Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021159
         (680 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F21AE4 Cluster: PREDICTED: hypothetical protein;...    33   8.5  
UniRef50_Q66S84 Cluster: Enteropeptidase-like protein; n=1; Oiko...    33   8.5  
UniRef50_P26366 Cluster: N-acetylmuramoyl-L-alanine amidase amiB...    33   8.5  

>UniRef50_UPI0000F21AE4 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 945

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -1

Query: 413 IRLVKTLLLVCHTPVQVSWESISVARGFQKFRITLAVFHRKNP 285
           I+  K+L ++CH PV   W S +V +   K +I + + H+ NP
Sbjct: 331 IKQSKSLFIMCHIPV-FCWISATVLQNVLKEKINIELEHKTNP 372


>UniRef50_Q66S84 Cluster: Enteropeptidase-like protein; n=1;
           Oikopleura dioica|Rep: Enteropeptidase-like protein -
           Oikopleura dioica (Tunicate)
          Length = 1303

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 25/74 (33%), Positives = 34/74 (45%)
 Frame = +3

Query: 315 NPEFLKTTCYRDRLPGHLDRRVAHQ*KRLDKANLLTPGSSRSDNPGQHSEALKVDKILKI 494
           NP F  T+   D LP H  RR A        +N L P SSR +  G++ ++ K +    I
Sbjct: 548 NPHFDHTSWLFDDLPAHRRRRQA---AGFSFSNPLPPTSSRKNKKGKNKKSEKAEFPSSI 604

Query: 495 FGVIFS*SKSTTPL 536
           F    S +KS   L
Sbjct: 605 FTANLSPAKSEAVL 618


>UniRef50_P26366 Cluster: N-acetylmuramoyl-L-alanine amidase amiB
           precursor; n=42; Enterobacteriaceae|Rep:
           N-acetylmuramoyl-L-alanine amidase amiB precursor -
           Salmonella typhimurium
          Length = 439

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = -1

Query: 416 KIRLVKTLLLVCHTPVQVSWESISVARGFQKFRITLAVFHRKNPGYSPEGRARRTII*TP 237
           K  ++  L+L+C      S   I V+ G Q+ RITL+        YS +G  +RT+    
Sbjct: 6   KNAVIAALILLCAQAGAASLSDIQVSNGEQQARITLSFIGEPEYAYSQDG--KRTVALDI 63

Query: 236 KKWGVV 219
           ++ GV+
Sbjct: 64  RQTGVI 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,984,988
Number of Sequences: 1657284
Number of extensions: 14297281
Number of successful extensions: 29674
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29669
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)