 0.15
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.27
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 32 0.35
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 32 0.35
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 32 0.35
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 32 0.35
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 32 0.47
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 32 0.47
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 32 0.47
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 32 0.47
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 31 0.61
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.61
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 31 0.61
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.61
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 31 0.61
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 31 0.61
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 31 0.61
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 31 0.61
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.1
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 30 1.4
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 30 1.4
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.9
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.9
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 30 1.9
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 30 1.9
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 30 1.9
U50312-2|AAA92319.2| 477|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 2.5
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 29 3.3
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 29 3.3
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical ... 29 3.3
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 29 4.3
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 29 4.3
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 4.3
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 4.3
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 28 5.7
AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical ... 28 5.7
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 28 7.6
L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human nie... 28 7.6
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +2
Query: 353 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLD 478
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE 44
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQV 255
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E + V
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDV 48
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +1
Query: 508 KLNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRC 615
+L G +DG+ + ++ STS++R PGM P +C+RC
Sbjct: 54 RLTGYTIDGKVVNIKKSTSKLRPTPGM--PNRCFRC 87
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +2
Query: 353 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLD 478
+K+FVGNL D + +++++FQ F V ECDIV+NY FVH++
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE 44
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQV 255
K+F+GNL D L+ +F+ + V ECDIV+NY FVH+E + V
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDV 48
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +1
Query: 508 KLNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRC 615
+L G +DG+ + ++ STS++R PGM P +C+RC
Sbjct: 54 RLTGYTIDGKVVNIKKSTSKLRPTPGM--PNRCFRC 87
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDI--VRNYGFVHMENEQVA 258
+++GN+S +TT+ADLR LF YG + E I + Y FV E ++ A
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECA 285
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +1
Query: 118 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVAAN 264
F +F+G+LS + L+ F K+G V E ++R+ YGFV N+Q A N
Sbjct: 135 FHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAEN 191
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 353 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 478
T ++VGN++ +T ++R+LF +G + E I + Y FV +
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYE 280
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 85 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 314 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 85 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 314 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 85 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 314 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 85 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 314 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 85 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 314 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 85 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 314 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 85 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+P P T K+F+G + + E D R LFEKYG+V C+I+R+
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 314 EAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
+ + S P T K+FVG + + + R LF+K+G+V C+I+R+
Sbjct: 42 DVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
K+FIG LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
K+F+G L+ K +RE+F KFG + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 109 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVAANHS 270
TG ++F+GNL ++ E +L+ LF +G + EC + GF + AAN S
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-YLSGKGFAFLRLISNAANKS 165
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 332 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHL 475
K T ++FVGNL ++ + E++ELF G + EC + + + F+ L
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRL 157
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 109 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVAANHSES 276
TG ++F+GNL ++ E +L+ LF +G + EC + + + F+ ++ A + E+
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEA 169
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 332 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNDA 502
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESA 166
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 109 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVAANHSES 276
TG ++F+GNL ++ E +L+ LF +G + EC + + + F+ ++ A + E+
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEA 169
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 332 KAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNDA 502
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESA 166
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Frame = +2
Query: 260 RTIQNLNGELVHGQAIKIE-AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVV 436
R + +N E++HG+ ++I + + A IF+ NL V + F FG ++
Sbjct: 113 RALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNIL 172
Query: 437 ECDIV-------RNYGFVHLDATGDVNDAIK 508
C + + YGFVH + AI+
Sbjct: 173 SCKVATDDEGNSKGYGFVHFETEHSAQTAIE 203
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +1
Query: 85 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHME 243
+P ++ G G IFI NL + F +G ++ C + + YGFVH E
Sbjct: 136 DPAARRAGNGN--IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFE 193
Query: 244 NEQVA 258
E A
Sbjct: 194 TEHSA 198
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Frame = +2
Query: 260 RTIQNLNGELVHGQAIKIE-AAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVV 436
R + +N E++HG+ ++I + + A IF+ NL V + F FG ++
Sbjct: 113 RALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNIL 172
Query: 437 ECDIV-------RNYGFVHLDATGDVNDAIK 508
C + + YGFVH + AI+
Sbjct: 173 SCKVATDDEGNSKGYGFVHFETEHSAQTAIE 203
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +1
Query: 85 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHME 243
+P ++ G G IFI NL + F +G ++ C + + YGFVH E
Sbjct: 136 DPAARRAGNGN--IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFE 193
Query: 244 NEQVA 258
E A
Sbjct: 194 TEHSA 198
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNDAIKS 511
K++VGNL R EV ++F K+G + DI G FV + D DA+++
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRA 65
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +1
Query: 106 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVA 258
G+ K+++GNL E ++ +F KYG + DI G FV E+ + A
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDA 59
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNDAIKS 511
K++VGNL R EV ++F K+G + DI G FV + D DA+++
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRA 65
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +1
Query: 106 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVA 258
G+ K+++GNL E ++ +F KYG + DI G FV E+ + A
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDA 59
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Frame = +1
Query: 109 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVA 258
T T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++VA
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA 188
Score = 34.7 bits (76), Expect = 0.066
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 37.1 bits (82), Expect = 0.012
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Frame = +1
Query: 109 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVA 258
T T K+FIG LS +T D++ FE YG V + ++ R +GFV ++++VA
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVA 188
Score = 34.7 bits (76), Expect = 0.066
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 36.3 bits (80), Expect = 0.022
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAI 505
+I++G LT + ++ F+ +G + + + +GFV D D DA+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAV 53
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVA 258
+I+IG L+ + +E D+ F YG + + + +GFV ++++ A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDA 49
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 36.3 bits (80), Expect = 0.022
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAI 505
+I++G LT + ++ F+ +G + + + +GFV D D DA+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAV 53
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVA 258
+I+IG L+ + +E D+ F YG + + + +GFV ++++ A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDA 49
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 36.3 bits (80), Expect = 0.022
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAI 505
+I++G LT + ++ F+ +G + + + +GFV D D DA+
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAV 53
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVA 258
+I+IG L+ + +E D+ F YG + + + +GFV ++++ A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDA 49
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 36.3 bits (80), Expect = 0.022
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Frame = +2
Query: 314 EAAKSRKAPSTPTT-KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGF 466
E ++R P T +FVG+L + + ++RE F KFG V E I+R+ YGF
Sbjct: 118 EPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGF 177
Query: 467 VHLDATGDVNDAI 505
V D AI
Sbjct: 178 VSYPRREDAERAI 190
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 94 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
SK + F +F+G+L + LR F K+G V E I+R+
Sbjct: 124 SKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRD 166
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLDATGDVNDAIKS 511
K++VG L + E+ E+F +FG + + + R + FV D D DA+++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRA 58
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLDATGDVNDAIKS 511
K++VG L + E+ E+F +FG + + + R + FV D D DA+++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRA 58
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVR---NYGFVHLDATGDVNDAIKS 511
K++VG L + E+ E+F +FG + + + R + FV D D DA+++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRA 58
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +2
Query: 260 RTIQNLNGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVV 436
R + +N E +HG+ ++I ++ A + IF+ NL + + F FG ++
Sbjct: 88 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Query: 437 ECDIV-------RNYGFVHLDATGDVNDAIK 508
C + + YGFVH + +AI+
Sbjct: 148 SCKVAIDEDGFSKGYGFVHFETEEAAQNAIQ 178
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Frame = +1
Query: 100 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVA 258
M +G IFI NL + F +G ++ C + + YGFVH E E+ A
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 259 AN 264
N
Sbjct: 174 QN 175
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Frame = +2
Query: 266 IQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELFQKF 424
IQ +NG L+ G+ + + A ++R+ T T ++V N D + ++F KF
Sbjct: 177 IQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKF 236
Query: 425 GTVVECDIV------RNYGFVHLDATGDVNDAIKS 511
G + C+++ + +GFV + A+++
Sbjct: 237 GNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQA 271
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVA 258
+++ N D + L +F K+G + C+++ + +GFV N + A
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEA 265
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +2
Query: 260 RTIQNLNGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVV 436
R + +N E +HG+ ++I ++ A + IF+ NL + + F FG ++
Sbjct: 25 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 84
Query: 437 ECDIV-------RNYGFVHLDATGDVNDAIK 508
C + + YGFVH + +AI+
Sbjct: 85 SCKVAIDEDGFSKGYGFVHFETEEAAQNAIQ 115
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Frame = +1
Query: 100 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVA 258
M +G IFI NL + F +G ++ C + + YGFVH E E+ A
Sbjct: 51 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 110
Query: 259 AN 264
N
Sbjct: 111 QN 112
Score = 34.7 bits (76), Expect = 0.066
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Frame = +2
Query: 266 IQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELFQKF 424
IQ +NG L+ G+ + + A ++R+ T T ++V N D + +LF KF
Sbjct: 114 IQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKF 173
Query: 425 GTVVECDIV------RNYGFVHLDATGDVNDAIKS 511
G + C+++ + +GFV + A+++
Sbjct: 174 GNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQA 208
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVA 258
+++ N D + L LF K+G + C+++ + +GFV N + A
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEA 202
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 35.5 bits (78), Expect = 0.038
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +2
Query: 260 RTIQNLNGELVHGQAIKIEAAKSRKAPS-TPTTKIFVGNLTDKTRAPEVRELFQKFGTVV 436
R + +N E +HG+ ++I ++ A + IF+ NL + + F FG ++
Sbjct: 88 RAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Query: 437 ECDIV-------RNYGFVHLDATGDVNDAIK 508
C + + YGFVH + +AI+
Sbjct: 148 SCKVAIDEDGFSKGYGFVHFETEEAAQNAIQ 178
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Frame = +1
Query: 100 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV-------RNYGFVHMENEQVA 258
M +G IFI NL + F +G ++ C + + YGFVH E E+ A
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 259 AN 264
N
Sbjct: 174 QN 175
Score = 34.7 bits (76), Expect = 0.066
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Frame = +2
Query: 266 IQNLNGELVHGQAIKI-----EAAKSRKAPSTPT--TKIFVGNLTDKTRAPEVRELFQKF 424
IQ +NG L+ G+ + + A ++R+ T T ++V N D + +LF KF
Sbjct: 177 IQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKF 236
Query: 425 GTVVECDIV------RNYGFVHLDATGDVNDAIKS 511
G + C+++ + +GFV + A+++
Sbjct: 237 GNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQA 271
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVA 258
+++ N D + L LF K+G + C+++ + +GFV N + A
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEA 265
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.066
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 136 NLSDKTTEADLRPLFEKYGTVVECDIV 216
NLS TTE DLR +F ++G + +CD+V
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLV 108
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Frame = +2
Query: 347 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDA 502
P+ + V NL+ T ++R++F +FG + +CD+V R +GF++ + D A
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = +1
Query: 112 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVA 258
G ++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q A
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDA 205
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Frame = +2
Query: 317 AAKSRKAPSTPT-----TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YG 463
AA ++ PST + ++ V N+ + R P+++ +F+KFG V + +I+ N +G
Sbjct: 136 AAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFG 195
Query: 464 FVHLDATGDVNDA 502
FV ++ D A
Sbjct: 196 FVTMERPQDAERA 208
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.066
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVA 258
+IF+G TTE +LR FEK+ V + +V++ YGF+ E E A
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 119
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKS* 514
+IFVG T E+RE F+KF V + +V++ YGF+ + T D + I+
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE-TEDQAEEIRKL 125
Query: 515 T 517
T
Sbjct: 126 T 126
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Frame = +1
Query: 112 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVA 258
G ++ + N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q A
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDA 205
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Frame = +2
Query: 317 AAKSRKAPSTPT-----TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN------YG 463
AA ++ PST + ++ V N+ + R P+++ +F+KFG V + +I+ N +G
Sbjct: 136 AAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFG 195
Query: 464 FVHLDATGDVNDA 502
FV ++ D A
Sbjct: 196 FVTMERPQDAERA 208
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 34.7 bits (76), Expect = 0.066
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVA 258
+IF+G TTE +LR FEK+ V + +V++ YGF+ E E A
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQA 120
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKS* 514
+IFVG T E+RE F+KF V + +V++ YGF+ + T D + I+
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFE-TEDQAEEIRKL 126
Query: 515 T 517
T
Sbjct: 127 T 127
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.087
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-YGFVHMENEQVAANHSES*RRVSSW 297
K+F+G + E DLR LFE++G + E I+++ Y +H + H +S R +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 298 AGDQ 309
DQ
Sbjct: 90 LHDQ 93
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +2
Query: 299 QAIKIEAAKSRKAPSTPTTK-----IFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 454
+A++++ A + P++P K +F+G L+ + EVR LF FG + E ++R
Sbjct: 101 RAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLR 157
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.087
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN-YGFVHMENEQVAANHSES*RRVSSW 297
K+F+G + E DLR LFE++G + E I+++ Y +H + H +S R +
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 298 AGDQ 309
DQ
Sbjct: 90 LHDQ 93
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Frame = +2
Query: 299 QAIKIEAAKSRKAPSTPTTK-----IFVGNLTDKTRAPEVRELFQKFGTVVECDIVR 454
+A++++ A + P++P K +F+G L+ + EVR LF FG + E ++R
Sbjct: 101 RAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLR 157
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
K+FVG + ++R LF++FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.087
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 118 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 219
F++++ ++ +E DL+ +FE +G +V+C + R
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLAR 240
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.087
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 118 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 219
F++++ ++ +E DL+ +FE +G +V+C + R
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLAR 240
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 34.3 bits (75), Expect = 0.087
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 118 FKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 219
F++++ ++ +E DL+ +FE +G +V+C + R
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLAR 240
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIK 508
KIFVG LT T +RE + +FG + + ++R+ +GFV +V+ A+K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
KIF+G L+ TT+ +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 237
K+FIG LS TT+ L F ++G VV+ ++R+ H
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 88
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 237
K+FIG LS TT+ L F ++G VV+ ++R+ H
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 108
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVH 237
K+FIG LS TT+ L F ++G VV+ ++R+ H
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKH 109
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIK 508
KIFVG LT T +RE + +FG + + ++R+ +GFV +V+ A+K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
KIF+G L+ TT+ +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIK 508
KIFVG LT T +RE + +FG + + ++R+ +GFV +V+ A+K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
KIF+G L+ TT+ +R + ++G + + ++R+
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRD 57
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 115 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 216
T ++F+ NL T E DL+ LF+KYG V E +V
Sbjct: 278 TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = +1
Query: 115 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI-------VRNYGFVHMENEQVAAN 264
T ++ + NL TE LR FEKYG + + + R + FV +E A+N
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASN 58
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+F+ L+ TT+ DL +F ++G + C+IVR+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRD 275
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 347 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
P +FV L T ++ +F +FG + C+IVR+
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRD 275
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+F+ L+ TT+ DL +F ++G + C+IVR+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRD 275
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 347 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
P +FV L T ++ +F +FG + C+IVR+
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRD 275
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+F+ L+ TT+ DL +F ++G + C+IVR+
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRD 206
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 347 PTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRN 457
P +FV L T ++ +F +FG + C+IVR+
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRD 206
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVR 219
KI + N+S K T++ L+ F +YG + C + R
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 32.3 bits (70), Expect = 0.35
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 257 PRTIQNLNGELVHGQAIKIEAAKSRKAPSTPTTK--IFVGNLTDKTRAPEVRELFQKFGT 430
P T + G H Q + A+ + P + T +FV NL+ T + +LF +FG
Sbjct: 340 PATNGQVAGLAAHAQLSALSASVAATLPPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGA 399
Query: 431 VVECDIVRN 457
+V I+R+
Sbjct: 400 IVNVKILRD 408
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 115 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 213
T +F+GN+ E ++R +FE++G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 350 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 448
T +FVGN+ + E+R +F++ G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 115 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 213
T +F+GN+ E ++R +FE++G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 350 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 448
T +FVGN+ + E+R +F++ G V E DI
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 115 TFKIFIGNLSDKTTEADLRPLFEKYGTVVECDI 213
T +F+GN+ E ++R +FE++G V E DI
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 177
Score = 31.9 bits (69), Expect = 0.47
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 350 TTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI 448
T +FVGN+ + E+R +F++ G V E DI
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI 177
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 112 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
G + I NLS +TT DLR FE+YG + + I R+
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRD 53
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 112 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
G + I NLS +TT DLR FE+YG + + I R+
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRD 53
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 31.9 bits (69), Expect = 0.47
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -2
Query: 685 IAETVAVGAQRFGHSFGPVAPRGHSGSTARGRPCPAA 575
+AE A+ + G P AP + ARGRP PAA
Sbjct: 21 LAELAAIQEEEMGRVSRPAAPARGAPPAARGRPAPAA 57
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.47
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Frame = +2
Query: 344 TPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVND 499
T TKIFVG L T + E F++FG + E ++ R YGFV +
Sbjct: 32 TMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAER 91
Query: 500 AIK 508
A K
Sbjct: 92 ACK 94
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVA 258
KIF+G L T++ L FE++G + E ++ R YGFV M++ A
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASA 89
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 31.5 bits (68), Expect = 0.61
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Frame = +1
Query: 103 PGTGTFK-IFIGNLSDKTTEADLRPLFE-----KYGTVVECDIV-RNYGFVHMENEQVA 258
PGT + IF+ NL TTE ++R E ++ D+V R + +V MEN+Q A
Sbjct: 587 PGTEDARTIFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMENDQKA 645
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTV 198
K+F+ N+ + T+ +L+ LF K+GTV
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTV 709
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 353 TKIFVGNLTDKTRAPEVRELFQKFGTV 433
+K+FV N+ + E++ LF KFGTV
Sbjct: 683 SKVFVRNVHFQATDDELKALFSKFGTV 709
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.5 bits (68), Expect = 0.61
Identities = 11/46 (23%), Positives = 27/46 (58%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVA 258
+++IG L ++ ++ D+ F YG + + + +GFV ++++ A
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDA 48
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/50 (22%), Positives = 26/50 (52%)
Frame = +2
Query: 356 KIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAI 505
++++G L ++ +V F+ +G + + + +GFV D +DA+
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAV 52
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 341 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 478
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D
Sbjct: 124 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFD 170
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 341 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 478
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D
Sbjct: 134 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFD 180
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 341 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 478
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D
Sbjct: 237 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFD 283
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 31.5 bits (68), Expect = 0.61
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 341 STPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDI--VRNYGFVHLD 478
S T ++VGN+ T E+R+ F FG + E I ++ Y FV D
Sbjct: 205 SGDNTSVYVGNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFD 251
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECD--------IVRNYGFVHMENEQVA 258
K+F+G L +E DLR FE++G V + + RN+ F+ E E+ A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESA 164
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 284 ELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 433
+ + G++++++ AKSR+ K+FVG L ++R F++FG V
Sbjct: 92 QTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI 213
KIF+G +S + DL F +YG V + +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQV 60
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECD--------IVRNYGFVHMENEQVA 258
K+F+G L +E DLR FE++G V + + RN+ F+ E E+ A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESA 164
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 284 ELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 433
+ + G++++++ AKSR+ K+FVG L ++R F++FG V
Sbjct: 92 QTIKGKSVEVKPAKSRE-----NKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 121 KIFIGNLSDKTTEADLRPLFEKYGTVVECDI 213
KIF+G +S + DL F +YG V + +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQV 60
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 266 IQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 439
I+ LN ++G+ IK+ A + + IFVGNL + + + F FG +++
Sbjct: 71 IKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -3
Query: 699 RPNARSRKPLRSGPSASGTPLDQWPPAATAVALLGVAHARPLP 571
+P+ S P+ SG S+ TP PP T V G+A ARP P
Sbjct: 536 KPSFPSSAPIGSGASSYSTPAA--PPPPTRVESHGLAPARPPP 576
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -3
Query: 699 RPNARSRKPLRSGPSASGTPLDQWPPAATAVALLGVAHARPLP 571
+P+ S P+ SG S+ TP PP T V G+A ARP P
Sbjct: 362 KPSFPSSAPIGSGASSYSTPAA--PPPPTRVESHGLAPARPPP 402
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 266 IQNLNGELVHGQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVE 439
I+ LN ++G+ IK+ A + + IFVGNL + + + F FG +++
Sbjct: 81 IKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 138
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVA 258
+F+GN+S +E +R +F K G V+ +V + YGF+ + Q A
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTA 72
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
I+IG LS +E D+ +F +YG V+ +++R+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRD 72
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVA 258
+++ N D + L LF K+G + C+++ + +GFV N + A
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEA 205
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +2
Query: 353 TKIFVGNLTDKTRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNDAIKS 511
T ++V N D + +LF KFG + C+++ + +GFV + A+++
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQA 211
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 359 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 466
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 359 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 466
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 29.9 bits (64), Expect = 1.9
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +2
Query: 32 LVFIFLTCVIYCYSLYIVTHNLKCR 106
L+F F++C ++ Y++Y+V H + +
Sbjct: 104 LIFFFISCTMFLYAVYLVKHETELK 128
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 359 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 466
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 107 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 144
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 359 IFVGNLTDKTRAPEVRELFQKFGTV--VECDIVRNYGF 466
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>U50312-2|AAA92319.2| 477|Caenorhabditis elegans Hypothetical
protein B0222.2 protein.
Length = 477
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 308 KIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATG 487
K++ + RK PS K +V L D+TR + R + + F T ++ GF H
Sbjct: 278 KLQNVQQRKTPSGKIRKFYVWLLPDRTRV-DGRNITKLFST-IQVFTACFAGFAH--GAN 333
Query: 488 DVNDAI 505
DV++AI
Sbjct: 334 DVSNAI 339
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/50 (20%), Positives = 28/50 (56%)
Frame = +2
Query: 359 IFVGNLTDKTRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIK 508
+++ N+ + ++ ELF+++ ++ V++Y F+H + D A++
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAME 428
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 287 LVHGQAIKIEAAKSRKAPSTPT-TKIFVGNLTDKTRAPEVRELF 415
++ G+ ++ R P+ ++IFVG LTDK ++R++F
Sbjct: 236 MIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVF 279
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +3
Query: 558 DESCPAAAGHGRPRAVLPLWPRGATGPKECPKRWAPTATVSAIERSAAIPT 710
D+SCP + P P+ P T P CP APT T A+ S PT
Sbjct: 397 DQSCPKPS----PTDPTPVPPVAPTPPSVCPTTVAPT-TTPALLTSTIAPT 442
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +3
Query: 558 DESCPAAAGHGRPRAVLPLWPRGATGPKECPKRWAPTATVSAIERSAAIPT 710
D+SCP + P P+ P T P CP APT T A+ S PT
Sbjct: 400 DQSCPKPS----PTDPTPVPPVAPTPPSVCPTTVAPT-TTPALLTSTIAPT 445
>AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical
protein Y52D5A.1 protein.
Length = 914
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 43 IFNLCYILLFFVHSNP*SKMPGTGTFKI-FIGNL 141
IF+L I +F SN K+P +GTF + +IGN+
Sbjct: 615 IFDLPVIYIFLKMSNSIFKLPASGTFVLMYIGNV 648
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Frame = +1
Query: 118 FKIFIGNLSDKTTEADLRPLFEKYGTV----VECD--IVRNYGFVHME-NEQVAANHS 270
F +++GN +TTE DL F + G V + CD R GF +E E+ AA +
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRA 61
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTVVECDIVRN 222
+F+G ++ +T+E+ LR FE YG + + +V +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHD 138
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -2
Query: 670 AVGAQRFGHSFGPVAPRGHSGSTARGRPCPAAAGHDSSTTAPSWAVRRPSYRS 512
AVGA + S GP+ ++ P G+++ +AP V++ Y+S
Sbjct: 139 AVGASSYARSQGPIGGGPSYAGASQPAPVAPQGGYNAGPSAPVEQVQQGGYQS 191
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -2
Query: 670 AVGAQRFGHSFGPVAPRGHSGSTARGRPCPAAAGHDSSTTAPSWAVRRPSYRS 512
AVGA + S GP+ ++ P G+++ +AP V++ Y+S
Sbjct: 139 AVGASSYARSQGPIGGGPSYAGASQPAPVAPQGGYNAGPSAPVEQVQQGGYQS 191
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 109 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVECDIV 216
+G F +++GN +TTE +L F G + IV
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIV 37
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 296 GQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 433
GQ + + +K S+P +FVGN++DK +R++ + G V
Sbjct: 31 GQHTPAQQSSQQKPDSSP---VFVGNISDKCSDEFIRKILNECGNV 73
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 296 GQAIKIEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 433
GQ + + +K S+P +FVGN++DK +R++ + G V
Sbjct: 31 GQHTPAQQSSQQKPDSSP---VFVGNISDKCSDEFIRKILNECGNV 73
>AL032643-6|CAA21657.1| 538|Caenorhabditis elegans Hypothetical
protein Y54E5A.4 protein.
Length = 538
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -2
Query: 676 TVAVGAQRFGHSFGPVAPRGHSG--STARGRPCPAAAGHDSSTTAPS 542
+ A A + G FG A SG ++ P PA+AG STTAP+
Sbjct: 21 STAAAAPKPGGLFGAPAAAMSSGLFGASQTAPAPASAGLFGSTTAPT 67
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 311 IEAAKSRKAPSTPTTKIFVGNLTDKTRAPEVRELFQKFGTV 433
++ + +R + + +FVGN+ VR +F FGT+
Sbjct: 129 LQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTI 169
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 124 IFIGNLSDKTTEADLRPLFEKYGTV--VECDIVRNYGFV 234
+F+ N+ ++ TE D+ F +YG + + ++ R GF+
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFL 95
>L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human
niemann pick c disease)related protein 2 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 1 VYCVGNSWSLFGVHIFNLCYILLFFV 78
V+C +SLFGVH + ++LFFV
Sbjct: 638 VWCSIGMFSLFGVHATDNAIVVLFFV 663
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,067,080
Number of Sequences: 27780
Number of extensions: 389425
Number of successful extensions: 1527
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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