Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021161
(753 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 53 3e-09
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.3
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 23 2.3
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 9.4
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 9.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 9.4
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 9.4
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 52.8 bits (121), Expect = 3e-09
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Frame = +1
Query: 343 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAY 522
+N +V VSG V PI+ FE A + V +K GYK+PTP+Q PI M+G+ +A
Sbjct: 180 DNIQVNVSGDNVPQPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMAC 239
Query: 523 S---NGFRQNVGLHLASHCAHKQPTAYSER*WSD--CLVLAPTRELAQQIQQVAADF 678
+ +G + + + + + + ++++PTREL QI Q F
Sbjct: 240 AQTGSGKTAAFAVPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKF 296
Score = 25.0 bits (52), Expect = 0.76
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 524 QTGSGKTLAYILPAI 568
QTGSGKT A+ +P I
Sbjct: 241 QTGSGKTAAFAVPII 255
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 462 DAYSSSRLADSYVWKDLVGVLKRVPA 539
++ S + A +YVWK+ G L++ P+
Sbjct: 205 ESISYEQTAITYVWKNDEGTLRKSPS 230
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 462 DAYSSSRLADSYVWKDLVGVLKRVPA 539
++ S + A +YVWK+ G L++ P+
Sbjct: 205 ESISYEQTAITYVWKNDEGTLRKSPS 230
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 462 DAYSSSRLADSYVWKDLVGVLKRVPA 539
++ S + A +YVWK+ G L++ P+
Sbjct: 256 ESISYEQTAITYVWKNDEGTLRKSPS 281
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 462 DAYSSSRLADSYVWKDLVGVLKRVPA 539
++ S + A +YVWK+ G L++ P+
Sbjct: 205 ESISYEQTAITYVWKNDEGTLRKSPS 230
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -3
Query: 679 KNLQQLAEFVVLTLW*APRPSNRTITSPNRRLVVYVHNGWQ 557
K++Q++ + +W R N T PN L V+ + WQ
Sbjct: 134 KSVQRIKPYDEYYVWRDARIVNGTRQPPNNWLSVFWGSAWQ 174
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/16 (37%), Positives = 8/16 (50%)
Frame = -3
Query: 250 PIWATHVLTSREFFFP 203
P+W H+ R FP
Sbjct: 634 PVWGRHIYDGRAMGFP 649
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 608 HHLSE*AVGCLCAQWLARCRPTFCRNPFEYA 516
+++SE V L + +PT N FEYA
Sbjct: 180 NYMSELTVDILLETAMGVSKPTRDHNAFEYA 210
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 84 TGIIAVETVVPNLEEATNSA 143
T + A V P +EE TN+A
Sbjct: 412 TALGAAALVAPGMEEPTNTA 431
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/16 (37%), Positives = 8/16 (50%)
Frame = -3
Query: 250 PIWATHVLTSREFFFP 203
P+W H+ R FP
Sbjct: 634 PVWGRHIYDGRAMGFP 649
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,808
Number of Sequences: 438
Number of extensions: 4248
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -