Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021162
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 127 1e-29
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 120 1e-27
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 116 2e-26
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 78 6e-15
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 78 6e-15
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 73 2e-13
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 71 7e-13
U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 69 5e-12
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 69 5e-12
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 62 3e-10
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 60 2e-09
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 58 7e-09
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 58 1e-08
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z99710-5|CAB16866.1| 662|Caenorhabditis elegans Hypothetical pr... 39 0.004
U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical pr... 36 0.025
AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical ... 31 1.3
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 2.9
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 2.9
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 28 8.9
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 28 8.9
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 28 8.9
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 28 8.9
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 127 bits (306), Expect = 1e-29
Identities = 55/83 (66%), Positives = 69/83 (83%)
Frame = +3
Query: 513 ASGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWI 692
A+ L TP+I+ N + +K++LGR+ID P VA+Y VTEPGAGSDVAG+KT+ EKKGDE+I
Sbjct: 112 ANDLALTPLILCANDDIKKRFLGRMIDNPFVASYAVTEPGAGSDVAGVKTKCEKKGDEYI 171
Query: 693 LNGPKMWITNGGVANWYFVLART 761
LNG KMWITN G ANW+FVLAR+
Sbjct: 172 LNGSKMWITNAGHANWFFVLARS 194
Score = 99 bits (238), Expect = 2e-21
Identities = 45/97 (46%), Positives = 62/97 (63%)
Frame = +1
Query: 256 FELTDEQKALQELARKFTKDEIXXVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGM 435
F+LT +Q + RKF DE+ VAG+YDKT EYPW ++KKA G + IPE GG+
Sbjct: 26 FQLTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPEAYGGL 85
Query: 436 DMGVFDGCLVAEELAYGCTGIMTARKPVDLAKLPSLL 546
+ + C+++EE+AYGC+GI TA DLA P +L
Sbjct: 86 GVDMVSNCIISEEMAYGCSGIATAIMANDLALTPLIL 122
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 120 bits (289), Expect = 1e-27
Identities = 53/80 (66%), Positives = 65/80 (81%)
Frame = +3
Query: 522 LGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNG 701
L PV I+GN+EQ+KKYLG L EP++A+Y VTEPGAGSDV G+KT+ EKKGDE+I+NG
Sbjct: 118 LAIAPVYISGNEEQKKKYLGALAAEPIIASYCVTEPGAGSDVNGVKTKCEKKGDEYIING 177
Query: 702 PKMWITNGGVANWYFVLART 761
K WIT GG A W+FVLAR+
Sbjct: 178 SKAWITGGGHAKWFFVLARS 197
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/102 (40%), Positives = 62/102 (60%)
Frame = +1
Query: 232 ANTDNRLFFELTDEQKALQELARKFTKDEIXXVAGQYDKTGEYPWPVVKKAWEVGLMNGH 411
A ++ F+L++ QK +Q+ A KF+KD + A ++D++GE+PW +V++A +GLMN
Sbjct: 21 ATQSRQISFDLSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQ 80
Query: 412 IPEHCGGMDMGVFDGCLVAEELAYGCTGIMTARKPVDLAKLP 537
IPE GG M + L+ E L+YGCTGI LA P
Sbjct: 81 IPEKYGGPGMTTLETALIVEALSYGCTGIQLGIMGPSLAIAP 122
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 116 bits (279), Expect = 2e-26
Identities = 50/80 (62%), Positives = 64/80 (80%)
Frame = +3
Query: 522 LGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNG 701
L P+ ++G +EQ+KKYLG L EP++A+Y VTEPGAGSDV G+KT+A K+GDE+I+NG
Sbjct: 112 LAAAPICLSGTEEQKKKYLGMLAAEPIIASYCVTEPGAGSDVNGVKTKAVKQGDEYIING 171
Query: 702 PKMWITNGGVANWYFVLART 761
K WIT GG A W+FVLART
Sbjct: 172 SKAWITGGGHAKWFFVLART 191
Score = 89.4 bits (212), Expect = 3e-18
Identities = 43/100 (43%), Positives = 61/100 (61%)
Frame = +1
Query: 247 RLFFELTDEQKALQELARKFTKDEIXXVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHC 426
++ FEL+D QK +Q A KF+KD + A ++DK+GE+PW +VK+A +G MN IPE
Sbjct: 20 QMSFELSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKY 79
Query: 427 GGMDMGVFDGCLVAEELAYGCTGIMTARKPVDLAKLPSLL 546
GG + D L+ E L+YGC+G+ A LA P L
Sbjct: 80 GGPGLSNLDTALIVEALSYGCSGLQIAIFGPSLAAAPICL 119
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 78.2 bits (184), Expect = 6e-15
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = +3
Query: 516 SGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWIL 695
S L ++ G++EQ+KKYL +LI + A ++E AGSDV +K RAEKKGD+++L
Sbjct: 127 SNLCINQIVRNGSEEQRKKYLPKLISGEHMGALAMSEAQAGSDVVSMKLRAEKKGDKYVL 186
Query: 696 NGPKMWITNGGVANWYFVLART 761
NG K WITNG A+ V A+T
Sbjct: 187 NGTKFWITNGPDADVLVVYAKT 208
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 256 FELTDEQKALQELARKFTKDEIXXVAGQYDKTGEYPW--PVVKKAWEVGLMNGHIPEHCG 429
F L DE+ AL++ R+F E+ A + DK + P KK + GL+ P G
Sbjct: 37 FGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYG 96
Query: 430 GMDMGVFDGCLVAEELAYGCTGI 498
G M F + EEL+ GI
Sbjct: 97 GSGMNYFSHVIAMEELSRAAGGI 119
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 78.2 bits (184), Expect = 6e-15
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = +3
Query: 516 SGLGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWIL 695
S L ++ G++EQ+KKYL +LI + A ++E AGSDV +K RAEKKGD+++L
Sbjct: 127 SNLCINQIVRNGSEEQRKKYLPKLISGEHMGALAMSEAQAGSDVVSMKLRAEKKGDKYVL 186
Query: 696 NGPKMWITNGGVANWYFVLART 761
NG K WITNG A+ V A+T
Sbjct: 187 NGTKFWITNGPDADVLVVYAKT 208
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 256 FELTDEQKALQELARKFTKDEIXXVAGQYDKTGEYPW--PVVKKAWEVGLMNGHIPEHCG 429
F L DE+ AL++ R+F E+ A + DK + P KK + GL+ P G
Sbjct: 37 FGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGITAPAEYG 96
Query: 430 GMDMGVFDGCLVAEELAYGCTGI 498
G M F + EEL+ GI
Sbjct: 97 GSGMNYFSHVIAMEELSRAAGGI 119
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 76.2 bits (179), Expect = 3e-14
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +3
Query: 531 TPVIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGPK 707
TP + G+ ++++L I LV++ V+EP AGSDV+ + T A ++G + I+NG K
Sbjct: 151 TPALAQFGSDALRERFLRPSITGDLVSSLAVSEPHAGSDVSAVHTHARRQGSDLIINGSK 210
Query: 708 MWITNGGVANWYFVLARTIRTLNVRPAK 791
MWITNGG A+W VL T T NV K
Sbjct: 211 MWITNGGQADWACVLVNTSNTSNVHKNK 238
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/75 (42%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +3
Query: 534 PVIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGPKM 710
P+II G +EQ++KYL +++ E + ++ ++E G+GSD +KT A+K GD+++++G KM
Sbjct: 131 PLIIQLGTEEQKQKYLPKIVTEA-IGSFALSETGSGSDAFALKTTAKKDGDDFVISGSKM 189
Query: 711 WITNGGVANWYFVLA 755
WITN G A ++ V A
Sbjct: 190 WITNAGHAQFFLVFA 204
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/74 (32%), Positives = 37/74 (50%)
Frame = +1
Query: 259 ELTDEQKALQELARKFTKDEIXXVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMD 438
+L++E+ ++ R+F + I + + D + V+ +E GLM IPE GG
Sbjct: 39 QLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQMHQSVITGTFENGLMGIEIPEKYGGPG 98
Query: 439 MGVFDGCLVAEELA 480
FD LV EELA
Sbjct: 99 SSFFDAVLVIEELA 112
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 71.3 bits (167), Expect = 7e-13
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +3
Query: 531 TPVIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGPK 707
TP + G+ + ++L I+ LV++ V+EP AGSDV+ I+T A + G + I+NG K
Sbjct: 117 TPALAQFGSDSLRNRFLRPSINGDLVSSIAVSEPHAGSDVSAIRTHARRYGSDLIINGSK 176
Query: 708 MWITNGGVANWYFVLARTIRTLNVRPAK 791
MWITNG A+W VL T N+ K
Sbjct: 177 MWITNGDQADWACVLVNTSNAKNLHKNK 204
Score = 31.5 bits (68), Expect = 0.72
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Frame = +1
Query: 232 ANTDNRLFFELTDEQK-ALQELARKFTKDEIXXVAGQYDKTGEYPWP-VVKKAWEVGLMN 405
A T + + + DE A+Q K K++I Q++K+G YP V K ++G+
Sbjct: 14 ATTSSTVKHMIYDEPHFAMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFA 73
Query: 406 GHIPEHCGGMDMGVFDGCLVAEEL-AYGCTGI-MTARKPVDLAKLPSLLLEIRSSRRNIW 579
+ P GG +AE++ A C I M+ D++ P+L S RN +
Sbjct: 74 VNKPVDYGGTGRDFAMSIAIAEQIGAVDCGSIPMSVMVQSDMS-TPALAQFGSDSLRNRF 132
Query: 580 VD*STN 597
+ S N
Sbjct: 133 LRPSIN 138
>U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical
protein E04F6.5b protein.
Length = 408
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +3
Query: 522 LGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGD--EWIL 695
+G +++ G Q++KYL L AA+ +TEP GSD + ++TRAE D ++L
Sbjct: 153 IGYKGILLEGTDAQKQKYLPDLATGRKFAAFALTEPTTGSDASSVRTRAELSADGKHYVL 212
Query: 696 NGPKMWITNGGVANWYFVLART 761
NG K+WI+NGG A+ + V A+T
Sbjct: 213 NGGKIWISNGGFADVFTVFAQT 234
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 69.3 bits (162), Expect = 3e-12
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +3
Query: 522 LGQTPVIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGD--EWIL 695
+G +++ G Q++KYL L AA+ +TEP GSD + ++TRAE D ++L
Sbjct: 153 IGYKGILLEGTDAQKQKYLPDLATGRKFAAFALTEPTTGSDASSVRTRAELSADGKHYVL 212
Query: 696 NGPKMWITNGGVANWYFVLART 761
NG K+WI+NGG A+ + V A+T
Sbjct: 213 NGGKIWISNGGFADVFTVFAQT 234
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 68.5 bits (160), Expect = 5e-12
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = +3
Query: 537 VIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGPKMWI 716
+I G +EQ+ KYL RL + L A++ ++E GAGSD +KT A++ GD ++++G KMWI
Sbjct: 48 IIDYGTEEQKLKYLPRLCSDSL-ASFCISESGAGSDAFALKTIAKRDGDHFLISGTKMWI 106
Query: 717 TNGGVANWYFVLA 755
TN G A + V A
Sbjct: 107 TNSGEAQVFVVFA 119
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 400 MNGHIPEHCGGMDMGVFDGCLVAEELA 480
M H+PE GG F+ +V EELA
Sbjct: 1 MGVHVPEEYGGSGSSFFNAMIVIEELA 27
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 68.5 bits (160), Expect = 5e-12
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = +3
Query: 537 VIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGPKMWI 716
+I G +EQ+ KYL RL + L A++ ++E GAGSD +KT A++ GD ++++G KMWI
Sbjct: 141 IIDYGTEEQKLKYLPRLCSDSL-ASFCISESGAGSDAFALKTIAKRDGDHFLISGTKMWI 199
Query: 717 TNGGVANWYFVLA 755
TN G A + V A
Sbjct: 200 TNSGEAQVFVVFA 212
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +1
Query: 262 LTDEQKALQELARKFTKDEIXXVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDM 441
LT+ + + RKF+KD + + + DK + V + +E GLM H+PE GG
Sbjct: 48 LTENELFFADTVRKFSKDVVKPLVREMDKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGS 107
Query: 442 GVFDGCLVAEELA 480
F+ +V EELA
Sbjct: 108 SFFNAMIVIEELA 120
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 534 PVIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGPKM 710
P+II G ++Q++KYL + V ++ ++E G+GSD +KT A+K GD++++NG KM
Sbjct: 66 PLIIELGTEKQKEKYLPKCYTSS-VGSFALSETGSGSDAFALKTTAKKDGDDYVINGSKM 124
Query: 711 WITNGGVANWYFVLA 755
WI+N + + V A
Sbjct: 125 WISNSEQSETFLVFA 139
Score = 35.9 bits (79), Expect = 0.034
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +1
Query: 343 DKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDMGVFDGCLVAEELA 480
D+T E V+ +E GLM +PE GG FD LV EE++
Sbjct: 2 DRTSEMTPAVINGCFENGLMGIEVPEKYGGPGATFFDAALVIEEIS 47
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +3
Query: 603 VAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGPKMWITNGGVANWYFVLAR 758
+ +Y +TEP AGSD A I+T A KKGD +++NG K +I+ G +N YFV+ R
Sbjct: 141 LGSYCLTEPDAGSDAASIRTTATKKGDYYVVNGSKAFISGAGTSNNYFVMMR 192
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +1
Query: 289 ELARKFTKDEIXXVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDMGVFDGCLVA 468
E A +F K E+ +DK GE P V++KA E+G + GG + ++
Sbjct: 36 EAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDHGGSGLSRLHASVIF 95
Query: 469 EELAYGC 489
E+L+ GC
Sbjct: 96 EQLSMGC 102
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 58.0 bits (134), Expect = 7e-09
Identities = 29/69 (42%), Positives = 47/69 (68%)
Frame = +3
Query: 549 GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWILNGPKMWITNGG 728
GN+E ++KYL +L + V A+ ++E +GSD ++T A+K GD +ILNG K I+N
Sbjct: 133 GNEELKEKYLKKLCKDS-VGAFALSEVVSGSDAFAMQTVAKKDGDHFILNGSKWGISNAP 191
Query: 729 VANWYFVLA 755
+A+++ VLA
Sbjct: 192 IADFFLVLA 200
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +1
Query: 262 LTDEQKALQELARKFTKDEIXXVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDM 441
L + +K L E + F + + + + D+ ++KKA+++ LM I GG +
Sbjct: 36 LNENEKKLVEKVKNFAQSSVKPLVREMDRDARINKQLLKKAFDLKLMGLKIDPKYGGSGV 95
Query: 442 GVFDGCLVAEELA 480
F+ L EEL+
Sbjct: 96 SFFELVLAVEELS 108
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 57.6 bits (133), Expect = 1e-08
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Frame = +3
Query: 429 WYGHGCV*WLSCG*GACIRMHRNYDRKEASGLG-QTPVIIA-----GNKEQQKKYLGRLI 590
+ G+GC + G G R D S + QT ++I G+++Q++KY+ L
Sbjct: 82 YQGYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLA 141
Query: 591 DEPLVAAYGVTEPGAGSDVAGIKTRA--EKKGDEWILNGPKMWITNGGVANWYFVLARTI 764
+ +G+TEP GS+ G++T+A ++ + LNG K WI+N V++ V AR+
Sbjct: 142 SGKKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLNGSKTWISNSPVSDVMVVWARSA 201
Query: 765 RTLN 776
R N
Sbjct: 202 RHNN 205
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 510 EASGLGQTPVIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPG-AGSDVAGIKTRAEKKGD 683
+A G V+I G++EQ+ K+L L++ + + + +TEP A SD I+ + G+
Sbjct: 682 QAPDTGNMEVLIKYGSEEQKSKWLTPLLNGEIKSCFAMTEPDVASSDATNIQGSIVRVGN 741
Query: 684 EWILNGPKMWITN 722
E+I+N K +I+N
Sbjct: 742 EYIINARKWFISN 754
>Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical
protein F08A8.3 protein.
Length = 660
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +3
Query: 534 PVIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGD--EWILNGP 704
P ++A ++EQQ+K+LGR + ++ Y TE G G+++ ++T A D E+ILN P
Sbjct: 119 PTLVAQASQEQQEKWLGRARRKEIIGCYAQTEMGHGTNLRKLETTATYSPDTQEFILNTP 178
>Z99710-5|CAB16866.1| 662|Caenorhabditis elegans Hypothetical
protein F08A8.4 protein.
Length = 662
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Frame = +3
Query: 534 PVIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGD--EWILNGP 704
P +++ +KEQQ+K+LGR ++ Y TE G G+++ ++T A D E++LN P
Sbjct: 121 PALVSQASKEQQEKWLGRARRREIIGCYAQTEMGHGTNLRKLETTATYFPDTQEFVLNTP 180
>U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical
protein C17C3.12c protein.
Length = 220
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +3
Query: 654 IKTRAEKKGDEWILNGPKMWITNGGVANWYFVLA 755
++T A+K GD +ILNG K I+N +A+++ VLA
Sbjct: 1 MQTVAKKDGDHFILNGSKWGISNAPIADFFLVLA 34
>AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical
protein Y75B8A.6 protein.
Length = 373
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 472 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPP 350
P PQ HP P+H V S P LQ A+ TPP
Sbjct: 15 PPPQMLQMHHPLPHHVAVFAHGSSSQNSQAPPLQAASATPP 55
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 485 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PATXMIS 315
P + S + PS +P S P S P PTS ++ T YSP SY P++ S
Sbjct: 1607 PVSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYS 1662
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -2
Query: 485 PYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PATXMIS 315
P + S + PS +P S P S P PTS ++ T YSP SY P++ S
Sbjct: 1614 PVSPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYS 1669
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +3
Query: 471 GAC--IRMHRN-YDRKEASGLGQTPVIIAGNKEQQK 569
G+C ++M +N YD G+G T VI + N E++K
Sbjct: 590 GSCANLQMEKNRYDSNNIDGIGSTLVITSENNEKKK 625
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 494 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 381
P HPY+ SS P++ + PPQ I PT QA
Sbjct: 87 PSHPYSISSQQSSPAHPSSAFPPQWP-----ITPTDQA 119
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 494 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 381
P HPY+ SS P++ + PPQ I PT QA
Sbjct: 87 PSHPYSISSQQSSPAHPSSAFPPQWP-----ITPTDQA 119
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 494 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 381
P HPY+ SS P++ + PPQ I PT QA
Sbjct: 132 PSHPYSISSQQSSPAHPSSAFPPQWP-----ITPTDQA 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,672,157
Number of Sequences: 27780
Number of extensions: 418562
Number of successful extensions: 1208
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -