Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021160
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   2.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.9  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +1

Query: 313 DAVSISLTWAHSNSTRATNILGTITAN 393
           + +S SL+ ++SNS  +TN++    +N
Sbjct: 320 EPISASLSTSNSNSPSSTNLIQNEASN 346


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +1

Query: 313 DAVSISLTWAHSNSTRATNILGTITAN 393
           + +S SL+ ++SNS  +TN++    +N
Sbjct: 109 EPISASLSTSNSNSPSSTNLIQNEASN 135


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +1

Query: 313 DAVSISLTWAHSNSTRATNILGTITAN 393
           + +S SL+ ++SNS  +TN++    +N
Sbjct: 109 EPISASLSTSNSNSPSSTNLIQNEASN 135


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 482 LVCELYIFIS*VNLPFVILTC-YYYY*SCRLFAV 384
           L+C  Y + +     F+IL C YY+Y +  +F V
Sbjct: 97  LLCTYYFYYA-----FIILLCVYYFYYAFIIFTV 125


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 600 LKTKLSYVAYERSDIFNTC 544
           LK  L + +Y+R+ IF TC
Sbjct: 118 LKHMLIWKSYKRTQIFITC 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,726
Number of Sequences: 336
Number of extensions: 2738
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)