Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021161
(753 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-09
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 60 3e-09
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 54 9e-08
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 52 4e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 47 4e-07
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 52 5e-07
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 42 5e-04
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 42 5e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 41 0.001
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 34 0.11
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 32 0.57
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 31 1.3
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 1.8
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 30 2.3
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 29 4.1
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011) 29 4.1
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 28 9.4
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 76.6 bits (180), Expect = 2e-14
Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Frame = +1
Query: 241 PRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYKNNHEVTVSGVEVHNPIQYFEEANFPD 420
P + +PFNKNFY+ HP + K+S E+++ + + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 421 YVQQGVKTMGYKEPTPIQAQGWPIAMSGK--I*LAYSNGFRQNVGLHLASHCAHKQPTAY 594
+ ++ + Y +PT IQ Q PIA+SG+ I +A + + L A QP
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586
Query: 595 SER*WSDCLVLAPTRELAQQIQQVAADF 678
L+ APTREL QQI A F
Sbjct: 587 VGD-GPIVLICAPTRELCQQIYTEARRF 613
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPI 616
+TGSGKT A++ PA+VHI +QP ++ GDGPI
Sbjct: 562 KTGSGKTAAFLWPALVHIMDQPELQVGDGPI 592
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 57.2 bits (132), Expect(2) = 1e-09
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYKNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
V QPF K+FY P + K +P E +E++ + E + V G P++ + + +
Sbjct: 59 VVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILD 118
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
+K Y++PTPIQAQ P+ MSG+
Sbjct: 119 VLKKNSYEKPTPIQAQAIPVIMSGR 143
Score = 23.0 bits (47), Expect(2) = 1e-09
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 619 LVLAPTRELAQQIQQVAADF 678
+V+ PTRELA QI + F
Sbjct: 148 IVMTPTRELAIQIHRECKKF 167
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 59.7 bits (138), Expect = 3e-09
Identities = 26/56 (46%), Positives = 37/56 (66%)
Frame = +1
Query: 313 RSPYEVEEYKNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 480
R +EV+ Y+ + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 551 YILPAIVHINNQPPIRRGDGPIAWSWRLPES*HNKFSKLLQIFGHTSYVRNTCVF 715
+ILP IVHIN+QP ++ GDGPI + ++ G +R+TC++
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIY 167
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYKNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 465
Y HPT+ + +V++ ++ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 466 PIQAQGWPIAMSGK 507
PIQ Q P+ +SG+
Sbjct: 221 PIQMQVLPVLLSGR 234
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 52.4 bits (120), Expect = 4e-07
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Frame = +1
Query: 271 FNKNFYDPHPTVLKRSPYEVEEYKNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 450
F ++YD + V + S V+E + + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 451 YKEPTPIQAQGWPIAMSGK--I*LAYS-NGFRQNVGLHLASHCAHKQPTAYSER*WSDCL 621
++ PTPIQ Q MSG+ I LA + +G L L K P+ + L
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDT--PVAL 149
Query: 622 VLAPTRELAQQI 657
+L PTREL QQ+
Sbjct: 150 ILTPTRELMQQV 161
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 47.2 bits (107), Expect(2) = 4e-07
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 325 EVEEYKNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 492
++ +++ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 493 AMSG 504
G
Sbjct: 197 MAHG 200
Score = 24.6 bits (51), Expect(2) = 4e-07
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +1
Query: 619 LVLAPTRELAQQI 657
+V++PTRELAQQI
Sbjct: 209 VVVSPTRELAQQI 221
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 52.0 bits (119), Expect = 5e-07
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Frame = +1
Query: 337 YKNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*L 516
++ + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + + +
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 517 AYSNGFRQNVGLHLASHCAHKQPTAYSER-----*WSDCLVLAPTRELAQQIQQVAADF 678
+ ER L+LAPTRELAQQI++ F
Sbjct: 143 GVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKF 201
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRR 601
+TGSGKT A+ +P +V I P I R
Sbjct: 146 ETGSGKTAAFAIPLLVWIMGLPKIER 171
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 50.0 bits (114), Expect = 2e-06
Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Frame = +1
Query: 352 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYS-N 528
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G+ +A +
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 529 GFRQNVGLHL----ASHCAHKQPTAYSER*WSDCLVLAPTRELAQQIQQVAADF 678
G + L + A +++SE + +APTRELA QI A F
Sbjct: 758 GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKF 811
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = +1
Query: 361 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYSNGFRQ 540
VSG I F E F + + + GY+ PTP+Q PI M+G+ +A +
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 541 NVGLHLASHCAHKQPTAYSER*WSD-CLVLAPTRELAQQIQQVAADFWTH 687
++ + S L +APTRELA+QI A F H
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDH 578
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQ 586
QTGSGKT AY+LP + + Q
Sbjct: 524 QTGSGKTAAYMLPVLTSLIKQ 544
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/98 (27%), Positives = 44/98 (44%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYSNGFRQNVGLHLASHCAH 576
FE+ + G+ G+ +P+PIQ + P+A++G+ LA + +L
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 577 KQPTAYSER*WSDCLVLAPTRELAQQIQQVAADFWTHI 690
T + LVL PTRELA Q Q+ + H+
Sbjct: 109 TDTT----KNCIQALVLVPTRELALQTSQICIELGKHM 142
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/98 (27%), Positives = 44/98 (44%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYSNGFRQNVGLHLASHCAH 576
FE+ + G+ G+ +P+PIQ + P+A++G+ LA + +L
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 577 KQPTAYSER*WSDCLVLAPTRELAQQIQQVAADFWTHI 690
T + LVL PTRELA Q Q+ + H+
Sbjct: 109 TDTT----KNCIQALVLVPTRELALQTSQICIELGKHM 142
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +1
Query: 352 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G+
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGR 172
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/30 (63%), Positives = 22/30 (73%), Gaps = 3/30 (10%)
Frame = +1
Query: 586 TAYSER*WSDC---LVLAPTRELAQQIQQV 666
T Y ++ DC LVLAPTRELAQQIQ+V
Sbjct: 149 TNYKDKNGCDCCQALVLAPTRELAQQIQKV 178
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/93 (26%), Positives = 39/93 (41%)
Frame = +1
Query: 388 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYSNGFRQNVGLHLASH 567
++ F + G+ G+ PT IQ QG P+A+SG+ L + L
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 568 CAHKQPTAYSER*WSDCLVLAPTRELAQQIQQV 666
++ LV++PTRELA Q +V
Sbjct: 109 IETLWRQKWTSMDGLGALVISPTRELAYQTFEV 141
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 31.9 bits (69), Expect = 0.57
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +1
Query: 430 QGVKTMGYKEPTPIQAQGWPIAMSGK---I*LAYSNGFRQNVGLHLASHCAHKQPTAYSE 600
+ V +G+ PTPIQA P+A+ GK A G L + ++ + +
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAI 82
Query: 601 R*WSDCLVLAPTRELAQQ 654
R LV+ PTRELA Q
Sbjct: 83 R----VLVITPTRELAIQ 96
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 373 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 486
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 388 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
I FE+ + + + V GYK+PTP+Q PI + GK
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPI-VKGK 912
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPP 592
QTGSGKT A+++P + I + P
Sbjct: 920 QTGSGKTAAFLIPILSRIYMEGP 942
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Frame = +1
Query: 349 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK--I* 513
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNM 145
Query: 514 LAYSNGFRQNVGLHLASHCAHKQPTAYSER*WSDCLVLAPTRELAQQIQQVAADFWTH 687
+A S + + + T + + + L+PT ELA+Q +VA H
Sbjct: 146 IAQSQSGTGKTAAFVLTMLSRVDAT----KPYPQVICLSPTYELARQTGKVAEAMGKH 199
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = +1
Query: 430 QGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYSNGFRQNVGLHLASHCAHKQPTAYSER*W 609
QG+K MG+ T IQ + + G+ L + L + R
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNG 644
Query: 610 SDCLVLAPTRELAQQIQQVAADFWTH 687
+ ++++PTREL+ Q VA D H
Sbjct: 645 TGVIIISPTRELSLQTYGVARDLLKH 670
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 283 FYDPHPTVLKRSPYEVEEYKNN--HEVTVSGVEVHNPIQYFEEANFPDY 423
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRG 604
QTGSGKTLAY+ P +VH + R G
Sbjct: 423 QTGSGKTLAYLAP-LVHRLREDEERHG 448
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 619 LVLAPTRELAQQIQQV 666
LVL+PTRELA QIQ+V
Sbjct: 7 LVLSPTRELANQIQKV 22
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 619 LVLAPTRELAQQIQQV 666
LVL+PTRELA QIQ+V
Sbjct: 69 LVLSPTRELANQIQKV 84
>SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)
Length = 1199
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 227 QNMRRPDWDLFHSNLSTKTFMIHILQFSKD 316
+N RR WD FHSN+S + H+ F D
Sbjct: 768 RNKRR--WDSFHSNVSADSGSAHMFDFDTD 795
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 524 QTGSGKTLAYILPAIVHI 577
+TGSGKTLA+ +P I HI
Sbjct: 176 ETGSGKTLAFGIPIIQHI 193
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 233 CSDLQRILFSHQILQILQIYCHRC-QIETN 147
CS +L +IL+ +YC +C Q ETN
Sbjct: 14 CSLCSEVLTEPKILRCFHVYCQKCLQAETN 43
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 164 CQIETNYRRICCLLQIWN-HRFHGYYSS 84
C + +YRR CC L +W H + Y+SS
Sbjct: 218 CCVRVDYRRKCC-LHVWRVHTTNTYWSS 244
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,338,296
Number of Sequences: 59808
Number of extensions: 470040
Number of successful extensions: 1186
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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